Detail information of GWHGAAZE025732


Functional Annotation

DatabaseOrthologsE valueAnnotation
NrCDP03225.10unnamed protein product [Coffea canephora]
COGNP_486091.12E-92gamma-glutamyltranspeptidase
Swissprottr|Q9M0G0|GAGT3_ARATH0Gamma-glutamyltranspeptidase 3
trEMBLtr|A0A068U3X4|A0A068U3X4_COFCA0Coffea canephora DH200=94 genomic scaffold, scaffold_9 {ECO:0000313|EMBL:CDP03225.1}
TAIR10AT4G29210.10gamma-glutamyl transpeptidase 4

Location And Transcript Sequence (JBrowse)

ScaffoldTypeStartEndStrand
GWHAAZE00000007gene6690894766916345-
GWHAAZE00000007mRNA6690894766916345-
GWHAAZE00000007exon6691620066916345-
GWHAAZE00000007exon6691290566913242-
GWHAAZE00000007exon6691172166912243-
GWHAAZE00000007exon6691036266910596-
GWHAAZE00000007exon6691001066910274-
GWHAAZE00000007exon6690977266909909-
GWHAAZE00000007exon6690894766909216-
GWHAAZE00000007five_prime_UTR6691632466916345-
GWHAAZE00000007CDS6691620066916323-
GWHAAZE00000007CDS6691290566913242-
GWHAAZE00000007CDS6691172166912243-
GWHAAZE00000007CDS6691036266910596-
GWHAAZE00000007CDS6691001066910274-
GWHAAZE00000007CDS6690977266909909-
GWHAAZE00000007CDS6690894766909216-
Transcript Sequence

Network for GWHGAAZE025732

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist


Functional Module

Module IDFunction Annotation


Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF01019.22G_glu_transpept946255.50E-164
Protein Sequence

Gene family

Gene familysubfamily
----

KEGG pathway

KO Enzyme pathway mapID
K18592GGT1_5, CD224 Metabolic pathways map01100
Arachidonic acid metabolismmap00590
Taurine and hypotaurine metabolismmap00430
Cyanoamino acid metabolismmap00460
Glutathione metabolismmap00480

Gene Ontology

GO term OntologyName
GO:0006751biological_processglutathione catabolic process
GO:0036374molecular_functionglutathione hydrolase activity

Expression pattern


Expression pattern detail

SRPSampleDescriptionTPM
SRP075780SRR3591705youngest leaf15.434
SRR3591706second leaf15.206
SRR3591707mature leaf21.472
SRR3591708Shoot apex13.720
SRR3591709Stem33.520
SRR3591710White floral bud41.820
SRR3591711White flower49.951
SRR3591712Green floral bud25.715
SRR3591713Yellow flower103.033
SRP173429 SRR8316895Juvenile bud stage 10.163
SRR8316896Juvenile bud stage 16.625
SRR8316897Juvenile bud stage 4.637
SRR8316894Third green stage 4.364
SRR8316900Third green stage 11.426
SRR8316901Third green stage 13.224
SRR8316898Complete white stage 15.642
SRR8316899Complete white stage 31.018
SRR8316903Complete white stage 23.438
SRR8316902Silver flowering stage14.414
SRR8316904Silver flowering stage17.804
SRR8316905Silver flowering stage10.341
SRR8316906Gold flowering stage 44.192
SRR8316907Gold flowering stage 35.862
SRR8316908Gold flowering stage 35.348
SRP132670SRR6706286Control16.959
SRR6706287Light intensity 50%18.220
SRR6706288Light intensity 20%17.294
CNP0000432CNS0095592Slightly white alabastrum(diploid) 18.701
CNS0095593Slightly white alabastrum(diploid) 29.136
CNS0095594Slightly white alabastrum(diploid) 310.794
CNS0095595Whole white alabastrum(diploid) 27.328
CNS0095596Whole white alabastrum(diploid) 35.214
CNS0095597Whole white alabastrum(diploid) 48.001
CNS0095598Silvery flower (diploied) 114.276
CNS0095599Silvery flower (diploied) 213.626
CNS0095600Silvery flower (diploied) 320.884
CNS0095601Golden flower (diploid) 111.551
CNS0095602Golden flower (diploid) 221.184
CNS0095603Golden flower (diploid) 320.328
CNS0095604Slightly white alabastrum(tetraploid) 110.714
CNS0095605Slightly white alabastrum(tetraploid) 26.839
CNS0095606Slightly white alabastrum(tetraploid) 322.187
CNS0095607Whole white alabastrum(tetraploid) 17.945
CNS0095608Whole white alabastrum(tetraploid) 26.934
CNS0095609Whole white alabastrum(tetraploid) 315.280
CNS0095610Silvery flower (tetraploid) 129.924
CNS0095611Silvery flower (tetraploid) 221.232
CNS0095612Silvery flower (tetraploid) 346.893
CNS0095613Golden flower (tetraploid) 120.132
CNS0095614Golden flower (tetraploid) 226.875
CNS0095615Golden flower (tetraploid) 321.870
CRA001975CRR073297Stem 112.865
CRR073298Stem 212.524
CRR073299Stem 314.082
CRR073300Leaf 116.430
CRR073301Leaf 211.785
CRR073302Leaf 310.525
CRR073303Juvenile bud 110.472
CRR073304Juvenile bud 215.685
CRR073305Juvenile bud 315.332
CRR073306Third green 130.302
CRR073307Third green 217.828
CRR073308Third green 326.422
CRR073309Second white 121.068
CRR073310Second white 228.421
CRR073311Second white 329.688
CRR073312Silver flowering 128.537
CRR073313Silver flowering 228.103
CRR073314Silver flowering 331.946
CRR073315Gold flowering 113.044
CRR073316Gold flowering 218.313
CRR073317Gold flowering 315.038
CRR073318Tawny withering 127.754
CRR073319Tawny withering 232.988
CRR073320Tawny withering 329.170