Detail information of GWHGAAZE025870


Functional Annotation

DatabaseOrthologsE valueAnnotation
NrCDP03032.10unnamed protein product [Coffea canephora]
Swissprottr|Q7XZU1|SAC4_ARATH0Phosphoinositide phosphatase SAC4
trEMBLtr|A0A068U3X2|A0A068U3X2_COFCA0Coffea canephora DH200=94 genomic scaffold, scaffold_9 {ECO:0000313|EMBL:CDP03032.1}
TAIR10AT5G20840.10Phosphoinositide phosphatase family protein

Location And Transcript Sequence (JBrowse)

ScaffoldTypeStartEndStrand
GWHAAZE00000007gene6927691869295835-
GWHAAZE00000007mRNA6927691869295835-
GWHAAZE00000007exon6929564069295835-
GWHAAZE00000007exon6929539469295559-
GWHAAZE00000007exon6929418369294330-
GWHAAZE00000007exon6929376069293836-
GWHAAZE00000007exon6929059569290782-
GWHAAZE00000007exon6929042269290519-
GWHAAZE00000007exon6928999369290126-
GWHAAZE00000007exon6928973069289858-
GWHAAZE00000007exon6928873569289122-
GWHAAZE00000007exon6928200269282123-
GWHAAZE00000007exon6927998469280100-
GWHAAZE00000007exon6927946669279633-
GWHAAZE00000007exon6927829569278441-
GWHAAZE00000007exon6927759469277702-
GWHAAZE00000007exon6927691869277040-
GWHAAZE00000007CDS6929564069295835-
GWHAAZE00000007CDS6929539469295559-
GWHAAZE00000007CDS6929418369294330-
GWHAAZE00000007CDS6929376069293836-
GWHAAZE00000007CDS6929059569290782-
GWHAAZE00000007CDS6929042269290519-
GWHAAZE00000007CDS6928999369290126-
GWHAAZE00000007CDS6928973069289858-
GWHAAZE00000007CDS6928873569289122-
GWHAAZE00000007CDS6928200269282123-
GWHAAZE00000007CDS6927998469280100-
GWHAAZE00000007CDS6927946669279633-
GWHAAZE00000007CDS6927829569278441-
GWHAAZE00000007CDS6927759469277702-
GWHAAZE00000007CDS6927691869277040-
Transcript Sequence

Network for GWHGAAZE025870

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist


Functional Module

Module IDFunction Annotation


Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF02383.19Syja_N621102.60E-07
PF02383.19Syja_N1203353.30E-59
Protein Sequence

Gene family

Gene familysubfamily
----

KEGG pathway

KO Enzyme pathway mapID
K22913FIG4 Metabolic pathways map01100
Inositol phosphate metabolismmap00562

Gene Ontology

GO term OntologyName
GO:0042578molecular_functionphosphoric ester hydrolase activity

Expression pattern


Expression pattern detail

SRPSampleDescriptionTPM
SRP075780SRR3591705youngest leaf45.637
SRR3591706second leaf20.362
SRR3591707mature leaf25.506
SRR3591708Shoot apex31.481
SRR3591709Stem42.735
SRR3591710White floral bud42.498
SRR3591711White flower39.095
SRR3591712Green floral bud44.926
SRR3591713Yellow flower31.169
SRP173429 SRR8316895Juvenile bud stage 22.648
SRR8316896Juvenile bud stage 29.346
SRR8316897Juvenile bud stage 15.716
SRR8316894Third green stage 14.780
SRR8316900Third green stage 39.543
SRR8316901Third green stage 36.975
SRR8316898Complete white stage 13.519
SRR8316899Complete white stage 38.451
SRR8316903Complete white stage 26.686
SRR8316902Silver flowering stage12.896
SRR8316904Silver flowering stage22.770
SRR8316905Silver flowering stage10.134
SRR8316906Gold flowering stage 32.094
SRR8316907Gold flowering stage 30.162
SRR8316908Gold flowering stage 28.988
SRP132670SRR6706286Control25.493
SRR6706287Light intensity 50%28.673
SRR6706288Light intensity 20%30.820
CNP0000432CNS0095592Slightly white alabastrum(diploid) 126.546
CNS0095593Slightly white alabastrum(diploid) 223.190
CNS0095594Slightly white alabastrum(diploid) 322.371
CNS0095595Whole white alabastrum(diploid) 224.882
CNS0095596Whole white alabastrum(diploid) 324.844
CNS0095597Whole white alabastrum(diploid) 428.942
CNS0095598Silvery flower (diploied) 120.393
CNS0095599Silvery flower (diploied) 215.942
CNS0095600Silvery flower (diploied) 333.323
CNS0095601Golden flower (diploid) 113.688
CNS0095602Golden flower (diploid) 230.798
CNS0095603Golden flower (diploid) 328.899
CNS0095604Slightly white alabastrum(tetraploid) 130.952
CNS0095605Slightly white alabastrum(tetraploid) 227.260
CNS0095606Slightly white alabastrum(tetraploid) 336.694
CNS0095607Whole white alabastrum(tetraploid) 129.020
CNS0095608Whole white alabastrum(tetraploid) 223.315
CNS0095609Whole white alabastrum(tetraploid) 331.856
CNS0095610Silvery flower (tetraploid) 128.371
CNS0095611Silvery flower (tetraploid) 225.422
CNS0095612Silvery flower (tetraploid) 325.239
CNS0095613Golden flower (tetraploid) 116.387
CNS0095614Golden flower (tetraploid) 221.698
CNS0095615Golden flower (tetraploid) 328.042
CRA001975CRR073297Stem 137.558
CRR073298Stem 232.916
CRR073299Stem 328.806
CRR073300Leaf 143.323
CRR073301Leaf 238.543
CRR073302Leaf 331.393
CRR073303Juvenile bud 134.564
CRR073304Juvenile bud 228.400
CRR073305Juvenile bud 338.231
CRR073306Third green 117.727
CRR073307Third green 216.850
CRR073308Third green 320.802
CRR073309Second white 113.408
CRR073310Second white 220.952
CRR073311Second white 319.587
CRR073312Silver flowering 116.031
CRR073313Silver flowering 214.855
CRR073314Silver flowering 315.480
CRR073315Gold flowering 124.162
CRR073316Gold flowering 236.721
CRR073317Gold flowering 318.343
CRR073318Tawny withering 134.455
CRR073319Tawny withering 231.080
CRR073320Tawny withering 334.224