Detail information of GWHGAAZE026469


Functional Annotation

DatabaseOrthologsE valueAnnotation
NrXP_009781128.11.0832E-160PREDICTED: hydroxyacylglutathione hydrolase cytoplasmic [Nicotiana sylvestris]
COGYP_003269737.13E-69hydroxyacylglutathione hydrolase
Swissprottr|O24496|GLO2C_ARATH8E-148Hydroxyacylglutathione hydrolase cytoplasmic
trEMBLtr|A0A022R5A6|A0A022R5A6_ERYGU3E-160Uncharacterized protein {ECO:0000313|EMBL:EYU35184.1}
TAIR10AT3G10850.12E-117Metallo-hydrolase/oxidoreductase superfamily protein

Location And Transcript Sequence (JBrowse)

ScaffoldTypeStartEndStrand
GWHAAZE00000008gene51286275133255-
GWHAAZE00000008mRNA51286275133255-
GWHAAZE00000008exon51286275128701-
GWHAAZE00000008exon51298005129976-
GWHAAZE00000008exon51300875130200-
GWHAAZE00000008exon51312615131339-
GWHAAZE00000008exon51315315131692-
GWHAAZE00000008exon51324255132565-
GWHAAZE00000008exon51332095133255-
GWHAAZE00000008CDS51332095133255-
GWHAAZE00000008CDS51324255132565-
GWHAAZE00000008CDS51315315131692-
GWHAAZE00000008CDS51312615131339-
GWHAAZE00000008CDS51300875130200-
GWHAAZE00000008CDS51298005129976-
GWHAAZE00000008CDS51286275128701-
Transcript Sequence

Network for GWHGAAZE026469

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist


Functional Module

Module IDFunction Annotation
CFinderModule0057GO:0019243 methylglyoxal catabolic process to D-lactate via S-lactoyl-glutathione GOslim:biological_process
GO:0004416 hydroxyacylglutathione hydrolase activity GOslim:molecular_function
GO:0016846 carbon-sulfur lyase activity GOslim:molecular_function
map00620 Pyruvate metabolism


Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF00753.28Lactamase_B171808.60E-06
PF16123.6HAGH_C1812623.20E-26
Protein Sequence

Gene family

Gene familysubfamily
----

KEGG pathway

KO Enzyme pathway mapID
K01069gloB, gloC, HAGH Metabolic pathways map01100
Pyruvate metabolismmap00620

Gene Ontology

GO term OntologyName
GO:0019243biological_processmethylglyoxal catabolic process to D-lactate via S-lactoyl-glutathione
GO:0004416molecular_functionhydroxyacylglutathione hydrolase activity

Expression pattern


Expression pattern detail

SRPSampleDescriptionTPM
SRP075780SRR3591705youngest leaf75.342
SRR3591706second leaf43.848
SRR3591707mature leaf46.289
SRR3591708Shoot apex76.317
SRR3591709Stem67.668
SRR3591710White floral bud64.459
SRR3591711White flower60.085
SRR3591712Green floral bud83.113
SRR3591713Yellow flower43.547
SRP173429 SRR8316895Juvenile bud stage 46.910
SRR8316896Juvenile bud stage 72.154
SRR8316897Juvenile bud stage 34.288
SRR8316894Third green stage 26.554
SRR8316900Third green stage 65.464
SRR8316901Third green stage 55.772
SRR8316898Complete white stage 16.766
SRR8316899Complete white stage 90.935
SRR8316903Complete white stage 31.031
SRR8316902Silver flowering stage11.260
SRR8316904Silver flowering stage15.220
SRR8316905Silver flowering stage5.690
SRR8316906Gold flowering stage 35.769
SRR8316907Gold flowering stage 31.902
SRR8316908Gold flowering stage 39.331
SRP132670SRR6706286Control114.853
SRR6706287Light intensity 50%111.613
SRR6706288Light intensity 20%117.099
CNP0000432CNS0095592Slightly white alabastrum(diploid) 172.345
CNS0095593Slightly white alabastrum(diploid) 284.958
CNS0095594Slightly white alabastrum(diploid) 372.330
CNS0095595Whole white alabastrum(diploid) 261.505
CNS0095596Whole white alabastrum(diploid) 360.131
CNS0095597Whole white alabastrum(diploid) 459.709
CNS0095598Silvery flower (diploied) 190.080
CNS0095599Silvery flower (diploied) 277.744
CNS0095600Silvery flower (diploied) 349.193
CNS0095601Golden flower (diploid) 190.699
CNS0095602Golden flower (diploid) 263.700
CNS0095603Golden flower (diploid) 362.122
CNS0095604Slightly white alabastrum(tetraploid) 166.832
CNS0095605Slightly white alabastrum(tetraploid) 256.980
CNS0095606Slightly white alabastrum(tetraploid) 393.717
CNS0095607Whole white alabastrum(tetraploid) 142.494
CNS0095608Whole white alabastrum(tetraploid) 233.621
CNS0095609Whole white alabastrum(tetraploid) 366.620
CNS0095610Silvery flower (tetraploid) 149.724
CNS0095611Silvery flower (tetraploid) 256.904
CNS0095612Silvery flower (tetraploid) 339.560
CNS0095613Golden flower (tetraploid) 137.210
CNS0095614Golden flower (tetraploid) 249.765
CNS0095615Golden flower (tetraploid) 319.311
CRA001975CRR073297Stem 168.575
CRR073298Stem 263.652
CRR073299Stem 389.379
CRR073300Leaf 168.764
CRR073301Leaf 272.001
CRR073302Leaf 370.611
CRR073303Juvenile bud 175.029
CRR073304Juvenile bud 238.830
CRR073305Juvenile bud 368.985
CRR073306Third green 18.967
CRR073307Third green 28.356
CRR073308Third green 312.319
CRR073309Second white 118.056
CRR073310Second white 212.862
CRR073311Second white 38.971
CRR073312Silver flowering 16.820
CRR073313Silver flowering 29.623
CRR073314Silver flowering 37.503
CRR073315Gold flowering 161.039
CRR073316Gold flowering 269.086
CRR073317Gold flowering 351.953
CRR073318Tawny withering 179.321
CRR073319Tawny withering 279.750
CRR073320Tawny withering 370.016