Gene detail

Detail information of GWHGAAZE025833

Functional Annotation

Database	Orthologs	E value	Annotation
Nr	XP_010047483.1	1.4075E-147	PREDICTED: MOB kinase activator-like 1 [Eucalyptus grandis]
Swissprot	tr\|Q8GYX0\|MOB1_ARATH	2E-138	MOB kinase activator-like 1
trEMBL	tr\|A0A059CNC3\|A0A059CNC3_EUCGR	5E-148	Uncharacterized protein {ECO:0000313\|EMBL:KCW79415.1}
TAIR10	AT5G45550.1	4E-111	Mob1/phocein family protein

Location And Transcript Sequence (JBrowse)

Scaffold	Type	Start	End	Strand
GWHAAZE00000007	gene	68644192	68647288	+
GWHAAZE00000007	mRNA	68644192	68647288	+
GWHAAZE00000007	exon	68644192	68644217	+
GWHAAZE00000007	exon	68644950	68644998	+
GWHAAZE00000007	exon	68645298	68645406	+
GWHAAZE00000007	exon	68645979	68646072	+
GWHAAZE00000007	exon	68646371	68646504	+
GWHAAZE00000007	exon	68646590	68646753	+
GWHAAZE00000007	exon	68647220	68647288	+
GWHAAZE00000007	CDS	68644192	68644217	+
GWHAAZE00000007	CDS	68644950	68644998	+
GWHAAZE00000007	CDS	68645298	68645406	+
GWHAAZE00000007	CDS	68645979	68646072	+
GWHAAZE00000007	CDS	68646371	68646504	+
GWHAAZE00000007	CDS	68646590	68646753	+
GWHAAZE00000007	CDS	68647220	68647288	+

Transcript Sequence
>GWHTAAZE025867 ATGAGTCTCTTCGGCCTTGGAAGCAGAAATCAGAAAACTTTTCGACCTAAAAAGAGTGCTCCATCAGGAACTAAGGGCGCACAACTTCAAAAACACATTGATGCGACATTGGGTAGTGGCAACTTGAGGGAAGCCGTGCGTCTACCCCCTGGAGAAGATCTGAATGAGTGGCTAGCTGTATATACGGTTGACTTTTTTAATCAAGTCAACCTTCTTTATGGTACTCTTACGGAATTCTGCACGCCATCCACCTGTCCGACAATGAGTGCAGGAGCAAAATACGAGTATAGATGGGCTGACGGAGTTACCATAAAGAAACCGATAGAGGTATCCGCTCCTAAATATGTGGAGTACTTGATGGACTGGATTGAGGCTCAGCTTGATGATGAAACAATTTTTCCTCAAAAATTGGGTGCGCCATTTCCGTCCAATTTCTTTGATGTTGTGAAGACAATATTGAAGAGGTTATTTCGTGTATATGCCCATATCTATCACTCACATTTTCAGAAAATTGTGAGTTTGAAGGAAGAAGCTCATCTCAATACGTGCTTTAAGCATTTTGTTCTGTTTACATGGGAATTCCGCTTGATCGACAAGGGAGAACTTGCACCTCTCTCTGAGCTTGTGGAGTCTATTCTACAGTGA

Network for GWHGAAZE025833

Network category	Network	Top300 PCC genelist
Coexpression Positive	Network	Top300 PCC genelist
Coexpression Negative	Network	Top300 PCC genelist

Functional Module

Module ID	Function Annotation

Protein Structure

Pfam accession	Pfam name	Alignment start	Alignment end	E-value
PF03637.18	Mob1_phocein	35	205	1.30E-80

Protein Sequence

Gene family

Gene family	subfamily
--	--

KEGG pathway

KO	Enzyme	pathway	mapID
K06685	MOB1, Mats	Hippo signaling pathway	map04390
		Hippo signaling pathway - fly	map04391
		Hippo signaling pathway - multiple species	map04392
		Cell cycle - yeast	map04111

