Gene detail

Detail information of GWHGAAZE026088

Functional Annotation

Database	Orthologs	E value	Annotation
Nr	XP_007223290.1	2.9973E-164	hypothetical protein PRUPE_ppa005575mg [Prunus persica]
COG	YP_823396.1	7E-36	serine/threonine protein kinase
Swissprot	tr\|Q8W1D5\|CIPKP_ARATH	1E-157	CBL-interacting serine/threonine-protein kinase 25
trEMBL	tr\|M5XF03\|M5XF03_PRUPE	1E-164	Uncharacterized protein {ECO:0000313\|EMBL:EMJ24489.1}
TAIR10	AT5G25110.1	1E-127	CBL-interacting protein kinase 25

Location And Transcript Sequence (JBrowse)

Scaffold	Type	Start	End	Strand
GWHAAZE00000007	gene	73142362	73143183	-
GWHAAZE00000007	mRNA	73142362	73143183	-
GWHAAZE00000007	exon	73142362	73143183	-
GWHAAZE00000007	CDS	73142362	73143183	-

Transcript Sequence
>GWHTAAZE026122 ATGGGGAGATTATTAGGCAAAGGCACTTTTGCCAAAGTTTATTATGGAAAAGAAATTGCCACGAATGAAAGCGTCGCAATTAAAGTGTTGGACAAAGACAAGGTGCAAAGAGAAGGCCTAATGGAGCAAATTAAGAGAGAGATTTCTGTTATGGGGCTCGTAAAACACCCGAATATTGTCGAGCTAAAGGAAGTAATGGCCACAAAATCAAAAATTTTCTTCATTATGGAGTACGTTAAAGGTGGCGAGCTCTTTTCTAAGCTGACCAAATCAGGCAAGCTCAGAGAAGACCTCGCACGCAAATACTTTCAACAGTTGATATCAGCTATTGACTTTTGTCACAGCCGCGGTGTATCACACCGCGACTTGAAGCCAGAGAATCTGCTCATTGACGATAATGAGGATTTAAAGATATCTGACTTCGGTTTGTCTGCCTTACCGGAACAACTCAGGTACGACGGACTTCTCCACACACAGTGCGGAACTCCAGCATACGTAGCCCCGGAGGTTCTAAGAAAAAAGGGCTATAACGGCGAAAAAGCCGATATCTGGTCATGTGGAGTCATACTTTACGTACTTTTAGCCGGATTTCTTCCTTTCCAGGACGAGAATTTAATGAACATGTATCGGAAAGTTTTGAAAGCGAAGTATGACTTTCCATCCTGGTTTTCACCAGAATCGAGAAGATTGATCTCAAAGTTACTTGTGGCAGATCCGGATCGGAGAATCACAATTCCTGCGATCACCCGAGTTCCTTGGTTTCACAAAGGATTCTCGAGGCATAATTCCTTCGCAAACCACGAGGAAAATACTGAACTAGAC

Network for GWHGAAZE026088

Network category	Network	Top300 PCC genelist
Coexpression Positive	Network	Top300 PCC genelist
Coexpression Negative	Network	Top300 PCC genelist

Functional Module

Module ID	Function Annotation

Protein Structure

Pfam accession	Pfam name	Alignment start	Alignment end	E-value
PF00069.26	Pkinase	3	254	1.20E-74

Protein Sequence

Gene family

Gene family	subfamily
Protein Kinases Family	CAMK_CAMKL-CHK1

KEGG pathway

KO	Enzyme	pathway	mapID
--	--	--	--

Gene Ontology

GO term	Ontology	Name
GO:0006468	biological_process	protein phosphorylation
GO:0005524	molecular_function	ATP binding
GO:0004672	molecular_function	protein kinase activity

