Detail information of GWHGAAZE025883


Functional Annotation

DatabaseOrthologsE valueAnnotation
NrXP_009361514.10PREDICTED: clathrin interactor EPSIN 1-like isoform X4 [Pyrus x bretschneideri]
Swissprottr|Q8VY07|EPN1_ARATH0Clathrin interactor EPSIN 1
trEMBLtr|D7STK8|D7STK8_VITVI0Putative uncharacterized protein {ECO:0000313|EMBL:CBI20607.3}
TAIR10AT5G11710.13E-155ENTH/VHS family protein

Location And Transcript Sequence (JBrowse)

ScaffoldTypeStartEndStrand
GWHAAZE00000007gene6952692569536857-
GWHAAZE00000007mRNA6952692569536857-
GWHAAZE00000007exon6952692569527142-
GWHAAZE00000007exon6952780869528198-
GWHAAZE00000007exon6953044469530655-
GWHAAZE00000007exon6953221969532379-
GWHAAZE00000007exon6953297569533229-
GWHAAZE00000007exon6953333169533476-
GWHAAZE00000007exon6953356169533644-
GWHAAZE00000007exon6953394869534026-
GWHAAZE00000007exon6953414469534223-
GWHAAZE00000007exon6953646769536518-
GWHAAZE00000007exon6953663069536677-
GWHAAZE00000007exon6953682169536857-
GWHAAZE00000007five_prime_UTR6953682169536857-
GWHAAZE00000007five_prime_UTR6953667169536677-
GWHAAZE00000007CDS6953663069536670-
GWHAAZE00000007CDS6953646769536518-
GWHAAZE00000007CDS6953414469534223-
GWHAAZE00000007CDS6953394869534026-
GWHAAZE00000007CDS6953356169533644-
GWHAAZE00000007CDS6953333169533476-
GWHAAZE00000007CDS6953297569533229-
GWHAAZE00000007CDS6953221969532379-
GWHAAZE00000007CDS6953044469530655-
GWHAAZE00000007CDS6952780869528198-
GWHAAZE00000007CDS6952692569527142-
Transcript Sequence

Network for GWHGAAZE025883

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist


Functional Module

Module IDFunction Annotation


Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF01417.21ENTH271476.20E-43
Protein Sequence

Gene family

Gene familysubfamily
----

KEGG pathway

KO Enzyme pathway mapID
K12471EPN Endocytosis map04144

Gene Ontology

GO term OntologyName

Expression pattern


Expression pattern detail

SRPSampleDescriptionTPM
SRP075780SRR3591705youngest leaf92.425
SRR3591706second leaf45.030
SRR3591707mature leaf30.793
SRR3591708Shoot apex46.761
SRR3591709Stem70.044
SRR3591710White floral bud82.285
SRR3591711White flower78.070
SRR3591712Green floral bud82.809
SRR3591713Yellow flower63.071
SRP173429 SRR8316895Juvenile bud stage 37.408
SRR8316896Juvenile bud stage 47.531
SRR8316897Juvenile bud stage 22.843
SRR8316894Third green stage 22.339
SRR8316900Third green stage 74.400
SRR8316901Third green stage 64.594
SRR8316898Complete white stage 58.295
SRR8316899Complete white stage 91.791
SRR8316903Complete white stage 89.956
SRR8316902Silver flowering stage43.512
SRR8316904Silver flowering stage67.863
SRR8316905Silver flowering stage27.139
SRR8316906Gold flowering stage 81.554
SRR8316907Gold flowering stage 82.581
SRR8316908Gold flowering stage 90.295
SRP132670SRR6706286Control58.532
SRR6706287Light intensity 50%65.135
SRR6706288Light intensity 20%64.550
CNP0000432CNS0095592Slightly white alabastrum(diploid) 142.988
CNS0095593Slightly white alabastrum(diploid) 244.666
CNS0095594Slightly white alabastrum(diploid) 339.450
CNS0095595Whole white alabastrum(diploid) 247.507
CNS0095596Whole white alabastrum(diploid) 346.487
CNS0095597Whole white alabastrum(diploid) 440.420
CNS0095598Silvery flower (diploied) 136.163
CNS0095599Silvery flower (diploied) 239.842
CNS0095600Silvery flower (diploied) 378.159
CNS0095601Golden flower (diploid) 131.168
CNS0095602Golden flower (diploid) 260.042
CNS0095603Golden flower (diploid) 363.536
CNS0095604Slightly white alabastrum(tetraploid) 152.506
CNS0095605Slightly white alabastrum(tetraploid) 247.426
CNS0095606Slightly white alabastrum(tetraploid) 387.298
CNS0095607Whole white alabastrum(tetraploid) 144.167
CNS0095608Whole white alabastrum(tetraploid) 248.893
CNS0095609Whole white alabastrum(tetraploid) 377.845
CNS0095610Silvery flower (tetraploid) 175.846
CNS0095611Silvery flower (tetraploid) 273.072
CNS0095612Silvery flower (tetraploid) 391.775
CNS0095613Golden flower (tetraploid) 152.962
CNS0095614Golden flower (tetraploid) 261.310
CNS0095615Golden flower (tetraploid) 386.121
CRA001975CRR073297Stem 161.829
CRR073298Stem 253.726
CRR073299Stem 361.377
CRR073300Leaf 180.114
CRR073301Leaf 273.123
CRR073302Leaf 361.781
CRR073303Juvenile bud 188.483
CRR073304Juvenile bud 284.477
CRR073305Juvenile bud 388.938
CRR073306Third green 195.169
CRR073307Third green 293.308
CRR073308Third green 395.799
CRR073309Second white 177.096
CRR073310Second white 285.504
CRR073311Second white 367.644
CRR073312Silver flowering 162.792
CRR073313Silver flowering 263.360
CRR073314Silver flowering 355.762
CRR073315Gold flowering 124.278
CRR073316Gold flowering 242.209
CRR073317Gold flowering 329.319
CRR073318Tawny withering 167.687
CRR073319Tawny withering 255.609
CRR073320Tawny withering 376.155