Gene detail

Detail information of GWHGAAZE026297

Functional Annotation

Database	Orthologs	E value	Annotation
Nr	XP_002321921.1	0	hypothetical protein POPTR_0015s13020g [Populus trichocarpa]
COG	YP_007205235.1	3E-54	cytochrome P450
Swissprot	tr\|Q93Z79\|C14A1_ARATH	3E-103	Cytochrome P450 714A1
trEMBL	tr\|B9ID94\|B9ID94_POPTR	0	Uncharacterized protein {ECO:0000313\|EMBL:EEF06048.1}
TAIR10	AT5G52400.1	3E-176	cytochrome P450, family 715, subfamily A, polypeptide 1

Location And Transcript Sequence (JBrowse)

Scaffold	Type	Start	End	Strand
GWHAAZE00000008	gene	2328145	2331395	-
GWHAAZE00000008	mRNA	2328145	2331395	-
GWHAAZE00000008	exon	2331200	2331395	-
GWHAAZE00000008	exon	2330236	2330465	-
GWHAAZE00000008	exon	2329398	2329994	-
GWHAAZE00000008	exon	2328145	2328573	-
GWHAAZE00000008	CDS	2331200	2331395	-
GWHAAZE00000008	CDS	2330236	2330465	-
GWHAAZE00000008	CDS	2329398	2329994	-
GWHAAZE00000008	CDS	2328145	2328573	-

Transcript Sequence
>GWHTAAZE026331 ATGGCACATAGGAAGCTTAAGAGGAATGGGCTAAGTGGTCCAACTCCAAGTTTTCCTTTGGGGAATATTAGTGATATGAAGAAGAAGAAGAGTGATTATACTTCATTGTCCTCCTCTTCCTCTTTAGCCACTAGTAATCCACATGATATCCATTCGAGTGTTTTTCCGTACTTTTCAAGGTGGCAAAAATCTCATGGGAAAGTGTTTATCTATTGGTTGGGAACGGAGCCATTTCTGTATATTGCAGATCCTGAATTTCTAAAGAAGATGTCATCAGGTGTATTGGGAAAAAGTTGGGGAAAGCCAACAGTGTTTAAGAATGATAGAAAACCAATGTTTGGTAATGGTTTGCTTATGGTGGAAGGTGATGATTGGGTTCGTCACAGGCATCTTATCACTCCTGCTTTCTCTCCCTCCAACTTGAAGGCTATGGCAAGCTTAATGGTAGAGACAACCACGGATATGCTTGACCGATGGACTTCCCAGATCAATTTTGGAAAGTCAGAAATTGATGTGGAAAGAGAAATCACCATTACAGCCGGAGAGATCATTGCTAAGACAAGTTTTGGGATAAGCTATGGAAATGGGAAAAAAGTGTTCGAGAAATTAAGAGCTATGCAGCTAACTTTGTTTAAGTCTAATCGTTTTGTGGGGGTACCTTTTAGCAAGTTTATGTACCCGAAGCAAACCTTAGAAGCAAAACGACTGGGAAACGAGATCGACGCCCTCTTTTTCTCAATTATAACTGCTCAGAAGCAATCAGTTAGTGGAAATTCGCAGCAGAACCTGCTTGGCCTTCTGATGTCTCACAACCATGCCGACGGAACATTATCCACGACAGAGCTCATTGATGAGTGCAAAACTTTCTTTTTTGGAGGGCACGAGACCACAGCCTTGGCACTGACTTGGACAATGTTGCTGTTGGCCATGCATCCGGAGTGGCAAAATCAACTTAGAGAGGAGATCAAAGTAGTCATTGGAGATGGAGAGATAGATGCCACCATGCTTGTTGGACTCAAGAAGATGGGATGGGTGATGAATGAAGTTTTACGATTATACCCCACAGCACCGAACGTACAAAGACAAGCAAGAGAAGATATAAGAGTAAATGACGTCGTAATTCCAAGTGGAACGAATATGTGGATTGATGTTGTAGCAATGCACCATGATCCTGAGTTTTGGGGCGATGACGTTAACGAGTTCAAGCCGGAGAGGTTTCAGAAGGATCCATTGCACGGCGGGTGCAAGCACAAGATGGGTTATTTGCCATTTGGATTTGGAGGGAGAATGTGCGTGGGTAGAAACCTATCCATGATGGAGTATAAGATTGTCCTTACCCTTATCCTTAATAGGTTTTCTTTATCCCTGTCACCAAACTACTGCCATTCTCCTGGAATTTTATTATCTCTTAGGCCTACTCAAGGATTACCTTTAGTGCTTCAACCTCTGTAA

Network for GWHGAAZE026297

Network category	Network	Top300 PCC genelist
Coexpression Positive	Network	Top300 PCC genelist
Coexpression Negative	Network	Top300 PCC genelist