Gene Ontology

GO term	Ontology	Name

Expression pattern

Expression pattern detail

SRP	Sample	Description	TPM
SRP075780	SRR3591705	youngest leaf	12.472
	SRR3591706	second leaf	10.630
	SRR3591707	mature leaf	10.875
	SRR3591708	Shoot apex	8.961
	SRR3591709	Stem	8.218
	SRR3591710	White floral bud	46.361
	SRR3591711	White flower	15.843
	SRR3591712	Green floral bud	27.375
	SRR3591713	Yellow flower	16.835
SRP173429	SRR8316895	Juvenile bud stage	7.382
	SRR8316896	Juvenile bud stage	11.259
	SRR8316897	Juvenile bud stage	4.763
	SRR8316894	Third green stage	7.295
	SRR8316900	Third green stage	24.644
	SRR8316901	Third green stage	25.273
	SRR8316898	Complete white stage	5.189
	SRR8316899	Complete white stage	15.297
	SRR8316903	Complete white stage	5.226
	SRR8316902	Silver flowering stage	5.946
	SRR8316904	Silver flowering stage	7.222
	SRR8316905	Silver flowering stage	3.676
	SRR8316906	Gold flowering stage	7.447
	SRR8316907	Gold flowering stage	6.042
	SRR8316908	Gold flowering stage	6.031
SRP132670	SRR6706286	Control	20.926
	SRR6706287	Light intensity 50%	25.668
	SRR6706288	Light intensity 20%	27.273
CNP0000432	CNS0095592	Slightly white alabastrum(diploid) 1	23.335
	CNS0095593	Slightly white alabastrum(diploid) 2	31.967
	CNS0095594	Slightly white alabastrum(diploid) 3	24.981
	CNS0095595	Whole white alabastrum(diploid) 2	30.825
	CNS0095596	Whole white alabastrum(diploid) 3	33.083
	CNS0095597	Whole white alabastrum(diploid) 4	33.871
	CNS0095598	Silvery flower (diploied) 1	11.344
	CNS0095599	Silvery flower (diploied) 2	11.100
	CNS0095600	Silvery flower (diploied) 3	9.518
	CNS0095601	Golden flower (diploid) 1	12.786
	CNS0095602	Golden flower (diploid) 2	9.174
	CNS0095603	Golden flower (diploid) 3	7.246
	CNS0095604	Slightly white alabastrum(tetraploid) 1	31.821
	CNS0095605	Slightly white alabastrum(tetraploid) 2	28.787
	CNS0095606	Slightly white alabastrum(tetraploid) 3	25.532
	CNS0095607	Whole white alabastrum(tetraploid) 1	46.276
	CNS0095608	Whole white alabastrum(tetraploid) 2	58.874
	CNS0095609	Whole white alabastrum(tetraploid) 3	41.751
	CNS0095610	Silvery flower (tetraploid) 1	12.026
	CNS0095611	Silvery flower (tetraploid) 2	10.852
	CNS0095612	Silvery flower (tetraploid) 3	19.081
	CNS0095613	Golden flower (tetraploid) 1	13.744
	CNS0095614	Golden flower (tetraploid) 2	9.413
	CNS0095615	Golden flower (tetraploid) 3	10.075
CRA001975	CRR073297	Stem 1	6.241
	CRR073298	Stem 2	7.128
	CRR073299	Stem 3	7.914
	CRR073300	Leaf 1	12.801
	CRR073301	Leaf 2	12.030
	CRR073302	Leaf 3	14.948
	CRR073303	Juvenile bud 1	16.258
	CRR073304	Juvenile bud 2	11.810
	CRR073305	Juvenile bud 3	14.549
	CRR073306	Third green 1	17.626
	CRR073307	Third green 2	16.963
	CRR073308	Third green 3	17.979
	CRR073309	Second white 1	8.033
	CRR073310	Second white 2	3.985
	CRR073311	Second white 3	2.913
	CRR073312	Silver flowering 1	5.172
	CRR073313	Silver flowering 2	7.405
	CRR073314	Silver flowering 3	3.251
	CRR073315	Gold flowering 1	27.411
	CRR073316	Gold flowering 2	26.675
	CRR073317	Gold flowering 3	23.485
	CRR073318	Tawny withering 1	12.718
	CRR073319	Tawny withering 2	15.934
	CRR073320	Tawny withering 3	12.295