Detail information of GWHGAAZE026427


Functional Annotation

DatabaseOrthologsE valueAnnotation
NrXP_010662269.10PREDICTED: ceramide kinase [Vitis vinifera]
COGYP_005069741.11E-10hypothetical protein
Swissprottr|Q6USK2|CERK_ARATH0Ceramide kinase
trEMBLtr|F6I2T2|F6I2T2_VITVI0Putative uncharacterized protein {ECO:0000313|EMBL:CCB61249.1}
TAIR10AT5G51290.11E-162Diacylglycerol kinase family protein

Location And Transcript Sequence (JBrowse)

ScaffoldTypeStartEndStrand
GWHAAZE00000008gene45356624547915+
GWHAAZE00000008mRNA45356624547915+
GWHAAZE00000008exon45356624535826+
GWHAAZE00000008exon45361874536378+
GWHAAZE00000008exon45364914536583+
GWHAAZE00000008exon45415614541653+
GWHAAZE00000008exon45423754542600+
GWHAAZE00000008exon45427034542729+
GWHAAZE00000008exon45432834543367+
GWHAAZE00000008exon45447804544929+
GWHAAZE00000008exon45458464545947+
GWHAAZE00000008exon45467284547038+
GWHAAZE00000008exon45474104547476+
GWHAAZE00000008exon45477594547915+
GWHAAZE00000008CDS45356624535826+
GWHAAZE00000008CDS45361874536378+
GWHAAZE00000008CDS45364914536583+
GWHAAZE00000008CDS45415614541653+
GWHAAZE00000008CDS45423754542600+
GWHAAZE00000008CDS45427034542729+
GWHAAZE00000008CDS45432834543367+
GWHAAZE00000008CDS45447804544929+
GWHAAZE00000008CDS45458464545947+
GWHAAZE00000008CDS45467284547038+
GWHAAZE00000008CDS45474104547476+
GWHAAZE00000008CDS45477594547915+
Transcript Sequence

Network for GWHGAAZE026427

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist


Functional Module

Module IDFunction Annotation


Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF00781.25DAGK_cat1181973.10E-17
Protein Sequence

Gene family

Gene familysubfamily
----

KEGG pathway

KO Enzyme pathway mapID
K04715CERK Sphingolipid metabolism map00600

Gene Ontology

GO term OntologyName
GO:0003951molecular_functionNAD+ kinase activity
GO:0016301molecular_functionkinase activity

Expression pattern


Expression pattern detail

SRPSampleDescriptionTPM
SRP075780SRR3591705youngest leaf14.484
SRR3591706second leaf5.241
SRR3591707mature leaf8.492
SRR3591708Shoot apex8.642
SRR3591709Stem29.445
SRR3591710White floral bud8.445
SRR3591711White flower9.279
SRR3591712Green floral bud11.402
SRR3591713Yellow flower3.367
SRP173429 SRR8316895Juvenile bud stage 5.621
SRR8316896Juvenile bud stage 7.629
SRR8316897Juvenile bud stage 3.646
SRR8316894Third green stage 3.258
SRR8316900Third green stage 9.328
SRR8316901Third green stage 6.817
SRR8316898Complete white stage 4.410
SRR8316899Complete white stage 16.712
SRR8316903Complete white stage 7.529
SRR8316902Silver flowering stage3.175
SRR8316904Silver flowering stage5.861
SRR8316905Silver flowering stage2.307
SRR8316906Gold flowering stage 6.354
SRR8316907Gold flowering stage 7.163
SRR8316908Gold flowering stage 6.246
SRP132670SRR6706286Control5.574
SRR6706287Light intensity 50%5.176
SRR6706288Light intensity 20%6.885
CNP0000432CNS0095592Slightly white alabastrum(diploid) 13.467
CNS0095593Slightly white alabastrum(diploid) 25.072
CNS0095594Slightly white alabastrum(diploid) 33.766
CNS0095595Whole white alabastrum(diploid) 25.089
CNS0095596Whole white alabastrum(diploid) 34.577
CNS0095597Whole white alabastrum(diploid) 44.561
CNS0095598Silvery flower (diploied) 19.426
CNS0095599Silvery flower (diploied) 25.272
CNS0095600Silvery flower (diploied) 39.725
CNS0095601Golden flower (diploid) 15.698
CNS0095602Golden flower (diploid) 26.856
CNS0095603Golden flower (diploid) 37.525
CNS0095604Slightly white alabastrum(tetraploid) 15.487
CNS0095605Slightly white alabastrum(tetraploid) 24.503
CNS0095606Slightly white alabastrum(tetraploid) 310.931
CNS0095607Whole white alabastrum(tetraploid) 13.391
CNS0095608Whole white alabastrum(tetraploid) 24.104
CNS0095609Whole white alabastrum(tetraploid) 37.143
CNS0095610Silvery flower (tetraploid) 16.939
CNS0095611Silvery flower (tetraploid) 29.533
CNS0095612Silvery flower (tetraploid) 36.666
CNS0095613Golden flower (tetraploid) 11.872
CNS0095614Golden flower (tetraploid) 23.901
CNS0095615Golden flower (tetraploid) 32.037
CRA001975CRR073297Stem 19.561
CRR073298Stem 29.448
CRR073299Stem 39.439
CRR073300Leaf 110.893
CRR073301Leaf 28.833
CRR073302Leaf 39.230
CRR073303Juvenile bud 18.076
CRR073304Juvenile bud 27.652
CRR073305Juvenile bud 310.863
CRR073306Third green 12.104
CRR073307Third green 21.864
CRR073308Third green 32.623
CRR073309Second white 12.542
CRR073310Second white 21.878
CRR073311Second white 32.862
CRR073312Silver flowering 10.579
CRR073313Silver flowering 20.802
CRR073314Silver flowering 30.810
CRR073315Gold flowering 16.584
CRR073316Gold flowering 29.201
CRR073317Gold flowering 33.892
CRR073318Tawny withering 120.590
CRR073319Tawny withering 217.201
CRR073320Tawny withering 333.731