Detail information of GWHGAAZE026319


Functional Annotation

DatabaseOrthologsE valueAnnotation
NrKDP29235.12.05562E-90hypothetical protein JCGZ_16624 [Jatropha curcas]
COGYP_001435313.10.000000150S ribosomal protein L24
Swissprottr|Q9FUL4|RL24_PRUAV2E-8560S ribosomal protein L24
trEMBLtr|A0A067KAG6|A0A067KAG6_JATCU8E-91Uncharacterized protein {ECO:0000313|EMBL:KDP29235.1}
TAIR10AT3G53020.17E-55Ribosomal protein L24e family protein

Location And Transcript Sequence (JBrowse)

ScaffoldTypeStartEndStrand
GWHAAZE00000008gene26858882687693+
GWHAAZE00000008mRNA26858882687693+
GWHAAZE00000008exon26858882685962+
GWHAAZE00000008exon26861172686218+
GWHAAZE00000008exon26873012687449+
GWHAAZE00000008exon26875432687693+
GWHAAZE00000008CDS26858882685962+
GWHAAZE00000008CDS26861172686218+
GWHAAZE00000008CDS26873012687449+
GWHAAZE00000008CDS26875432687693+
Transcript Sequence

Network for GWHGAAZE026319

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist


Functional Module

Module IDFunction Annotation


Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF01246.21Ribosomal_L24e1637.60E-28
Protein Sequence

Gene family

Gene familysubfamily
----

KEGG pathway

KO Enzyme pathway mapID
K02896RP-L24e, RPL24 Ribosome map03010

Gene Ontology

GO term OntologyName

Expression pattern


Expression pattern detail

SRPSampleDescriptionTPM
SRP075780SRR3591705youngest leaf196.128
SRR3591706second leaf80.386
SRR3591707mature leaf31.287
SRR3591708Shoot apex243.652
SRR3591709Stem77.492
SRR3591710White floral bud106.441
SRR3591711White flower81.424
SRR3591712Green floral bud156.940
SRR3591713Yellow flower37.691
SRP173429 SRR8316895Juvenile bud stage 137.032
SRR8316896Juvenile bud stage 180.583
SRR8316897Juvenile bud stage 101.584
SRR8316894Third green stage 62.764
SRR8316900Third green stage 208.128
SRR8316901Third green stage 218.595
SRR8316898Complete white stage 34.921
SRR8316899Complete white stage 122.485
SRR8316903Complete white stage 54.433
SRR8316902Silver flowering stage28.210
SRR8316904Silver flowering stage30.832
SRR8316905Silver flowering stage12.233
SRR8316906Gold flowering stage 32.602
SRR8316907Gold flowering stage 40.721
SRR8316908Gold flowering stage 48.106
SRP132670SRR6706286Control203.510
SRR6706287Light intensity 50%194.676
SRR6706288Light intensity 20%215.172
CNP0000432CNS0095592Slightly white alabastrum(diploid) 1274.273
CNS0095593Slightly white alabastrum(diploid) 2282.074
CNS0095594Slightly white alabastrum(diploid) 3247.650
CNS0095595Whole white alabastrum(diploid) 2212.750
CNS0095596Whole white alabastrum(diploid) 3259.888
CNS0095597Whole white alabastrum(diploid) 4183.312
CNS0095598Silvery flower (diploied) 1119.789
CNS0095599Silvery flower (diploied) 2108.439
CNS0095600Silvery flower (diploied) 365.573
CNS0095601Golden flower (diploid) 1108.493
CNS0095602Golden flower (diploid) 268.333
CNS0095603Golden flower (diploid) 362.985
CNS0095604Slightly white alabastrum(tetraploid) 1256.329
CNS0095605Slightly white alabastrum(tetraploid) 2262.637
CNS0095606Slightly white alabastrum(tetraploid) 3265.044
CNS0095607Whole white alabastrum(tetraploid) 1157.963
CNS0095608Whole white alabastrum(tetraploid) 2150.321
CNS0095609Whole white alabastrum(tetraploid) 3217.559
CNS0095610Silvery flower (tetraploid) 158.794
CNS0095611Silvery flower (tetraploid) 259.896
CNS0095612Silvery flower (tetraploid) 357.031
CNS0095613Golden flower (tetraploid) 137.387
CNS0095614Golden flower (tetraploid) 252.411
CNS0095615Golden flower (tetraploid) 321.471
CRA001975CRR073297Stem 1208.643
CRR073298Stem 2211.729
CRR073299Stem 3214.533
CRR073300Leaf 1206.565
CRR073301Leaf 2247.367
CRR073302Leaf 3236.766
CRR073303Juvenile bud 1229.854
CRR073304Juvenile bud 2139.317
CRR073305Juvenile bud 3141.209
CRR073306Third green 128.394
CRR073307Third green 231.250
CRR073308Third green 330.488
CRR073309Second white 119.433
CRR073310Second white 225.462
CRR073311Second white 314.745
CRR073312Silver flowering 113.582
CRR073313Silver flowering 217.083
CRR073314Silver flowering 318.245
CRR073315Gold flowering 142.871
CRR073316Gold flowering 247.618
CRR073317Gold flowering 334.735
CRR073318Tawny withering 1155.479
CRR073319Tawny withering 2156.535
CRR073320Tawny withering 3151.653