Detail information of GWHGAAZE025746


Functional Annotation

DatabaseOrthologsE valueAnnotation
NrKDO59271.11.78168E-21hypothetical protein CISIN_1g001451mg [Citrus sinensis]
trEMBLtr|A0A067F7X6|A0A067F7X6_CITSI7E-22Uncharacterized protein {ECO:0000313|EMBL:KDO59271.1}
TAIR10AT2G14830.10.000004Regulator of Vps4 activity in the MVB pathway protein

Location And Transcript Sequence (JBrowse)

ScaffoldTypeStartEndStrand
GWHAAZE00000007gene6715915167161139-
GWHAAZE00000007mRNA6715915167161139-
GWHAAZE00000007exon6715915167161139-
GWHAAZE00000007CDS6715915167161139-
Transcript Sequence

Network for GWHGAAZE025746

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist


Functional Module

Module IDFunction Annotation


Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
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Protein Sequence

Gene family

Gene familysubfamily
----

KEGG pathway

KO Enzyme pathway mapID
K19476IST1 Endocytosis map04144

Gene Ontology

GO term OntologyName

Expression pattern


Expression pattern detail

SRPSampleDescriptionTPM
SRP075780SRR3591705youngest leaf62.527
SRR3591706second leaf20.329
SRR3591707mature leaf18.013
SRR3591708Shoot apex25.996
SRR3591709Stem60.045
SRR3591710White floral bud50.006
SRR3591711White flower53.722
SRR3591712Green floral bud56.384
SRR3591713Yellow flower39.002
SRP173429 SRR8316895Juvenile bud stage 61.912
SRR8316896Juvenile bud stage 49.878
SRR8316897Juvenile bud stage 44.840
SRR8316894Third green stage 16.533
SRR8316900Third green stage 40.079
SRR8316901Third green stage 60.873
SRR8316898Complete white stage 16.888
SRR8316899Complete white stage 72.804
SRR8316903Complete white stage 39.873
SRR8316902Silver flowering stage24.431
SRR8316904Silver flowering stage29.404
SRR8316905Silver flowering stage16.901
SRR8316906Gold flowering stage 63.610
SRR8316907Gold flowering stage 58.215
SRR8316908Gold flowering stage 53.141
SRP132670SRR6706286Control29.292
SRR6706287Light intensity 50%30.579
SRR6706288Light intensity 20%29.757
CNP0000432CNS0095592Slightly white alabastrum(diploid) 134.993
CNS0095593Slightly white alabastrum(diploid) 242.108
CNS0095594Slightly white alabastrum(diploid) 337.237
CNS0095595Whole white alabastrum(diploid) 231.480
CNS0095596Whole white alabastrum(diploid) 315.195
CNS0095597Whole white alabastrum(diploid) 430.623
CNS0095598Silvery flower (diploied) 158.736
CNS0095599Silvery flower (diploied) 267.875
CNS0095600Silvery flower (diploied) 377.998
CNS0095601Golden flower (diploid) 181.784
CNS0095602Golden flower (diploid) 291.835
CNS0095603Golden flower (diploid) 388.502
CNS0095604Slightly white alabastrum(tetraploid) 114.735
CNS0095605Slightly white alabastrum(tetraploid) 214.196
CNS0095606Slightly white alabastrum(tetraploid) 322.324
CNS0095607Whole white alabastrum(tetraploid) 19.596
CNS0095608Whole white alabastrum(tetraploid) 214.313
CNS0095609Whole white alabastrum(tetraploid) 324.777
CNS0095610Silvery flower (tetraploid) 132.118
CNS0095611Silvery flower (tetraploid) 236.019
CNS0095612Silvery flower (tetraploid) 364.819
CNS0095613Golden flower (tetraploid) 130.030
CNS0095614Golden flower (tetraploid) 227.928
CNS0095615Golden flower (tetraploid) 368.811
CRA001975CRR073297Stem 129.538
CRR073298Stem 231.199
CRR073299Stem 326.588
CRR073300Leaf 154.759
CRR073301Leaf 264.276
CRR073302Leaf 327.204
CRR073303Juvenile bud 143.257
CRR073304Juvenile bud 243.703
CRR073305Juvenile bud 375.287
CRR073306Third green 137.451
CRR073307Third green 233.639
CRR073308Third green 341.399
CRR073309Second white 135.191
CRR073310Second white 249.392
CRR073311Second white 343.712
CRR073312Silver flowering 174.261
CRR073313Silver flowering 274.664
CRR073314Silver flowering 367.999
CRR073315Gold flowering 117.780
CRR073316Gold flowering 230.965
CRR073317Gold flowering 318.996
CRR073318Tawny withering 139.565
CRR073319Tawny withering 263.578
CRR073320Tawny withering 355.656