Gene detail

Detail information of GWHGAAZE026200

Functional Annotation

Database	Orthologs	E value	Annotation
Nr	AGO05996.1	8.71861E-95	bZIP transcription factor family protein 12 [Camellia sinensis]
Swissprot	tr\|Q9FUD3\|BZIP9_ARATH	1E-69	Basic leucine zipper 9
trEMBL	tr\|R9WYP9\|R9WYP9_CAMSI	3E-95	BZIP transcription factor family protein 12 {ECO:0000313\|EMBL:AGO05996.1}
TAIR10	AT5G24800.1	8E-43	basic leucine zipper 9

Location And Transcript Sequence (JBrowse)

Scaffold	Type	Start	End	Strand
GWHAAZE00000007	gene	75327157	75328774	+
GWHAAZE00000007	mRNA	75327157	75328774	+
GWHAAZE00000007	exon	75327157	75327404	+
GWHAAZE00000007	exon	75327691	75327766	+
GWHAAZE00000007	exon	75328126	75328251	+
GWHAAZE00000007	exon	75328427	75328774	+
GWHAAZE00000007	CDS	75327157	75327404	+
GWHAAZE00000007	CDS	75327691	75327766	+
GWHAAZE00000007	CDS	75328126	75328251	+
GWHAAZE00000007	CDS	75328427	75328774	+

Transcript Sequence
>GWHTAAZE026234 ATGACTGTTCATAAAAAAACATCATTAGGAATCTGTAGTTTTCATGTTGATGATGTATATGTGAAATGGATCTGTAATTTTTCAGTCGGGAGTCCAACTTCAGCTACTAAACCAATAGGCAGAGATAGTCAGGCAATGGGAGCTACTAGCGGTTCATCACGTGATCAGTCAGATGATGATGACTTGGACACAGAAACCGGCCCATGCGAACAGAGCACTGACAATATCGATGTTAAACGCATTAAAAGAATGGTCTCAAACAGGGAGTCTGCGAGACGCTCAAGAAAAAGAAAACAAGAGCATTTGGCAGAGCTCGAACAGCAGGTTGAACAACTTCGAGGAGAAAATTCATCTCTGTTCAAGAACTTAACGGATGCTACTCAACAATTTAAAGACGCTAGCACTAACAATCGTGTGCTTAAGTCAGATGTGGAAGCATTGAGGGCCAAGGTGAAGCTGGCCGAAGATATGGTTGCGCGTGGATCGTTGACCTCGAGTTTGAGTCAACTTCTTCAGAATCATTTGAACAATCCCCACCAATCATTCAGCACGGGTCAAAATAATAATATGTCGCGTGTGGCTAACGTCTCTCCCACCATCACAGTACGAGGAGATGACGGCTTGTCTTATCCACCCGGATTGACAGTTTCGGGGCAAAACTCAACCATCGTACTTGAAAATGTGGACGCCACCACTAACTTCAGTGGAAATGTGAAGAATGGTATTATGAGCGATCCTGTGAGCTGCGCGTCGGAGATGTGGCCTTGGGAATCTCATGTTCCTACAATCTCTAAATAG

Network for GWHGAAZE026200

Network category	Network	Top300 PCC genelist
Coexpression Positive	Network	Top300 PCC genelist
Coexpression Negative	Network	Top300 PCC genelist

Functional Module

Module ID	Function Annotation

Protein Structure

Pfam accession	Pfam name	Alignment start	Alignment end	E-value
PF00170.22	bZIP_1	78	129	1.60E-14

Protein Sequence

Gene family

Gene family	subfamily
Transcription Factors Family	bZIP

KEGG pathway

KO	Enzyme	pathway	mapID
--	--	--	--

Gene Ontology

GO term	Ontology	Name
GO:0006355	biological_process	regulation of transcription, DNA-templated
GO:0003700	molecular_function	DNA-binding transcription factor activity

