Detail information of GWHGAAZE026339


Functional Annotation

DatabaseOrthologsE valueAnnotation
NrXP_007039430.11.3361E-177No lysine kinase 10 isoform 1 [Theobroma cacao]
COGYP_003797667.13E-20putative serine/threonine protein kinase
Swissprottr|Q944Q0|WNK8_ARATH1E-151Serine/threonine-protein kinase WNK8
trEMBLtr|A0A061G2W9|A0A061G2W9_THECC5E-178No lysine kinase 10 isoform 1 {ECO:0000313|EMBL:EOY23931.1}
TAIR10AT5G41990.13E-117with no lysine (K) kinase 8

Location And Transcript Sequence (JBrowse)

ScaffoldTypeStartEndStrand
GWHAAZE00000008gene30312653032953+
GWHAAZE00000008mRNA30312653032953+
GWHAAZE00000008exon30312653032953+
GWHAAZE00000008CDS30312653032953+
Transcript Sequence

Network for GWHGAAZE026339

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist


Functional Module

Module IDFunction Annotation


Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF00069.26Pkinase352909.60E-46
Protein Sequence

Gene family

Gene familysubfamily
Protein Kinases FamilyWNK_NRBP

KEGG pathway

KO Enzyme pathway mapID
--------

Gene Ontology

GO term OntologyName
GO:0006468biological_processprotein phosphorylation
GO:0004672molecular_functionprotein kinase activity
GO:0005524molecular_functionATP binding

Expression pattern

Created with Highcharts 5.0.4Chart context menuExpression pattern for GWHGAAZE026339.youngest leafsecond leafmature leafShoot apexStemWhite floral budWhite flowerGreen floral budYellow flowerJuvenile bud stage 1Juvenile bud stage 2Juvenile bud stage 3Third green stage 1Third green stage 2Third green stage 3Complete white stage 1Complete white stage 2Complete white stage 3Silver flowering stage 1Silver flowering stage 2Silver flowering stage 3Gold flowering stage 1Gold flowering stage 2Gold flowering stage 3Control 1Light intensity 50%Light intensity 20%Slightly white alabastrum(diploid) 1Slightly white alabastrum(diploid) 2Slightly white alabastrum(diploid) 3Whole white alabastrum(diploid) 1Whole white alabastrum(diploid) 2Whole white alabastrum(diploid) 3Silvery flower (diploied) 1Silvery flower (diploied) 2Silvery flower (diploied) 3Golden flower (diploid) 1Golden flower (diploid) 2Golden flower (diploid) 3Slightly white alabastrum(tetraploid) 1Slightly white alabastrum(tetraploid) 2Slightly white alabastrum(tetraploid) 3Whole white alabastrum(tetraploid) 1Whole white alabastrum(tetraploid) 2Whole white alabastrum(tetraploid) 3Silvery flower (tetraploid) 1Silvery flower (tetraploid) 2Silvery flower (tetraploid) 3Golden flower (tetraploid) 1Golden flower (tetraploid) 2Golden flower (tetraploid) 3Stem 1Stem 2Stem 3Leaf 1Leaf 2Leaf 3Juvenile bud 1Juvenile bud 2Juvenile bud 3Third green 1Third green 2Third green 3Second white 1Second white 2Second white 3Silver flowering 1Silver flowering 2Silver flowering 3Gold flowering 1Gold flowering 2Gold flowering 3Tawny withering 1Tawny withering 2Tawny withering 30246810121416182022Highcharts.com

Expression pattern detail

SRPSampleDescriptionTPM
SRP075780SRR3591705youngest leaf13.532
SRR3591706second leaf7.109
SRR3591707mature leaf11.224
SRR3591708Shoot apex9.971
SRR3591709Stem20.221
SRR3591710White floral bud14.895
SRR3591711White flower19.293
SRR3591712Green floral bud17.064
SRR3591713Yellow flower12.771
SRP173429 SRR8316895Juvenile bud stage 8.792
SRR8316896Juvenile bud stage 11.725
SRR8316897Juvenile bud stage 5.892
SRR8316894Third green stage 5.237
SRR8316900Third green stage 11.285
SRR8316901Third green stage 12.107
SRR8316898Complete white stage 4.919
SRR8316899Complete white stage 20.763
SRR8316903Complete white stage 8.249
SRR8316902Silver flowering stage6.818
SRR8316904Silver flowering stage7.433
SRR8316905Silver flowering stage4.706
SRR8316906Gold flowering stage 16.420
SRR8316907Gold flowering stage 12.185
SRR8316908Gold flowering stage 13.274
SRP132670SRR6706286Control7.824
SRR6706287Light intensity 50%6.778
SRR6706288Light intensity 20%8.799
CNP0000432CNS0095592Slightly white alabastrum(diploid) 112.205
CNS0095593Slightly white alabastrum(diploid) 212.698
CNS0095594Slightly white alabastrum(diploid) 313.917
CNS0095595Whole white alabastrum(diploid) 211.628
CNS0095596Whole white alabastrum(diploid) 310.211
CNS0095597Whole white alabastrum(diploid) 48.871
CNS0095598Silvery flower (diploied) 120.142
CNS0095599Silvery flower (diploied) 215.659
CNS0095600Silvery flower (diploied) 320.461
CNS0095601Golden flower (diploid) 115.351
CNS0095602Golden flower (diploid) 216.489
CNS0095603Golden flower (diploid) 316.247
CNS0095604Slightly white alabastrum(tetraploid) 110.677
CNS0095605Slightly white alabastrum(tetraploid) 210.884
CNS0095606Slightly white alabastrum(tetraploid) 311.647
CNS0095607Whole white alabastrum(tetraploid) 16.312
CNS0095608Whole white alabastrum(tetraploid) 25.174
CNS0095609Whole white alabastrum(tetraploid) 39.301
CNS0095610Silvery flower (tetraploid) 112.249
CNS0095611Silvery flower (tetraploid) 212.560
CNS0095612Silvery flower (tetraploid) 313.895
CNS0095613Golden flower (tetraploid) 19.043
CNS0095614Golden flower (tetraploid) 29.665
CNS0095615Golden flower (tetraploid) 312.087
CRA001975CRR073297Stem 113.502
CRR073298Stem 211.832
CRR073299Stem 310.447
CRR073300Leaf 115.625
CRR073301Leaf 211.254
CRR073302Leaf 312.154
CRR073303Juvenile bud 113.402
CRR073304Juvenile bud 210.913
CRR073305Juvenile bud 317.053
CRR073306Third green 15.829
CRR073307Third green 26.308
CRR073308Third green 35.529
CRR073309Second white 112.756
CRR073310Second white 210.426
CRR073311Second white 37.813
CRR073312Silver flowering 110.622
CRR073313Silver flowering 213.358
CRR073314Silver flowering 38.778
CRR073315Gold flowering 18.898
CRR073316Gold flowering 212.486
CRR073317Gold flowering 311.779
CRR073318Tawny withering 110.308
CRR073319Tawny withering 215.592
CRR073320Tawny withering 310.474