Gene detail

Detail information of GWHGAAZE025449

Functional Annotation

Database	Orthologs	E value	Annotation
Nr	XP_011098929.1	0	PREDICTED: probable protein S-acyltransferase 7 [Sesamum indicum]
Swissprot	tr\|Q0WQK2\|ZDHC9_ARATH	7E-168	Probable protein S-acyltransferase 7
trEMBL	tr\|M5XBX5\|M5XBX5_PRUPE	0	S-acyltransferase {ECO:0000256\|RuleBase:RU079119}
TAIR10	AT3G26935.1	2E-110	DHHC-type zinc finger family protein

Location And Transcript Sequence (JBrowse)

Scaffold	Type	Start	End	Strand
GWHAAZE00000007	gene	61320515	61325025	+
GWHAAZE00000007	mRNA	61320515	61325025	+
GWHAAZE00000007	exon	61320515	61320697	+
GWHAAZE00000007	exon	61322119	61322415	+
GWHAAZE00000007	exon	61323716	61324324	+
GWHAAZE00000007	exon	61324945	61325025	+
GWHAAZE00000007	CDS	61320515	61320697	+
GWHAAZE00000007	CDS	61322119	61322415	+
GWHAAZE00000007	CDS	61323716	61324324	+
GWHAAZE00000007	CDS	61324945	61325025	+

Transcript Sequence
>GWHTAAZE025483 AAATTTTTTCTTCAGGGAAGGTTCATATTTGGACCAGATGTAAGATCGCTTGCGTTGACCATATTCCTCATCGTGGCTCCTGTCACAATTTTCTGTGTTTTTGTTGCTAGAAAACTGATGGACGATTATTCTCACCACTCTGGGATATCTATTATGGTTGTGCCTGTTTTATTCACCCTCTATGTTTTAGTTCTTCTCCTGCTAACATCTGGAAGAGATCCTGGTATAATTCCTCGTAATGCGCACCCTCCAGAACCAGAAGGCTATGATGGGAATGCAGAAGGTGGTGGCGGCCAAACTCCACAGTTACGACTGCCACGCATCAAGGAAGTTGAAGTCAACGGCATTAAAGTCAAAATCAAGTATTGTGATACGTGCATGCTTTATAGACCTCCTCGCTGCTCACATTGTTCCATTTGCAACAACTGTGTCGAAAGATTTGACCATCACTGTCCTTGGGTTGGACAATGCATCGGGCGGTGTACTGGGGAGGGCAGGTTTGAAGCAACATTGCTATATCTGATTATACTTTCTCTAGAAAGGCAGAAACTAACAGAACTTTTTTTTTTCCAAATTTGTCAGACTACATATGAGAATTTTCGATATCGATATGATCGAAGAGCGAATCCTTATAACAAAGGAGTTGTAGAAAACTTCAAAGAGATATTCTGCACAAGCATTCCTCCATCAAAGAACAATTTCAGGTTAAAGGTACCGAGGGAAACAGGGTTACCAGGTCGGTCAGTTGGCGGTGGTTTTGTTAGTCCAAGCATGGGAAAAGTTGTGGAGGACATTGAAATGGGCCGGAAAACCGTGTGGGGAGATGTGGGGGCCGGGGCAGATCGTCGTGCGGGGCAAAACAGTGACAGTGAAGGCCCAAACATGAAGGATGGCGGATTAGGGGAATCGTCACCAGAGATACGTACTACTGTGGATGAGGGTGATCGCGTGGGAATACACCCCAGGCGATCCAGTTGGGGTAGAAAAAGCGGAAGCTGGGAAATGTCACCTGAGGTTCTTGCTTTGGCATCTAGAGTGGGTGAATCGAACCGAATAGGTGGGACCAGTTCCCGCCCTGCAGATCCCAAGGAAGGTCTTGTTTGGTATGTTCATTGTTTGGTGGATTTCCGTGACAATCGCTCTCATGGAGAAGCTATTGAAAATGACTGA

Network for GWHGAAZE025449

Network category	Network	Top300 PCC genelist
Coexpression Positive	Network	Top300 PCC genelist
Coexpression Negative	Network	Top300 PCC genelist

Functional Module

Module ID	Function Annotation

Protein Structure

Pfam accession	Pfam name	Alignment start	Alignment end	E-value
PF01529.21	DHHC	120	204	1.90E-20

Protein Sequence

Gene family

Gene family	subfamily
--	--

KEGG pathway

KO	Enzyme	pathway	mapID
K16675	ZDHHC9_14_18	Hippo signaling pathway - fly	map04391

