Detail information of GWHGAAZE025723


Functional Annotation

DatabaseOrthologsE valueAnnotation
NrXP_006583560.11.58539E-83PREDICTED: profilin-like [Glycine max]
Swissprottr|A4GDU5|PROBM_OLEEU2E-84Profilin-2
trEMBLtr|I1KJR5|I1KJR5_SOYBN6E-84Profilin {ECO:0000256|RuleBase:RU003909}
TAIR10AT2G19770.12E-51profilin 5

Location And Transcript Sequence (JBrowse)

ScaffoldTypeStartEndStrand
GWHAAZE00000007gene6678094166783463-
GWHAAZE00000007mRNA6678094166783463-
GWHAAZE00000007exon6678094166781075-
GWHAAZE00000007exon6678258466782721-
GWHAAZE00000007exon6678333566783463-
GWHAAZE00000007CDS6678333566783463-
GWHAAZE00000007CDS6678258466782721-
GWHAAZE00000007CDS6678094166781075-
Transcript Sequence

Network for GWHGAAZE025723

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist


Functional Module

Module IDFunction Annotation


Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF00235.20Profilin11321.40E-42
Protein Sequence

Gene family

Gene familysubfamily
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KEGG pathway

KO Enzyme pathway mapID
K05759PFN Rap1 signaling pathway map04015
MAPK signaling pathway - flymap04013
Regulation of actin cytoskeletonmap04810

Gene Ontology

GO term OntologyName
GO:0003779molecular_functionactin binding

Expression pattern


Expression pattern detail

SRPSampleDescriptionTPM
SRP075780SRR3591705youngest leaf0.000
SRR3591706second leaf0.144
SRR3591707mature leaf0.000
SRR3591708Shoot apex1.050
SRR3591709Stem1.515
SRR3591710White floral bud162.678
SRR3591711White flower5.752
SRR3591712Green floral bud222.815
SRR3591713Yellow flower2.225
SRP173429 SRR8316895Juvenile bud stage 23.597
SRR8316896Juvenile bud stage 52.980
SRR8316897Juvenile bud stage 32.380
SRR8316894Third green stage 25.863
SRR8316900Third green stage 167.449
SRR8316901Third green stage 184.944
SRR8316898Complete white stage 1.094
SRR8316899Complete white stage 2.724
SRR8316903Complete white stage 0.755
SRR8316902Silver flowering stage0.984
SRR8316904Silver flowering stage3.049
SRR8316905Silver flowering stage1.375
SRR8316906Gold flowering stage 0.552
SRR8316907Gold flowering stage 0.000
SRR8316908Gold flowering stage 0.000
SRP132670SRR6706286Control105.381
SRR6706287Light intensity 50%101.220
SRR6706288Light intensity 20%95.728
CNP0000432CNS0095592Slightly white alabastrum(diploid) 1129.819
CNS0095593Slightly white alabastrum(diploid) 282.008
CNS0095594Slightly white alabastrum(diploid) 3142.677
CNS0095595Whole white alabastrum(diploid) 2233.490
CNS0095596Whole white alabastrum(diploid) 3292.199
CNS0095597Whole white alabastrum(diploid) 4251.588
CNS0095598Silvery flower (diploied) 16.329
CNS0095599Silvery flower (diploied) 215.935
CNS0095600Silvery flower (diploied) 35.167
CNS0095601Golden flower (diploid) 17.362
CNS0095602Golden flower (diploid) 24.190
CNS0095603Golden flower (diploid) 33.079
CNS0095604Slightly white alabastrum(tetraploid) 1198.547
CNS0095605Slightly white alabastrum(tetraploid) 2194.155
CNS0095606Slightly white alabastrum(tetraploid) 30.684
CNS0095607Whole white alabastrum(tetraploid) 1398.694
CNS0095608Whole white alabastrum(tetraploid) 2469.019
CNS0095609Whole white alabastrum(tetraploid) 3235.061
CNS0095610Silvery flower (tetraploid) 10.751
CNS0095611Silvery flower (tetraploid) 210.998
CNS0095612Silvery flower (tetraploid) 333.595
CNS0095613Golden flower (tetraploid) 13.812
CNS0095614Golden flower (tetraploid) 20.878
CNS0095615Golden flower (tetraploid) 321.603
CRA001975CRR073297Stem 197.106
CRR073298Stem 265.615
CRR073299Stem 3186.786
CRR073300Leaf 1113.002
CRR073301Leaf 296.065
CRR073302Leaf 384.173
CRR073303Juvenile bud 1119.111
CRR073304Juvenile bud 2192.025
CRR073305Juvenile bud 38.152
CRR073306Third green 157.852
CRR073307Third green 2101.850
CRR073308Third green 368.959
CRR073309Second white 14.441
CRR073310Second white 29.595
CRR073311Second white 39.151
CRR073312Silver flowering 139.799
CRR073313Silver flowering 266.653
CRR073314Silver flowering 316.679
CRR073315Gold flowering 171.309
CRR073316Gold flowering 210.208
CRR073317Gold flowering 349.942
CRR073318Tawny withering 143.812
CRR073319Tawny withering 237.680
CRR073320Tawny withering 350.178