Functional Module

Module ID	Function Annotation
CFinderModule0092	CYTOCHROME_P608_Family CYTOCHROME_P608_Family

Protein Structure

Pfam accession	Pfam name	Alignment start	Alignment end	E-value
PF00067.23	p450	54	458	1.30E-84

Protein Sequence

Gene family

Gene family	subfamily
--	--

KEGG pathway

KO	Enzyme	pathway	mapID
--	--	--	--

Gene Ontology

GO term	Ontology	Name
GO:0055114	biological_process	oxidation-reduction process
GO:0005506	molecular_function	iron ion binding
GO:0016705	molecular_function	oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen
GO:0020037	molecular_function	heme binding

Expression pattern

Expression pattern detail

SRP	Sample	Description	TPM
SRP075780	SRR3591705	youngest leaf	0.000
	SRR3591706	second leaf	0.000
	SRR3591707	mature leaf	0.000
	SRR3591708	Shoot apex	0.000
	SRR3591709	Stem	0.000
	SRR3591710	White floral bud	6.445
	SRR3591711	White flower	0.150
	SRR3591712	Green floral bud	3.164
	SRR3591713	Yellow flower	0.154
SRP173429	SRR8316895	Juvenile bud stage	0.000
	SRR8316896	Juvenile bud stage	0.000
	SRR8316897	Juvenile bud stage	0.000
	SRR8316894	Third green stage	0.016
	SRR8316900	Third green stage	0.629
	SRR8316901	Third green stage	0.872
	SRR8316898	Complete white stage	5.900
	SRR8316899	Complete white stage	42.298
	SRR8316903	Complete white stage	7.582
	SRR8316902	Silver flowering stage	0.227
	SRR8316904	Silver flowering stage	0.535
	SRR8316905	Silver flowering stage	0.132
	SRR8316906	Gold flowering stage	1.075
	SRR8316907	Gold flowering stage	0.231
	SRR8316908	Gold flowering stage	2.936
SRP132670	SRR6706286	Control	2.177
	SRR6706287	Light intensity 50%	2.406
	SRR6706288	Light intensity 20%	2.376
CNP0000432	CNS0095592	Slightly white alabastrum(diploid) 1	0.000
	CNS0095593	Slightly white alabastrum(diploid) 2	0.378
	CNS0095594	Slightly white alabastrum(diploid) 3	0.149
	CNS0095595	Whole white alabastrum(diploid) 2	0.534
	CNS0095596	Whole white alabastrum(diploid) 3	0.000
	CNS0095597	Whole white alabastrum(diploid) 4	0.873
	CNS0095598	Silvery flower (diploied) 1	0.000
	CNS0095599	Silvery flower (diploied) 2	0.046
	CNS0095600	Silvery flower (diploied) 3	0.091
	CNS0095601	Golden flower (diploid) 1	0.057
	CNS0095602	Golden flower (diploid) 2	0.261
	CNS0095603	Golden flower (diploid) 3	0.048
	CNS0095604	Slightly white alabastrum(tetraploid) 1	0.022
	CNS0095605	Slightly white alabastrum(tetraploid) 2	0.000
	CNS0095606	Slightly white alabastrum(tetraploid) 3	0.000
	CNS0095607	Whole white alabastrum(tetraploid) 1	0.430
	CNS0095608	Whole white alabastrum(tetraploid) 2	0.892
	CNS0095609	Whole white alabastrum(tetraploid) 3	0.134
	CNS0095610	Silvery flower (tetraploid) 1	0.065
	CNS0095611	Silvery flower (tetraploid) 2	0.000
	CNS0095612	Silvery flower (tetraploid) 3	0.174
	CNS0095613	Golden flower (tetraploid) 1	0.164
	CNS0095614	Golden flower (tetraploid) 2	0.000
	CNS0095615	Golden flower (tetraploid) 3	0.000
CRA001975	CRR073297	Stem 1	0.000
	CRR073298	Stem 2	0.000
	CRR073299	Stem 3	0.000
	CRR073300	Leaf 1	2.110
	CRR073301	Leaf 2	2.240
	CRR073302	Leaf 3	2.239
	CRR073303	Juvenile bud 1	10.579
	CRR073304	Juvenile bud 2	10.843
	CRR073305	Juvenile bud 3	20.261
	CRR073306	Third green 1	2.457
	CRR073307	Third green 2	3.097
	CRR073308	Third green 3	2.015
	CRR073309	Second white 1	0.038
	CRR073310	Second white 2	0.212
	CRR073311	Second white 3	0.046
	CRR073312	Silver flowering 1	0.000
	CRR073313	Silver flowering 2	0.000
	CRR073314	Silver flowering 3	0.847
	CRR073315	Gold flowering 1	0.000
	CRR073316	Gold flowering 2	0.000
	CRR073317	Gold flowering 3	0.000
	CRR073318	Tawny withering 1	0.394
	CRR073319	Tawny withering 2	0.964
	CRR073320	Tawny withering 3	0.000