Detail information of GWHGAAZE026472


Functional Annotation

DatabaseOrthologsE valueAnnotation
NrXP_007011385.10Serine/threonine protein kinase 2 isoform 1 [Theobroma cacao]
COGYP_006364000.15E-34two component serine/threonine-protein kinase with PASTA sensor
Swissprottr|Q39030|KPK2_ARATH0Serine/threonine-protein kinase AtPK2/AtPK19
trEMBLtr|A0A061FSD3|A0A061FSD3_THECC0Serine/threonine protein kinase 2 isoform 1 {ECO:0000313|EMBL:EOY20195.1}
TAIR10AT3G08720.24E-170serine/threonine protein kinase 2

Location And Transcript Sequence (JBrowse)

ScaffoldTypeStartEndStrand
GWHAAZE00000008gene51805845185523-
GWHAAZE00000008mRNA51805845185523-
GWHAAZE00000008exon51805845180871-
GWHAAZE00000008exon51816635181770-
GWHAAZE00000008exon51830675183240-
GWHAAZE00000008exon51837865183906-
GWHAAZE00000008exon51839895184071-
GWHAAZE00000008exon51842815184914-
GWHAAZE00000008exon51850015185071-
GWHAAZE00000008exon51851585185242-
GWHAAZE00000008exon51854565185523-
GWHAAZE00000008CDS51854565185523-
GWHAAZE00000008CDS51851585185242-
GWHAAZE00000008CDS51850015185071-
GWHAAZE00000008CDS51842815184914-
GWHAAZE00000008CDS51839895184071-
GWHAAZE00000008CDS51837865183906-
GWHAAZE00000008CDS51830675183240-
GWHAAZE00000008CDS51816635181770-
GWHAAZE00000008CDS51805845180871-
Transcript Sequence

Network for GWHGAAZE026472

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist


Functional Module

Module IDFunction Annotation


Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF00069.26Pkinase2184742.30E-73
Protein Sequence

Gene family

Gene familysubfamily
Protein Kinases FamilyAGC-Pl

KEGG pathway

KO Enzyme pathway mapID
K04688RPS6KB ErbB signaling pathway map04012
TGF-beta signaling pathwaymap04350
Apelin signaling pathwaymap04371
HIF-1 signaling pathwaymap04066
PI3K-Akt signaling pathwaymap04151
AMPK signaling pathwaymap04152
mTOR signaling pathwaymap04150
Autophagy - animalmap04140
Fc gamma R-mediated phagocytosismap04666
Insulin signaling pathwaymap04910
Axon regenerationmap04361
Longevity regulating pathwaymap04211
Longevity regulating pathway - wormmap04212
Longevity regulating pathway - multiple speciesmap04213
Thermogenesismap04714

Gene Ontology

GO term OntologyName
GO:0006468biological_processprotein phosphorylation
GO:0005524molecular_functionATP binding
GO:0004672molecular_functionprotein kinase activity
GO:0004674molecular_functionprotein serine/threonine kinase activity

Expression pattern


Expression pattern detail

SRPSampleDescriptionTPM
SRP075780SRR3591705youngest leaf4.302
SRR3591706second leaf1.448
SRR3591707mature leaf1.017
SRR3591708Shoot apex2.100
SRR3591709Stem4.950
SRR3591710White floral bud11.281
SRR3591711White flower33.485
SRR3591712Green floral bud5.343
SRR3591713Yellow flower50.268
SRP173429 SRR8316895Juvenile bud stage 10.290
SRR8316896Juvenile bud stage 10.889
SRR8316897Juvenile bud stage 11.775
SRR8316894Third green stage 3.702
SRR8316900Third green stage 7.699
SRR8316901Third green stage 8.193
SRR8316898Complete white stage 7.356
SRR8316899Complete white stage 4.049
SRR8316903Complete white stage 10.426
SRR8316902Silver flowering stage20.129
SRR8316904Silver flowering stage22.578
SRR8316905Silver flowering stage11.159
SRR8316906Gold flowering stage 29.180
SRR8316907Gold flowering stage 43.301
SRR8316908Gold flowering stage 39.131
SRP132670SRR6706286Control10.122
SRR6706287Light intensity 50%7.287
SRR6706288Light intensity 20%6.440
CNP0000432CNS0095592Slightly white alabastrum(diploid) 17.681
CNS0095593Slightly white alabastrum(diploid) 25.705
CNS0095594Slightly white alabastrum(diploid) 39.497
CNS0095595Whole white alabastrum(diploid) 29.582
CNS0095596Whole white alabastrum(diploid) 39.371
CNS0095597Whole white alabastrum(diploid) 48.755
CNS0095598Silvery flower (diploied) 15.825
CNS0095599Silvery flower (diploied) 210.582
CNS0095600Silvery flower (diploied) 323.826
CNS0095601Golden flower (diploid) 114.654
CNS0095602Golden flower (diploid) 227.101
CNS0095603Golden flower (diploid) 325.694
CNS0095604Slightly white alabastrum(tetraploid) 16.477
CNS0095605Slightly white alabastrum(tetraploid) 27.935
CNS0095606Slightly white alabastrum(tetraploid) 33.265
CNS0095607Whole white alabastrum(tetraploid) 18.228
CNS0095608Whole white alabastrum(tetraploid) 27.342
CNS0095609Whole white alabastrum(tetraploid) 38.531
CNS0095610Silvery flower (tetraploid) 130.135
CNS0095611Silvery flower (tetraploid) 213.485
CNS0095612Silvery flower (tetraploid) 323.602
CNS0095613Golden flower (tetraploid) 122.479
CNS0095614Golden flower (tetraploid) 219.410
CNS0095615Golden flower (tetraploid) 334.357
CRA001975CRR073297Stem 17.099
CRR073298Stem 26.581
CRR073299Stem 34.527
CRR073300Leaf 13.901
CRR073301Leaf 22.928
CRR073302Leaf 31.901
CRR073303Juvenile bud 12.653
CRR073304Juvenile bud 23.301
CRR073305Juvenile bud 31.545
CRR073306Third green 19.289
CRR073307Third green 26.240
CRR073308Third green 37.806
CRR073309Second white 18.776
CRR073310Second white 210.308
CRR073311Second white 311.341
CRR073312Silver flowering 127.960
CRR073313Silver flowering 225.806
CRR073314Silver flowering 331.264
CRR073315Gold flowering 10.933
CRR073316Gold flowering 20.420
CRR073317Gold flowering 30.178
CRR073318Tawny withering 12.799
CRR073319Tawny withering 28.151
CRR073320Tawny withering 31.726