Detail information of GWHGAAZE025788


Functional Annotation

DatabaseOrthologsE valueAnnotation
NrABG38308.10NPR1 [Capsicum annuum]
Swissprottr|P93002|NPR1_ARATH0Regulatory protein NPR1
trEMBLtr|Q0ZAK2|Q0ZAK2_CAPAN0NPR1 {ECO:0000313|EMBL:ABG38308.1}
TAIR10AT1G64280.13E-152regulatory protein (NPR1)

Location And Transcript Sequence (JBrowse)

ScaffoldTypeStartEndStrand
GWHAAZE00000007gene6784437467848793-
GWHAAZE00000007mRNA6784437467848793-
GWHAAZE00000007exon6784437467844654-
GWHAAZE00000007exon6784529267845495-
GWHAAZE00000007exon6784611367846860-
GWHAAZE00000007exon6784831167848793-
GWHAAZE00000007CDS6784831167848793-
GWHAAZE00000007CDS6784611367846860-
GWHAAZE00000007CDS6784529267845495-
GWHAAZE00000007CDS6784437467844654-
Transcript Sequence

Network for GWHGAAZE025788

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist


Functional Module

Module IDFunction Annotation


Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF00651.32BTB371645.40E-12
PF11900.9DUF34202052491.90E-10
PF13637.7Ank_42763207.80E-05
PF12313.9NPR1_like_C3485532.20E-94
Protein Sequence

Gene family

Gene familysubfamily
Transcription Factors FamilyTRAF

KEGG pathway

KO Enzyme pathway mapID
K14508NPR1 Plant hormone signal transduction map04075

Gene Ontology

GO term OntologyName
GO:0005515molecular_functionprotein binding

Expression pattern


Expression pattern detail

SRPSampleDescriptionTPM
SRP075780SRR3591705youngest leaf9.093
SRR3591706second leaf5.402
SRR3591707mature leaf13.830
SRR3591708Shoot apex6.612
SRR3591709Stem13.879
SRR3591710White floral bud25.580
SRR3591711White flower30.954
SRR3591712Green floral bud17.753
SRR3591713Yellow flower25.385
SRP173429 SRR8316895Juvenile bud stage 6.446
SRR8316896Juvenile bud stage 10.171
SRR8316897Juvenile bud stage 4.437
SRR8316894Third green stage 6.545
SRR8316900Third green stage 21.479
SRR8316901Third green stage 21.960
SRR8316898Complete white stage 10.775
SRR8316899Complete white stage 24.840
SRR8316903Complete white stage 14.238
SRR8316902Silver flowering stage12.958
SRR8316904Silver flowering stage14.839
SRR8316905Silver flowering stage6.987
SRR8316906Gold flowering stage 25.201
SRR8316907Gold flowering stage 20.696
SRR8316908Gold flowering stage 24.370
SRP132670SRR6706286Control15.516
SRR6706287Light intensity 50%16.449
SRR6706288Light intensity 20%16.496
CNP0000432CNS0095592Slightly white alabastrum(diploid) 115.679
CNS0095593Slightly white alabastrum(diploid) 213.458
CNS0095594Slightly white alabastrum(diploid) 312.984
CNS0095595Whole white alabastrum(diploid) 217.506
CNS0095596Whole white alabastrum(diploid) 318.287
CNS0095597Whole white alabastrum(diploid) 418.171
CNS0095598Silvery flower (diploied) 118.700
CNS0095599Silvery flower (diploied) 216.488
CNS0095600Silvery flower (diploied) 332.214
CNS0095601Golden flower (diploid) 116.526
CNS0095602Golden flower (diploid) 229.391
CNS0095603Golden flower (diploid) 328.237
CNS0095604Slightly white alabastrum(tetraploid) 110.488
CNS0095605Slightly white alabastrum(tetraploid) 29.009
CNS0095606Slightly white alabastrum(tetraploid) 311.713
CNS0095607Whole white alabastrum(tetraploid) 19.989
CNS0095608Whole white alabastrum(tetraploid) 211.517
CNS0095609Whole white alabastrum(tetraploid) 311.225
CNS0095610Silvery flower (tetraploid) 126.714
CNS0095611Silvery flower (tetraploid) 225.623
CNS0095612Silvery flower (tetraploid) 322.096
CNS0095613Golden flower (tetraploid) 117.911
CNS0095614Golden flower (tetraploid) 222.594
CNS0095615Golden flower (tetraploid) 327.972
CRA001975CRR073297Stem 112.458
CRR073298Stem 214.680
CRR073299Stem 313.050
CRR073300Leaf 118.128
CRR073301Leaf 218.583
CRR073302Leaf 314.821
CRR073303Juvenile bud 116.489
CRR073304Juvenile bud 217.353
CRR073305Juvenile bud 311.539
CRR073306Third green 112.442
CRR073307Third green 28.719
CRR073308Third green 313.586
CRR073309Second white 112.964
CRR073310Second white 214.918
CRR073311Second white 315.302
CRR073312Silver flowering 111.270
CRR073313Silver flowering 29.706
CRR073314Silver flowering 311.243
CRR073315Gold flowering 123.715
CRR073316Gold flowering 229.599
CRR073317Gold flowering 316.222
CRR073318Tawny withering 119.640
CRR073319Tawny withering 219.774
CRR073320Tawny withering 312.337