Gene Ontology

GO term	Ontology	Name
GO:0016409	molecular_function	palmitoyltransferase activity

Expression pattern

Expression pattern detail

SRP	Sample	Description	TPM
SRP075780	SRR3591705	youngest leaf	102.119
	SRR3591706	second leaf	40.213
	SRR3591707	mature leaf	27.282
	SRR3591708	Shoot apex	75.593
	SRR3591709	Stem	67.735
	SRR3591710	White floral bud	45.416
	SRR3591711	White flower	21.918
	SRR3591712	Green floral bud	70.386
	SRR3591713	Yellow flower	9.233
SRP173429	SRR8316895	Juvenile bud stage	29.923
	SRR8316896	Juvenile bud stage	37.823
	SRR8316897	Juvenile bud stage	15.318
	SRR8316894	Third green stage	17.607
	SRR8316900	Third green stage	49.222
	SRR8316901	Third green stage	52.716
	SRR8316898	Complete white stage	23.791
	SRR8316899	Complete white stage	105.468
	SRR8316903	Complete white stage	33.605
	SRR8316902	Silver flowering stage	9.461
	SRR8316904	Silver flowering stage	17.373
	SRR8316905	Silver flowering stage	6.519
	SRR8316906	Gold flowering stage	15.566
	SRR8316907	Gold flowering stage	11.942
	SRR8316908	Gold flowering stage	14.317
SRP132670	SRR6706286	Control	62.012
	SRR6706287	Light intensity 50%	63.933
	SRR6706288	Light intensity 20%	69.974
CNP0000432	CNS0095592	Slightly white alabastrum(diploid) 1	41.061
	CNS0095593	Slightly white alabastrum(diploid) 2	55.178
	CNS0095594	Slightly white alabastrum(diploid) 3	38.276
	CNS0095595	Whole white alabastrum(diploid) 2	39.998
	CNS0095596	Whole white alabastrum(diploid) 3	33.372
	CNS0095597	Whole white alabastrum(diploid) 4	39.677
	CNS0095598	Silvery flower (diploied) 1	38.488
	CNS0095599	Silvery flower (diploied) 2	27.258
	CNS0095600	Silvery flower (diploied) 3	33.323
	CNS0095601	Golden flower (diploid) 1	32.554
	CNS0095602	Golden flower (diploid) 2	31.945
	CNS0095603	Golden flower (diploid) 3	31.362
	CNS0095604	Slightly white alabastrum(tetraploid) 1	62.272
	CNS0095605	Slightly white alabastrum(tetraploid) 2	48.922
	CNS0095606	Slightly white alabastrum(tetraploid) 3	140.277
	CNS0095607	Whole white alabastrum(tetraploid) 1	36.946
	CNS0095608	Whole white alabastrum(tetraploid) 2	32.254
	CNS0095609	Whole white alabastrum(tetraploid) 3	78.182
	CNS0095610	Silvery flower (tetraploid) 1	28.339
	CNS0095611	Silvery flower (tetraploid) 2	30.387
	CNS0095612	Silvery flower (tetraploid) 3	26.418
	CNS0095613	Golden flower (tetraploid) 1	9.159
	CNS0095614	Golden flower (tetraploid) 2	19.425
	CNS0095615	Golden flower (tetraploid) 3	6.958
CRA001975	CRR073297	Stem 1	60.172
	CRR073298	Stem 2	62.453
	CRR073299	Stem 3	69.405
	CRR073300	Leaf 1	85.666
	CRR073301	Leaf 2	74.566
	CRR073302	Leaf 3	70.011
	CRR073303	Juvenile bud 1	90.723
	CRR073304	Juvenile bud 2	70.446
	CRR073305	Juvenile bud 3	118.704
	CRR073306	Third green 1	38.409
	CRR073307	Third green 2	46.895
	CRR073308	Third green 3	38.119
	CRR073309	Second white 1	13.659
	CRR073310	Second white 2	11.577
	CRR073311	Second white 3	6.909
	CRR073312	Silver flowering 1	2.984
	CRR073313	Silver flowering 2	5.947
	CRR073314	Silver flowering 3	4.134
	CRR073315	Gold flowering 1	26.577
	CRR073316	Gold flowering 2	38.182
	CRR073317	Gold flowering 3	42.643
	CRR073318	Tawny withering 1	70.053
	CRR073319	Tawny withering 2	46.438
	CRR073320	Tawny withering 3	81.379