Detail information of GWHGAAZE026018


Functional Annotation

DatabaseOrthologsE valueAnnotation
NrXP_002282493.21.6533E-123PREDICTED: CRC domain-containing protein TSO1-like [Vitis vinifera]
Swissprottr|Q9LUI3|TSO1_ARATH2E-56CRC domain-containing protein TSO1
trEMBLtr|A0A068U8C0|A0A068U8C0_COFCA2E-113Coffea canephora DH200=94 genomic scaffold, scaffold_14 {ECO:0000313|EMBL:CDP04785.1}
TAIR10AT3G22780.17E-39Tesmin/TSO1-like CXC domain-containing protein

Location And Transcript Sequence (JBrowse)

ScaffoldTypeStartEndStrand
GWHAAZE00000007gene7190339471908806-
GWHAAZE00000007mRNA7190339471908806-
GWHAAZE00000007exon7190339471903563-
GWHAAZE00000007exon7190462571904691-
GWHAAZE00000007exon7190508171905179-
GWHAAZE00000007exon7190525871905444-
GWHAAZE00000007exon7190554471905618-
GWHAAZE00000007exon7190612571906708-
GWHAAZE00000007exon7190771171907845-
GWHAAZE00000007exon7190794771908137-
GWHAAZE00000007exon7190823071908285-
GWHAAZE00000007exon7190840471908558-
GWHAAZE00000007exon7190880471908806-
GWHAAZE00000007CDS7190880471908806-
GWHAAZE00000007CDS7190840471908558-
GWHAAZE00000007CDS7190823071908285-
GWHAAZE00000007CDS7190794771908137-
GWHAAZE00000007CDS7190771171907845-
GWHAAZE00000007CDS7190612571906708-
GWHAAZE00000007CDS7190554471905618-
GWHAAZE00000007CDS7190525871905444-
GWHAAZE00000007CDS7190508171905179-
GWHAAZE00000007CDS7190462571904691-
GWHAAZE00000007CDS7190339471903563-
Transcript Sequence

Network for GWHGAAZE026018

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist


Functional Module

Module IDFunction Annotation


Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF03638.16TCR3884232.20E-11
PF03638.16TCR4765111.40E-10
Protein Sequence

Gene family

Gene familysubfamily
Transcription Factors FamilyCPP

KEGG pathway

KO Enzyme pathway mapID
K21776LIN54 Cellular senescence map04218

Gene Ontology

GO term OntologyName

Expression pattern


Expression pattern detail

SRPSampleDescriptionTPM
SRP075780SRR3591705youngest leaf15.384
SRR3591706second leaf3.827
SRR3591707mature leaf0.800
SRR3591708Shoot apex18.187
SRR3591709Stem9.109
SRR3591710White floral bud5.609
SRR3591711White flower6.286
SRR3591712Green floral bud5.534
SRR3591713Yellow flower2.489
SRP173429 SRR8316895Juvenile bud stage 8.066
SRR8316896Juvenile bud stage 8.594
SRR8316897Juvenile bud stage 3.550
SRR8316894Third green stage 3.907
SRR8316900Third green stage 8.914
SRR8316901Third green stage 7.980
SRR8316898Complete white stage 1.747
SRR8316899Complete white stage 7.712
SRR8316903Complete white stage 3.643
SRR8316902Silver flowering stage1.714
SRR8316904Silver flowering stage2.493
SRR8316905Silver flowering stage1.216
SRR8316906Gold flowering stage 1.790
SRR8316907Gold flowering stage 1.876
SRR8316908Gold flowering stage 2.459
SRP132670SRR6706286Control6.994
SRR6706287Light intensity 50%7.871
SRR6706288Light intensity 20%7.731
CNP0000432CNS0095592Slightly white alabastrum(diploid) 14.015
CNS0095593Slightly white alabastrum(diploid) 22.022
CNS0095594Slightly white alabastrum(diploid) 32.488
CNS0095595Whole white alabastrum(diploid) 23.377
CNS0095596Whole white alabastrum(diploid) 32.840
CNS0095597Whole white alabastrum(diploid) 42.913
CNS0095598Silvery flower (diploied) 13.625
CNS0095599Silvery flower (diploied) 22.892
CNS0095600Silvery flower (diploied) 34.010
CNS0095601Golden flower (diploid) 12.338
CNS0095602Golden flower (diploid) 23.555
CNS0095603Golden flower (diploid) 33.062
CNS0095604Slightly white alabastrum(tetraploid) 15.265
CNS0095605Slightly white alabastrum(tetraploid) 23.148
CNS0095606Slightly white alabastrum(tetraploid) 38.196
CNS0095607Whole white alabastrum(tetraploid) 13.144
CNS0095608Whole white alabastrum(tetraploid) 22.357
CNS0095609Whole white alabastrum(tetraploid) 34.227
CNS0095610Silvery flower (tetraploid) 13.800
CNS0095611Silvery flower (tetraploid) 24.876
CNS0095612Silvery flower (tetraploid) 35.694
CNS0095613Golden flower (tetraploid) 11.064
CNS0095614Golden flower (tetraploid) 21.677
CNS0095615Golden flower (tetraploid) 30.953
CRA001975CRR073297Stem 115.896
CRR073298Stem 213.038
CRR073299Stem 39.913
CRR073300Leaf 19.354
CRR073301Leaf 29.269
CRR073302Leaf 36.339
CRR073303Juvenile bud 15.010
CRR073304Juvenile bud 23.059
CRR073305Juvenile bud 36.643
CRR073306Third green 11.939
CRR073307Third green 20.620
CRR073308Third green 31.054
CRR073309Second white 10.996
CRR073310Second white 20.754
CRR073311Second white 30.912
CRR073312Silver flowering 10.450
CRR073313Silver flowering 20.729
CRR073314Silver flowering 31.515
CRR073315Gold flowering 10.964
CRR073316Gold flowering 21.829
CRR073317Gold flowering 30.418
CRR073318Tawny withering 17.053
CRR073319Tawny withering 24.467
CRR073320Tawny withering 36.136