Detail information of GWHGAAZE026639


Functional Annotation

DatabaseOrthologsE valueAnnotation
NrXP_009797729.10PREDICTED: BTB/POZ and MATH domain-containing protein 3-like isoform X1 [Nicotiana sylvestris]
Swissprottr|O22286|BPM3_ARATH0BTB/POZ and MATH domain-containing protein 3
trEMBLtr|F6HNU2|F6HNU2_VITVI0Putative uncharacterized protein {ECO:0000313|EMBL:CCB56312.1}
TAIR10AT2G39760.18E-145BTB/POZ/MATH-domains containing protein

Location And Transcript Sequence (JBrowse)

ScaffoldTypeStartEndStrand
GWHAAZE00000008gene79016147908140-
GWHAAZE00000008mRNA79016147908140-
GWHAAZE00000008exon79077647908140-
GWHAAZE00000008exon79036947904042-
GWHAAZE00000008exon79025087902778-
GWHAAZE00000008exon79016147901750-
GWHAAZE00000008CDS79077647908140-
GWHAAZE00000008CDS79036947904042-
GWHAAZE00000008CDS79025087902778-
GWHAAZE00000008CDS79016147901750-
Transcript Sequence

Network for GWHGAAZE026639

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist


Functional Module

Module IDFunction Annotation


Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF00917.27MATH391540.00047
PF00651.32BTB1832979.60E-27
Protein Sequence

Gene family

Gene familysubfamily
Ubiquitin Family3-box

KEGG pathway

KO Enzyme pathway mapID
K10523SPOP Hedgehog signaling pathway map04340
Hedgehog signaling pathway - flymap04341

Gene Ontology

GO term OntologyName
GO:0005515molecular_functionprotein binding

Expression pattern


Expression pattern detail

SRPSampleDescriptionTPM
SRP075780SRR3591705youngest leaf25.568
SRR3591706second leaf20.155
SRR3591707mature leaf14.492
SRR3591708Shoot apex31.956
SRR3591709Stem24.782
SRR3591710White floral bud28.708
SRR3591711White flower32.727
SRR3591712Green floral bud26.427
SRR3591713Yellow flower31.976
SRP173429 SRR8316895Juvenile bud stage 18.936
SRR8316896Juvenile bud stage 26.855
SRR8316897Juvenile bud stage 10.891
SRR8316894Third green stage 8.648
SRR8316900Third green stage 26.203
SRR8316901Third green stage 25.998
SRR8316898Complete white stage 10.024
SRR8316899Complete white stage 32.220
SRR8316903Complete white stage 20.463
SRR8316902Silver flowering stage14.346
SRR8316904Silver flowering stage21.197
SRR8316905Silver flowering stage10.442
SRR8316906Gold flowering stage 30.777
SRR8316907Gold flowering stage 32.870
SRR8316908Gold flowering stage 36.888
SRP132670SRR6706286Control26.271
SRR6706287Light intensity 50%24.847
SRR6706288Light intensity 20%26.758
CNP0000432CNS0095592Slightly white alabastrum(diploid) 118.310
CNS0095593Slightly white alabastrum(diploid) 218.413
CNS0095594Slightly white alabastrum(diploid) 315.860
CNS0095595Whole white alabastrum(diploid) 216.401
CNS0095596Whole white alabastrum(diploid) 315.373
CNS0095597Whole white alabastrum(diploid) 415.159
CNS0095598Silvery flower (diploied) 115.498
CNS0095599Silvery flower (diploied) 226.555
CNS0095600Silvery flower (diploied) 332.255
CNS0095601Golden flower (diploid) 122.030
CNS0095602Golden flower (diploid) 234.676
CNS0095603Golden flower (diploid) 330.238
CNS0095604Slightly white alabastrum(tetraploid) 120.140
CNS0095605Slightly white alabastrum(tetraploid) 216.798
CNS0095606Slightly white alabastrum(tetraploid) 327.236
CNS0095607Whole white alabastrum(tetraploid) 118.143
CNS0095608Whole white alabastrum(tetraploid) 211.525
CNS0095609Whole white alabastrum(tetraploid) 319.324
CNS0095610Silvery flower (tetraploid) 130.471
CNS0095611Silvery flower (tetraploid) 227.192
CNS0095612Silvery flower (tetraploid) 331.042
CNS0095613Golden flower (tetraploid) 121.711
CNS0095614Golden flower (tetraploid) 225.747
CNS0095615Golden flower (tetraploid) 336.657
CRA001975CRR073297Stem 129.375
CRR073298Stem 224.708
CRR073299Stem 329.046
CRR073300Leaf 125.809
CRR073301Leaf 224.038
CRR073302Leaf 323.379
CRR073303Juvenile bud 124.696
CRR073304Juvenile bud 222.240
CRR073305Juvenile bud 329.449
CRR073306Third green 118.123
CRR073307Third green 218.850
CRR073308Third green 320.776
CRR073309Second white 132.881
CRR073310Second white 229.150
CRR073311Second white 329.013
CRR073312Silver flowering 129.979
CRR073313Silver flowering 238.287
CRR073314Silver flowering 333.182
CRR073315Gold flowering 115.388
CRR073316Gold flowering 217.229
CRR073317Gold flowering 313.400
CRR073318Tawny withering 127.613
CRR073319Tawny withering 224.748
CRR073320Tawny withering 321.261