Detail information of GWHGAAZE026203


Functional Annotation

DatabaseOrthologsE valueAnnotation
NrXP_010259870.11.02183E-69PREDICTED: uncharacterized protein LOC104599158 [Nelumbo nucifera]
Swissprottr|P33083|AX6B_SOYBN2E-15Auxin-induced protein 6B
trEMBLtr|A0A067FUW0|A0A067FUW0_CITSI6E-63Uncharacterized protein {ECO:0000313|EMBL:KDO67187.1}
TAIR10AT2G24400.13E-30SAUR-like auxin-responsive protein family

Location And Transcript Sequence (JBrowse)

ScaffoldTypeStartEndStrand
GWHAAZE00000007gene7536234975362852+
GWHAAZE00000007mRNA7536234975362852+
GWHAAZE00000007exon7536234975362852+
GWHAAZE00000007CDS7536234975362852+
Transcript Sequence

Network for GWHGAAZE026203

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist


Functional Module

Module IDFunction Annotation


Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF02519.15Auxin_inducible211252.30E-25
Protein Sequence

Gene family

Gene familysubfamily
----

KEGG pathway

KO Enzyme pathway mapID
K14488SAUR Plant hormone signal transduction map04075

Gene Ontology

GO term OntologyName
GO:0009733biological_processresponse to auxin

Expression pattern


Expression pattern detail

SRPSampleDescriptionTPM
SRP075780SRR3591705youngest leaf1.832
SRR3591706second leaf0.639
SRR3591707mature leaf0.000
SRR3591708Shoot apex5.417
SRR3591709Stem0.409
SRR3591710White floral bud0.014
SRR3591711White flower0.000
SRR3591712Green floral bud0.000
SRR3591713Yellow flower0.000
SRP173429 SRR8316895Juvenile bud stage 0.487
SRR8316896Juvenile bud stage 0.244
SRR8316897Juvenile bud stage 0.501
SRR8316894Third green stage 0.430
SRR8316900Third green stage 0.160
SRR8316901Third green stage 0.493
SRR8316898Complete white stage 0.152
SRR8316899Complete white stage 0.000
SRR8316903Complete white stage 0.176
SRR8316902Silver flowering stage0.000
SRR8316904Silver flowering stage0.000
SRR8316905Silver flowering stage0.000
SRR8316906Gold flowering stage 0.004
SRR8316907Gold flowering stage 0.299
SRR8316908Gold flowering stage 0.000
SRP132670SRR6706286Control0.000
SRR6706287Light intensity 50%0.000
SRR6706288Light intensity 20%0.001
CNP0000432CNS0095592Slightly white alabastrum(diploid) 10.576
CNS0095593Slightly white alabastrum(diploid) 20.448
CNS0095594Slightly white alabastrum(diploid) 30.884
CNS0095595Whole white alabastrum(diploid) 20.078
CNS0095596Whole white alabastrum(diploid) 30.074
CNS0095597Whole white alabastrum(diploid) 40.000
CNS0095598Silvery flower (diploied) 10.000
CNS0095599Silvery flower (diploied) 20.755
CNS0095600Silvery flower (diploied) 30.119
CNS0095601Golden flower (diploid) 10.184
CNS0095602Golden flower (diploid) 20.252
CNS0095603Golden flower (diploid) 30.086
CNS0095604Slightly white alabastrum(tetraploid) 10.437
CNS0095605Slightly white alabastrum(tetraploid) 20.168
CNS0095606Slightly white alabastrum(tetraploid) 30.456
CNS0095607Whole white alabastrum(tetraploid) 10.152
CNS0095608Whole white alabastrum(tetraploid) 20.085
CNS0095609Whole white alabastrum(tetraploid) 30.050
CNS0095610Silvery flower (tetraploid) 10.000
CNS0095611Silvery flower (tetraploid) 20.000
CNS0095612Silvery flower (tetraploid) 30.000
CNS0095613Golden flower (tetraploid) 10.000
CNS0095614Golden flower (tetraploid) 20.143
CNS0095615Golden flower (tetraploid) 30.000
CRA001975CRR073297Stem 10.435
CRR073298Stem 20.864
CRR073299Stem 30.744
CRR073300Leaf 10.298
CRR073301Leaf 20.169
CRR073302Leaf 30.082
CRR073303Juvenile bud 10.000
CRR073304Juvenile bud 20.000
CRR073305Juvenile bud 30.146
CRR073306Third green 10.612
CRR073307Third green 20.118
CRR073308Third green 30.000
CRR073309Second white 10.000
CRR073310Second white 20.000
CRR073311Second white 30.000
CRR073312Silver flowering 10.000
CRR073313Silver flowering 20.000
CRR073314Silver flowering 30.000
CRR073315Gold flowering 10.000
CRR073316Gold flowering 20.169
CRR073317Gold flowering 30.000
CRR073318Tawny withering 10.636
CRR073319Tawny withering 21.188
CRR073320Tawny withering 33.870