Expression pattern

Expression pattern detail

SRP	Sample	Description	TPM
SRP075780	SRR3591705	youngest leaf	35.440
	SRR3591706	second leaf	16.889
	SRR3591707	mature leaf	16.864
	SRR3591708	Shoot apex	21.871
	SRR3591709	Stem	48.948
	SRR3591710	White floral bud	237.137
	SRR3591711	White flower	177.381
	SRR3591712	Green floral bud	90.351
	SRR3591713	Yellow flower	133.231
SRP173429	SRR8316895	Juvenile bud stage	42.370
	SRR8316896	Juvenile bud stage	56.114
	SRR8316897	Juvenile bud stage	26.415
	SRR8316894	Third green stage	20.391
	SRR8316900	Third green stage	58.264
	SRR8316901	Third green stage	58.627
	SRR8316898	Complete white stage	151.872
	SRR8316899	Complete white stage	111.084
	SRR8316903	Complete white stage	273.058
	SRR8316902	Silver flowering stage	110.280
	SRR8316904	Silver flowering stage	131.075
	SRR8316905	Silver flowering stage	46.051
	SRR8316906	Gold flowering stage	153.702
	SRR8316907	Gold flowering stage	154.102
	SRR8316908	Gold flowering stage	113.574
SRP132670	SRR6706286	Control	103.630
	SRR6706287	Light intensity 50%	110.582
	SRR6706288	Light intensity 20%	97.475
CNP0000432	CNS0095592	Slightly white alabastrum(diploid) 1	48.407
	CNS0095593	Slightly white alabastrum(diploid) 2	46.743
	CNS0095594	Slightly white alabastrum(diploid) 3	52.812
	CNS0095595	Whole white alabastrum(diploid) 2	36.675
	CNS0095596	Whole white alabastrum(diploid) 3	34.492
	CNS0095597	Whole white alabastrum(diploid) 4	43.898
	CNS0095598	Silvery flower (diploied) 1	66.646
	CNS0095599	Silvery flower (diploied) 2	63.263
	CNS0095600	Silvery flower (diploied) 3	174.996
	CNS0095601	Golden flower (diploid) 1	50.175
	CNS0095602	Golden flower (diploid) 2	123.073
	CNS0095603	Golden flower (diploid) 3	110.284
	CNS0095604	Slightly white alabastrum(tetraploid) 1	22.817
	CNS0095605	Slightly white alabastrum(tetraploid) 2	27.389
	CNS0095606	Slightly white alabastrum(tetraploid) 3	34.926
	CNS0095607	Whole white alabastrum(tetraploid) 1	28.187
	CNS0095608	Whole white alabastrum(tetraploid) 2	27.640
	CNS0095609	Whole white alabastrum(tetraploid) 3	65.633
	CNS0095610	Silvery flower (tetraploid) 1	130.754
	CNS0095611	Silvery flower (tetraploid) 2	110.691
	CNS0095612	Silvery flower (tetraploid) 3	119.178
	CNS0095613	Golden flower (tetraploid) 1	83.594
	CNS0095614	Golden flower (tetraploid) 2	92.039
	CNS0095615	Golden flower (tetraploid) 3	80.924
CRA001975	CRR073297	Stem 1	109.356
	CRR073298	Stem 2	109.125
	CRR073299	Stem 3	151.587
	CRR073300	Leaf 1	121.016
	CRR073301	Leaf 2	117.576
	CRR073302	Leaf 3	134.681
	CRR073303	Juvenile bud 1	125.382
	CRR073304	Juvenile bud 2	184.834
	CRR073305	Juvenile bud 3	151.679
	CRR073306	Third green 1	375.081
	CRR073307	Third green 2	398.950
	CRR073308	Third green 3	358.111
	CRR073309	Second white 1	410.324
	CRR073310	Second white 2	299.682
	CRR073311	Second white 3	295.578
	CRR073312	Silver flowering 1	251.896
	CRR073313	Silver flowering 2	267.875
	CRR073314	Silver flowering 3	251.120
	CRR073315	Gold flowering 1	67.458
	CRR073316	Gold flowering 2	63.968
	CRR073317	Gold flowering 3	71.681
	CRR073318	Tawny withering 1	105.567
	CRR073319	Tawny withering 2	111.504
	CRR073320	Tawny withering 3	102.660