Detail information of GWHGAAZE025707


Functional Annotation

DatabaseOrthologsE valueAnnotation
NrXP_002325023.27.25339E-40hypothetical protein POPTR_0018s09420g [Populus trichocarpa]
COGYP_004773128.11E-21ABC transporter
Swissprottr|Q9SGY1|AB10B_ARATH2E-26ABC transporter B family member 10
trEMBLtr|B9ILT9|B9ILT9_POPTR3E-40Uncharacterized protein {ECO:0000313|EMBL:EEF03588.2}
TAIR10AT1G10680.13E-23P-glycoprotein 10

Location And Transcript Sequence (JBrowse)

ScaffoldTypeStartEndStrand
GWHAAZE00000007gene6648107766481325-
GWHAAZE00000007mRNA6648107766481325-
GWHAAZE00000007exon6648107766481325-
GWHAAZE00000007CDS6648107766481325-
Transcript Sequence

Network for GWHGAAZE025707

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist


Functional Module

Module IDFunction Annotation


Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
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Protein Sequence

Gene family

Gene familysubfamily
----

KEGG pathway

KO Enzyme pathway mapID
K05658ABCB1, CD243 ABC transporters map02010
Bile secretionmap04976

Gene Ontology

GO term OntologyName

Expression pattern


Expression pattern detail

SRPSampleDescriptionTPM
SRP075780SRR3591705youngest leaf4.179
SRR3591706second leaf0.513
SRR3591707mature leaf4.167
SRR3591708Shoot apex2.252
SRR3591709Stem9.347
SRR3591710White floral bud51.442
SRR3591711White flower27.973
SRR3591712Green floral bud119.078
SRR3591713Yellow flower24.121
SRP173429 SRR8316895Juvenile bud stage 9.822
SRR8316896Juvenile bud stage 27.013
SRR8316897Juvenile bud stage 11.644
SRR8316894Third green stage 22.465
SRR8316900Third green stage 109.491
SRR8316901Third green stage 113.674
SRR8316898Complete white stage 20.292
SRR8316899Complete white stage 155.011
SRR8316903Complete white stage 34.399
SRR8316902Silver flowering stage4.197
SRR8316904Silver flowering stage8.454
SRR8316905Silver flowering stage3.197
SRR8316906Gold flowering stage 8.484
SRR8316907Gold flowering stage 9.921
SRR8316908Gold flowering stage 25.238
SRP132670SRR6706286Control61.799
SRR6706287Light intensity 50%70.831
SRR6706288Light intensity 20%78.395
CNP0000432CNS0095592Slightly white alabastrum(diploid) 125.301
CNS0095593Slightly white alabastrum(diploid) 266.366
CNS0095594Slightly white alabastrum(diploid) 319.286
CNS0095595Whole white alabastrum(diploid) 272.279
CNS0095596Whole white alabastrum(diploid) 382.822
CNS0095597Whole white alabastrum(diploid) 465.516
CNS0095598Silvery flower (diploied) 114.708
CNS0095599Silvery flower (diploied) 214.253
CNS0095600Silvery flower (diploied) 320.489
CNS0095601Golden flower (diploid) 16.487
CNS0095602Golden flower (diploid) 235.827
CNS0095603Golden flower (diploid) 336.203
CNS0095604Slightly white alabastrum(tetraploid) 161.518
CNS0095605Slightly white alabastrum(tetraploid) 235.706
CNS0095606Slightly white alabastrum(tetraploid) 369.782
CNS0095607Whole white alabastrum(tetraploid) 138.713
CNS0095608Whole white alabastrum(tetraploid) 245.876
CNS0095609Whole white alabastrum(tetraploid) 354.941
CNS0095610Silvery flower (tetraploid) 19.894
CNS0095611Silvery flower (tetraploid) 213.355
CNS0095612Silvery flower (tetraploid) 311.006
CNS0095613Golden flower (tetraploid) 18.826
CNS0095614Golden flower (tetraploid) 215.460
CNS0095615Golden flower (tetraploid) 36.033
CRA001975CRR073297Stem 126.968
CRR073298Stem 233.336
CRR073299Stem 322.238
CRR073300Leaf 1207.957
CRR073301Leaf 2143.962
CRR073302Leaf 398.061
CRR073303Juvenile bud 1241.722
CRR073304Juvenile bud 290.073
CRR073305Juvenile bud 3227.682
CRR073306Third green 110.350
CRR073307Third green 226.120
CRR073308Third green 328.718
CRR073309Second white 11.349
CRR073310Second white 24.616
CRR073311Second white 31.697
CRR073312Silver flowering 13.358
CRR073313Silver flowering 24.047
CRR073314Silver flowering 35.193
CRR073315Gold flowering 10.063
CRR073316Gold flowering 20.754
CRR073317Gold flowering 32.221
CRR073318Tawny withering 19.947
CRR073319Tawny withering 26.125
CRR073320Tawny withering 39.764