Detail information of GWHGAAZE026240


Functional Annotation

DatabaseOrthologsE valueAnnotation
NrKDP31566.10hypothetical protein JCGZ_15383 [Jatropha curcas]
trEMBLtr|A0A067K5R1|A0A067K5R1_JATCU0Uncharacterized protein {ECO:0000313|EMBL:KDP31566.1}
TAIR10AT2G35610.10xyloglucanase 113

Location And Transcript Sequence (JBrowse)

ScaffoldTypeStartEndStrand
GWHAAZE00000008gene859921873239-
GWHAAZE00000008mRNA859921873239-
GWHAAZE00000008exon859921860088-
GWHAAZE00000008exon862582862701-
GWHAAZE00000008exon863033863131-
GWHAAZE00000008exon864439864552-
GWHAAZE00000008exon865865865918-
GWHAAZE00000008exon866055866149-
GWHAAZE00000008exon867323867458-
GWHAAZE00000008exon868503868779-
GWHAAZE00000008exon869948869993-
GWHAAZE00000008exon870081870186-
GWHAAZE00000008exon871966872171-
GWHAAZE00000008exon872625872912-
GWHAAZE00000008exon873095873239-
GWHAAZE00000008CDS873095873239-
GWHAAZE00000008CDS872625872912-
GWHAAZE00000008CDS871966872171-
GWHAAZE00000008CDS870081870186-
GWHAAZE00000008CDS869948869993-
GWHAAZE00000008CDS868503868779-
GWHAAZE00000008CDS867323867458-
GWHAAZE00000008CDS866055866149-
GWHAAZE00000008CDS865865865918-
GWHAAZE00000008CDS864439864552-
GWHAAZE00000008CDS863033863131-
GWHAAZE00000008CDS862582862701-
GWHAAZE00000008CDS859921860088-
Transcript Sequence

Network for GWHGAAZE026240

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist


Functional Module

Module IDFunction Annotation


Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF03407.17Nucleotid_trans1393852.60E-54
Protein Sequence

Gene family

Gene familysubfamily
----

KEGG pathway

KO Enzyme pathway mapID
K20784XEG113 Other types of O-glycan biosynthesis map00514

Gene Ontology

GO term OntologyName

Expression pattern


Expression pattern detail

SRPSampleDescriptionTPM
SRP075780SRR3591705youngest leaf15.936
SRR3591706second leaf7.421
SRR3591707mature leaf11.142
SRR3591708Shoot apex10.585
SRR3591709Stem14.137
SRR3591710White floral bud13.815
SRR3591711White flower18.197
SRR3591712Green floral bud13.786
SRR3591713Yellow flower18.805
SRP173429 SRR8316895Juvenile bud stage 13.053
SRR8316896Juvenile bud stage 14.803
SRR8316897Juvenile bud stage 7.402
SRR8316894Third green stage 7.376
SRR8316900Third green stage 19.519
SRR8316901Third green stage 16.523
SRR8316898Complete white stage 7.391
SRR8316899Complete white stage 24.833
SRR8316903Complete white stage 11.393
SRR8316902Silver flowering stage10.061
SRR8316904Silver flowering stage15.266
SRR8316905Silver flowering stage6.936
SRR8316906Gold flowering stage 27.376
SRR8316907Gold flowering stage 24.638
SRR8316908Gold flowering stage 30.495
SRP132670SRR6706286Control11.789
SRR6706287Light intensity 50%12.073
SRR6706288Light intensity 20%13.324
CNP0000432CNS0095592Slightly white alabastrum(diploid) 114.780
CNS0095593Slightly white alabastrum(diploid) 213.973
CNS0095594Slightly white alabastrum(diploid) 313.129
CNS0095595Whole white alabastrum(diploid) 211.159
CNS0095596Whole white alabastrum(diploid) 310.795
CNS0095597Whole white alabastrum(diploid) 411.347
CNS0095598Silvery flower (diploied) 115.689
CNS0095599Silvery flower (diploied) 214.286
CNS0095600Silvery flower (diploied) 319.243
CNS0095601Golden flower (diploid) 112.462
CNS0095602Golden flower (diploid) 218.791
CNS0095603Golden flower (diploid) 320.665
CNS0095604Slightly white alabastrum(tetraploid) 113.721
CNS0095605Slightly white alabastrum(tetraploid) 212.231
CNS0095606Slightly white alabastrum(tetraploid) 319.243
CNS0095607Whole white alabastrum(tetraploid) 110.749
CNS0095608Whole white alabastrum(tetraploid) 29.335
CNS0095609Whole white alabastrum(tetraploid) 314.141
CNS0095610Silvery flower (tetraploid) 123.371
CNS0095611Silvery flower (tetraploid) 219.223
CNS0095612Silvery flower (tetraploid) 315.550
CNS0095613Golden flower (tetraploid) 111.040
CNS0095614Golden flower (tetraploid) 223.102
CNS0095615Golden flower (tetraploid) 313.946
CRA001975CRR073297Stem 110.838
CRR073298Stem 29.166
CRR073299Stem 38.307
CRR073300Leaf 113.021
CRR073301Leaf 210.244
CRR073302Leaf 39.193
CRR073303Juvenile bud 111.254
CRR073304Juvenile bud 26.577
CRR073305Juvenile bud 39.665
CRR073306Third green 13.792
CRR073307Third green 24.150
CRR073308Third green 34.184
CRR073309Second white 15.146
CRR073310Second white 23.729
CRR073311Second white 34.286
CRR073312Silver flowering 14.517
CRR073313Silver flowering 22.766
CRR073314Silver flowering 33.920
CRR073315Gold flowering 12.873
CRR073316Gold flowering 25.211
CRR073317Gold flowering 32.938
CRR073318Tawny withering 110.904
CRR073319Tawny withering 210.548
CRR073320Tawny withering 310.111