Detail information of GWHGAAZE026292


Functional Annotation

DatabaseOrthologsE valueAnnotation
NrXP_010662716.10PREDICTED: kinesin-like protein KIF22 isoform X1 [Vitis vinifera]
Swissprottr|O81635|ATK4_ARATH2E-31Kinesin-4
trEMBLtr|E0CV00|E0CV00_VITVI0Kinesin-like protein {ECO:0000256|RuleBase:RU000394}
TAIR10AT5G23910.15E-122ATP binding microtubule motor family protein

Location And Transcript Sequence (JBrowse)

ScaffoldTypeStartEndStrand
GWHAAZE00000008gene22575832263688-
GWHAAZE00000008mRNA22575832263688-
GWHAAZE00000008exon22575832257626-
GWHAAZE00000008exon22579222257985-
GWHAAZE00000008exon22581142258182-
GWHAAZE00000008exon22583052258326-
GWHAAZE00000008exon22587002258746-
GWHAAZE00000008exon22588322259097-
GWHAAZE00000008exon22592002259287-
GWHAAZE00000008exon22596502259706-
GWHAAZE00000008exon22597902259837-
GWHAAZE00000008exon22599312260011-
GWHAAZE00000008exon22606702260712-
GWHAAZE00000008exon22608012261036-
GWHAAZE00000008exon22611472261352-
GWHAAZE00000008exon22614612261650-
GWHAAZE00000008exon22617622261962-
GWHAAZE00000008exon22623462262511-
GWHAAZE00000008exon22634712263688-
GWHAAZE00000008CDS22634712263688-
GWHAAZE00000008CDS22623462262511-
GWHAAZE00000008CDS22617622261962-
GWHAAZE00000008CDS22614612261650-
GWHAAZE00000008CDS22611472261352-
GWHAAZE00000008CDS22608012261036-
GWHAAZE00000008CDS22606702260712-
GWHAAZE00000008CDS22599312260011-
GWHAAZE00000008CDS22597902259837-
GWHAAZE00000008CDS22596502259706-
GWHAAZE00000008CDS22592002259287-
GWHAAZE00000008CDS22588322259097-
GWHAAZE00000008CDS22587002258746-
GWHAAZE00000008CDS22583052258326-
GWHAAZE00000008CDS22581142258182-
GWHAAZE00000008CDS22579222257985-
GWHAAZE00000008CDS22575832257626-
Transcript Sequence

Network for GWHGAAZE026292

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist


Functional Module

Module IDFunction Annotation


Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF00225.24Kinesin693445.80E-65
Protein Sequence

Gene family

Gene familysubfamily
----

KEGG pathway

KO Enzyme pathway mapID
K10403KIF22 Progesterone-mediated oocyte maturation map04914

Gene Ontology

GO term OntologyName
GO:0007018biological_processmicrotubule-based movement
GO:0003777molecular_functionmicrotubule motor activity
GO:0005524molecular_functionATP binding
GO:0008017molecular_functionmicrotubule binding

Expression pattern


Expression pattern detail

SRPSampleDescriptionTPM
SRP075780SRR3591705youngest leaf21.048
SRR3591706second leaf3.869
SRR3591707mature leaf1.457
SRR3591708Shoot apex25.395
SRR3591709Stem5.801
SRR3591710White floral bud2.568
SRR3591711White flower4.202
SRR3591712Green floral bud3.466
SRR3591713Yellow flower4.161
SRP173429 SRR8316895Juvenile bud stage 8.945
SRR8316896Juvenile bud stage 9.386
SRR8316897Juvenile bud stage 2.060
SRR8316894Third green stage 3.307
SRR8316900Third green stage 5.145
SRR8316901Third green stage 4.708
SRR8316898Complete white stage 0.715
SRR8316899Complete white stage 5.581
SRR8316903Complete white stage 2.386
SRR8316902Silver flowering stage1.610
SRR8316904Silver flowering stage2.026
SRR8316905Silver flowering stage1.066
SRR8316906Gold flowering stage 2.526
SRR8316907Gold flowering stage 2.791
SRR8316908Gold flowering stage 1.730
SRP132670SRR6706286Control2.299
SRR6706287Light intensity 50%2.449
SRR6706288Light intensity 20%2.746
CNP0000432CNS0095592Slightly white alabastrum(diploid) 15.346
CNS0095593Slightly white alabastrum(diploid) 23.927
CNS0095594Slightly white alabastrum(diploid) 34.308
CNS0095595Whole white alabastrum(diploid) 23.730
CNS0095596Whole white alabastrum(diploid) 32.031
CNS0095597Whole white alabastrum(diploid) 42.275
CNS0095598Silvery flower (diploied) 14.154
CNS0095599Silvery flower (diploied) 24.431
CNS0095600Silvery flower (diploied) 33.360
CNS0095601Golden flower (diploid) 11.740
CNS0095602Golden flower (diploid) 22.479
CNS0095603Golden flower (diploid) 32.784
CNS0095604Slightly white alabastrum(tetraploid) 13.375
CNS0095605Slightly white alabastrum(tetraploid) 22.490
CNS0095606Slightly white alabastrum(tetraploid) 36.691
CNS0095607Whole white alabastrum(tetraploid) 12.226
CNS0095608Whole white alabastrum(tetraploid) 20.713
CNS0095609Whole white alabastrum(tetraploid) 31.763
CNS0095610Silvery flower (tetraploid) 11.178
CNS0095611Silvery flower (tetraploid) 21.802
CNS0095612Silvery flower (tetraploid) 31.247
CNS0095613Golden flower (tetraploid) 11.020
CNS0095614Golden flower (tetraploid) 20.717
CNS0095615Golden flower (tetraploid) 30.973
CRA001975CRR073297Stem 15.672
CRR073298Stem 24.663
CRR073299Stem 35.655
CRR073300Leaf 12.666
CRR073301Leaf 22.281
CRR073302Leaf 32.265
CRR073303Juvenile bud 12.365
CRR073304Juvenile bud 21.364
CRR073305Juvenile bud 31.949
CRR073306Third green 10.512
CRR073307Third green 20.594
CRR073308Third green 30.761
CRR073309Second white 10.876
CRR073310Second white 20.462
CRR073311Second white 30.637
CRR073312Silver flowering 10.886
CRR073313Silver flowering 20.382
CRR073314Silver flowering 30.987
CRR073315Gold flowering 10.877
CRR073316Gold flowering 21.006
CRR073317Gold flowering 31.149
CRR073318Tawny withering 14.809
CRR073319Tawny withering 24.752
CRR073320Tawny withering 35.892