Detail information of GWHGAAZE026441


Functional Annotation

DatabaseOrthologsE valueAnnotation
NrADJ67441.13.3419E-106ethylene response factor 12 [Actinidia deliciosa]
Swissprottr|Q40479|ERF2_TOBAC1E-102Ethylene-responsive transcription factor 2
trEMBLtr|D8VD39|D8VD39_ACTDE1E-106Ethylene response factor 12 {ECO:0000313|EMBL:ADJ67441.1}
TAIR10AT4G17500.13E-37ethylene responsive element binding factor 1

Location And Transcript Sequence (JBrowse)

ScaffoldTypeStartEndStrand
GWHAAZE00000008gene47574404758285+
GWHAAZE00000008mRNA47574404758285+
GWHAAZE00000008exon47574404758285+
GWHAAZE00000008CDS47574404758285+
Transcript Sequence

Network for GWHGAAZE026441

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist


Functional Module

Module IDFunction Annotation


Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF00847.21AP21532033.00E-15
Protein Sequence

Gene family

Gene familysubfamily
Transcription Factors FamilyAP2/ERF-ERF

KEGG pathway

KO Enzyme pathway mapID
--------

Gene Ontology

GO term OntologyName
GO:0006355biological_processregulation of transcription, DNA-templated
GO:0003700molecular_functionDNA-binding transcription factor activity
GO:0003677molecular_functionDNA binding

Expression pattern


Expression pattern detail

SRPSampleDescriptionTPM
SRP075780SRR3591705youngest leaf31.448
SRR3591706second leaf13.031
SRR3591707mature leaf39.365
SRR3591708Shoot apex13.149
SRR3591709Stem180.630
SRR3591710White floral bud167.624
SRR3591711White flower364.103
SRR3591712Green floral bud38.949
SRR3591713Yellow flower267.659
SRP173429 SRR8316895Juvenile bud stage 48.218
SRR8316896Juvenile bud stage 23.738
SRR8316897Juvenile bud stage 29.121
SRR8316894Third green stage 5.230
SRR8316900Third green stage 10.118
SRR8316901Third green stage 18.487
SRR8316898Complete white stage 30.119
SRR8316899Complete white stage 108.751
SRR8316903Complete white stage 54.870
SRR8316902Silver flowering stage96.186
SRR8316904Silver flowering stage87.321
SRR8316905Silver flowering stage69.471
SRR8316906Gold flowering stage 190.937
SRR8316907Gold flowering stage 214.405
SRR8316908Gold flowering stage 199.953
SRP132670SRR6706286Control46.594
SRR6706287Light intensity 50%63.758
SRR6706288Light intensity 20%52.567
CNP0000432CNS0095592Slightly white alabastrum(diploid) 143.839
CNS0095593Slightly white alabastrum(diploid) 2100.664
CNS0095594Slightly white alabastrum(diploid) 383.371
CNS0095595Whole white alabastrum(diploid) 263.475
CNS0095596Whole white alabastrum(diploid) 310.408
CNS0095597Whole white alabastrum(diploid) 434.510
CNS0095598Silvery flower (diploied) 1307.314
CNS0095599Silvery flower (diploied) 2231.318
CNS0095600Silvery flower (diploied) 3264.374
CNS0095601Golden flower (diploid) 1310.010
CNS0095602Golden flower (diploid) 2287.847
CNS0095603Golden flower (diploid) 3290.494
CNS0095604Slightly white alabastrum(tetraploid) 116.160
CNS0095605Slightly white alabastrum(tetraploid) 217.544
CNS0095606Slightly white alabastrum(tetraploid) 343.269
CNS0095607Whole white alabastrum(tetraploid) 131.727
CNS0095608Whole white alabastrum(tetraploid) 29.843
CNS0095609Whole white alabastrum(tetraploid) 320.033
CNS0095610Silvery flower (tetraploid) 1155.236
CNS0095611Silvery flower (tetraploid) 2147.284
CNS0095612Silvery flower (tetraploid) 3197.637
CNS0095613Golden flower (tetraploid) 1199.502
CNS0095614Golden flower (tetraploid) 2108.968
CNS0095615Golden flower (tetraploid) 3328.429
CRA001975CRR073297Stem 122.009
CRR073298Stem 213.767
CRR073299Stem 316.261
CRR073300Leaf 18.353
CRR073301Leaf 25.515
CRR073302Leaf 312.426
CRR073303Juvenile bud 19.794
CRR073304Juvenile bud 233.507
CRR073305Juvenile bud 330.161
CRR073306Third green 1175.861
CRR073307Third green 2193.914
CRR073308Third green 3200.631
CRR073309Second white 196.614
CRR073310Second white 278.414
CRR073311Second white 364.612
CRR073312Silver flowering 175.023
CRR073313Silver flowering 276.815
CRR073314Silver flowering 349.059
CRR073315Gold flowering 1145.833
CRR073316Gold flowering 2207.501
CRR073317Gold flowering 3274.746
CRR073318Tawny withering 1268.624
CRR073319Tawny withering 2597.049
CRR073320Tawny withering 3273.794