Expression pattern

Expression pattern detail

SRP	Sample	Description	TPM
SRP075780	SRR3591705	youngest leaf	0.709
	SRR3591706	second leaf	0.050
	SRR3591707	mature leaf	4.327
	SRR3591708	Shoot apex	0.000
	SRR3591709	Stem	0.882
	SRR3591710	White floral bud	8.141
	SRR3591711	White flower	15.425
	SRR3591712	Green floral bud	1.118
	SRR3591713	Yellow flower	28.019
SRP173429	SRR8316895	Juvenile bud stage	0.500
	SRR8316896	Juvenile bud stage	1.118
	SRR8316897	Juvenile bud stage	0.195
	SRR8316894	Third green stage	0.110
	SRR8316900	Third green stage	0.157
	SRR8316901	Third green stage	0.192
	SRR8316898	Complete white stage	5.896
	SRR8316899	Complete white stage	0.633
	SRR8316903	Complete white stage	10.712
	SRR8316902	Silver flowering stage	24.988
	SRR8316904	Silver flowering stage	34.973
	SRR8316905	Silver flowering stage	19.180
	SRR8316906	Gold flowering stage	84.064
	SRR8316907	Gold flowering stage	72.130
	SRR8316908	Gold flowering stage	69.314
SRP132670	SRR6706286	Control	0.455
	SRR6706287	Light intensity 50%	0.544
	SRR6706288	Light intensity 20%	0.404
CNP0000432	CNS0095592	Slightly white alabastrum(diploid) 1	1.949
	CNS0095593	Slightly white alabastrum(diploid) 2	0.199
	CNS0095594	Slightly white alabastrum(diploid) 3	0.787
	CNS0095595	Whole white alabastrum(diploid) 2	0.679
	CNS0095596	Whole white alabastrum(diploid) 3	1.229
	CNS0095597	Whole white alabastrum(diploid) 4	1.321
	CNS0095598	Silvery flower (diploied) 1	6.768
	CNS0095599	Silvery flower (diploied) 2	9.774
	CNS0095600	Silvery flower (diploied) 3	56.543
	CNS0095601	Golden flower (diploid) 1	7.812
	CNS0095602	Golden flower (diploid) 2	40.747
	CNS0095603	Golden flower (diploid) 3	41.554
	CNS0095604	Slightly white alabastrum(tetraploid) 1	0.587
	CNS0095605	Slightly white alabastrum(tetraploid) 2	0.347
	CNS0095606	Slightly white alabastrum(tetraploid) 3	0.077
	CNS0095607	Whole white alabastrum(tetraploid) 1	0.760
	CNS0095608	Whole white alabastrum(tetraploid) 2	1.579
	CNS0095609	Whole white alabastrum(tetraploid) 3	0.673
	CNS0095610	Silvery flower (tetraploid) 1	41.331
	CNS0095611	Silvery flower (tetraploid) 2	49.297
	CNS0095612	Silvery flower (tetraploid) 3	42.854
	CNS0095613	Golden flower (tetraploid) 1	29.749
	CNS0095614	Golden flower (tetraploid) 2	45.675
	CNS0095615	Golden flower (tetraploid) 3	20.499
CRA001975	CRR073297	Stem 1	5.304
	CRR073298	Stem 2	1.811
	CRR073299	Stem 3	2.453
	CRR073300	Leaf 1	0.619
	CRR073301	Leaf 2	0.618
	CRR073302	Leaf 3	0.324
	CRR073303	Juvenile bud 1	0.616
	CRR073304	Juvenile bud 2	0.691
	CRR073305	Juvenile bud 3	0.843
	CRR073306	Third green 1	62.489
	CRR073307	Third green 2	50.977
	CRR073308	Third green 3	50.252
	CRR073309	Second white 1	156.652
	CRR073310	Second white 2	205.263
	CRR073311	Second white 3	167.020
	CRR073312	Silver flowering 1	199.372
	CRR073313	Silver flowering 2	189.893
	CRR073314	Silver flowering 3	189.365
	CRR073315	Gold flowering 1	2.174
	CRR073316	Gold flowering 2	1.205
	CRR073317	Gold flowering 3	0.416
	CRR073318	Tawny withering 1	12.089
	CRR073319	Tawny withering 2	3.327
	CRR073320	Tawny withering 3	16.023