Detail information of GWHGAAZE025554


Functional Annotation

DatabaseOrthologsE valueAnnotation
NrXP_011019319.11.1352E-141PREDICTED: NADH-cytochrome b5 reductase-like protein [Populus euphratica]
COGYP_003542662.12E-21oxidoreductase FAD/NAD(P)-binding domain protein
Swissprottr|P83291|NB5R2_ARATH5E-137NADH-cytochrome b5 reductase-like protein
trEMBLtr|A0A061GPB2|A0A061GPB2_THECC2E-140NADH-cytochrome b5 reductase {ECO:0000256|RuleBase:RU361226}
TAIR10AT5G20080.11E-109FAD/NAD(P)-binding oxidoreductase

Location And Transcript Sequence (JBrowse)

ScaffoldTypeStartEndStrand
GWHAAZE00000007gene6319446063203256-
GWHAAZE00000007mRNA6319446063203256-
GWHAAZE00000007exon6320314763203256-
GWHAAZE00000007exon6320296263203012-
GWHAAZE00000007exon6320098763201041-
GWHAAZE00000007exon6320080863200878-
GWHAAZE00000007exon6320067463200725-
GWHAAZE00000007exon6319907663199153-
GWHAAZE00000007exon6319609163196180-
GWHAAZE00000007exon6319572463195837-
GWHAAZE00000007exon6319446063194534-
GWHAAZE00000007CDS6320314763203256-
GWHAAZE00000007CDS6320296263203012-
GWHAAZE00000007CDS6320098763201041-
GWHAAZE00000007CDS6320080863200878-
GWHAAZE00000007CDS6320067463200725-
GWHAAZE00000007CDS6319907663199153-
GWHAAZE00000007CDS6319609163196180-
GWHAAZE00000007CDS6319572463195837-
GWHAAZE00000007CDS6319446063194534-
Transcript Sequence

Network for GWHGAAZE025554

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist


Functional Module

Module IDFunction Annotation


Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF00970.25FAD_binding_6221032.30E-19
PF00175.22NAD_binding_11132191.30E-30
Protein Sequence

Gene family

Gene familysubfamily
----

KEGG pathway

KO Enzyme pathway mapID
K00326E1.6.2.2 Amino sugar and nucleotide sugar metabolism map00520

Gene Ontology

GO term OntologyName
GO:0055114biological_processoxidation-reduction process
GO:0016491molecular_functionoxidoreductase activity

Expression pattern


Expression pattern detail

SRPSampleDescriptionTPM
SRP075780SRR3591705youngest leaf94.755
SRR3591706second leaf33.236
SRR3591707mature leaf17.959
SRR3591708Shoot apex55.309
SRR3591709Stem50.600
SRR3591710White floral bud55.347
SRR3591711White flower66.209
SRR3591712Green floral bud97.215
SRR3591713Yellow flower43.200
SRP173429 SRR8316895Juvenile bud stage 51.857
SRR8316896Juvenile bud stage 69.254
SRR8316897Juvenile bud stage 42.342
SRR8316894Third green stage 33.683
SRR8316900Third green stage 125.079
SRR8316901Third green stage 110.622
SRR8316898Complete white stage 32.271
SRR8316899Complete white stage 72.019
SRR8316903Complete white stage 41.505
SRR8316902Silver flowering stage38.520
SRR8316904Silver flowering stage44.920
SRR8316905Silver flowering stage17.360
SRR8316906Gold flowering stage 51.346
SRR8316907Gold flowering stage 57.113
SRR8316908Gold flowering stage 73.765
SRP132670SRR6706286Control53.610
SRR6706287Light intensity 50%65.410
SRR6706288Light intensity 20%66.694
CNP0000432CNS0095592Slightly white alabastrum(diploid) 168.336
CNS0095593Slightly white alabastrum(diploid) 277.346
CNS0095594Slightly white alabastrum(diploid) 373.536
CNS0095595Whole white alabastrum(diploid) 281.978
CNS0095596Whole white alabastrum(diploid) 391.872
CNS0095597Whole white alabastrum(diploid) 467.879
CNS0095598Silvery flower (diploied) 141.505
CNS0095599Silvery flower (diploied) 246.017
CNS0095600Silvery flower (diploied) 354.255
CNS0095601Golden flower (diploid) 138.708
CNS0095602Golden flower (diploid) 247.983
CNS0095603Golden flower (diploid) 342.647
CNS0095604Slightly white alabastrum(tetraploid) 196.410
CNS0095605Slightly white alabastrum(tetraploid) 285.058
CNS0095606Slightly white alabastrum(tetraploid) 380.445
CNS0095607Whole white alabastrum(tetraploid) 174.283
CNS0095608Whole white alabastrum(tetraploid) 269.551
CNS0095609Whole white alabastrum(tetraploid) 382.689
CNS0095610Silvery flower (tetraploid) 152.275
CNS0095611Silvery flower (tetraploid) 249.212
CNS0095612Silvery flower (tetraploid) 349.758
CNS0095613Golden flower (tetraploid) 131.210
CNS0095614Golden flower (tetraploid) 241.054
CNS0095615Golden flower (tetraploid) 319.065
CRA001975CRR073297Stem 170.002
CRR073298Stem 261.087
CRR073299Stem 359.994
CRR073300Leaf 171.104
CRR073301Leaf 261.877
CRR073302Leaf 363.714
CRR073303Juvenile bud 165.746
CRR073304Juvenile bud 254.137
CRR073305Juvenile bud 347.954
CRR073306Third green 126.355
CRR073307Third green 228.313
CRR073308Third green 328.702
CRR073309Second white 133.656
CRR073310Second white 223.540
CRR073311Second white 320.639
CRR073312Silver flowering 126.688
CRR073313Silver flowering 222.924
CRR073314Silver flowering 324.156
CRR073315Gold flowering 130.866
CRR073316Gold flowering 229.307
CRR073317Gold flowering 322.911
CRR073318Tawny withering 151.706
CRR073319Tawny withering 262.801
CRR073320Tawny withering 364.884