Detail information of GWHGAAZE025441


Functional Annotation

DatabaseOrthologsE valueAnnotation
NrXP_010110925.10hypothetical protein L484_005656 [Morus notabilis]
Swissprottr|Q8S4W7|GAI1_VITVI2E-104DELLA protein GAI1
trEMBLtr|W9S6I4|W9S6I4_9ROSA0Uncharacterized protein {ECO:0000313|EMBL:EXC29148.1}
TAIR10AT1G66350.17E-83RGA-like 1

Location And Transcript Sequence (JBrowse)

ScaffoldTypeStartEndStrand
GWHAAZE00000007gene6123272961235403+
GWHAAZE00000007mRNA6123272961235403+
GWHAAZE00000007exon6123272961233391+
GWHAAZE00000007exon6123402161235177+
GWHAAZE00000007exon6123536461235403+
GWHAAZE00000007CDS6123272961233391+
GWHAAZE00000007CDS6123402161235177+
GWHAAZE00000007CDS6123536461235403+
Transcript Sequence

Network for GWHGAAZE025441

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist


Functional Module

Module IDFunction Annotation


Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF03514.15GRAS2295932.50E-131
Protein Sequence

Gene family

Gene familysubfamily
Transcription Factors FamilyGRAS

KEGG pathway

KO Enzyme pathway mapID
--------

Gene Ontology

GO term OntologyName

Expression pattern


Expression pattern detail

SRPSampleDescriptionTPM
SRP075780SRR3591705youngest leaf0.533
SRR3591706second leaf2.000
SRR3591707mature leaf1.789
SRR3591708Shoot apex1.895
SRR3591709Stem0.154
SRR3591710White floral bud0.087
SRR3591711White flower0.040
SRR3591712Green floral bud0.232
SRR3591713Yellow flower0.037
SRP173429 SRR8316895Juvenile bud stage 0.058
SRR8316896Juvenile bud stage 0.252
SRR8316897Juvenile bud stage 0.100
SRR8316894Third green stage 0.149
SRR8316900Third green stage 0.165
SRR8316901Third green stage 0.150
SRR8316898Complete white stage 0.000
SRR8316899Complete white stage 0.095
SRR8316903Complete white stage 0.008
SRR8316902Silver flowering stage0.000
SRR8316904Silver flowering stage0.000
SRR8316905Silver flowering stage0.034
SRR8316906Gold flowering stage 0.022
SRR8316907Gold flowering stage 0.075
SRR8316908Gold flowering stage 0.176
SRP132670SRR6706286Control0.105
SRR6706287Light intensity 50%0.137
SRR6706288Light intensity 20%0.144
CNP0000432CNS0095592Slightly white alabastrum(diploid) 10.087
CNS0095593Slightly white alabastrum(diploid) 20.051
CNS0095594Slightly white alabastrum(diploid) 30.020
CNS0095595Whole white alabastrum(diploid) 20.060
CNS0095596Whole white alabastrum(diploid) 30.180
CNS0095597Whole white alabastrum(diploid) 40.000
CNS0095598Silvery flower (diploied) 10.027
CNS0095599Silvery flower (diploied) 20.000
CNS0095600Silvery flower (diploied) 30.080
CNS0095601Golden flower (diploid) 10.077
CNS0095602Golden flower (diploid) 20.018
CNS0095603Golden flower (diploid) 30.098
CNS0095604Slightly white alabastrum(tetraploid) 10.228
CNS0095605Slightly white alabastrum(tetraploid) 20.027
CNS0095606Slightly white alabastrum(tetraploid) 30.063
CNS0095607Whole white alabastrum(tetraploid) 10.000
CNS0095608Whole white alabastrum(tetraploid) 20.004
CNS0095609Whole white alabastrum(tetraploid) 30.087
CNS0095610Silvery flower (tetraploid) 10.000
CNS0095611Silvery flower (tetraploid) 20.055
CNS0095612Silvery flower (tetraploid) 30.000
CNS0095613Golden flower (tetraploid) 10.016
CNS0095614Golden flower (tetraploid) 20.009
CNS0095615Golden flower (tetraploid) 30.000
CRA001975CRR073297Stem 10.313
CRR073298Stem 20.155
CRR073299Stem 30.275
CRR073300Leaf 10.175
CRR073301Leaf 20.128
CRR073302Leaf 30.040
CRR073303Juvenile bud 10.080
CRR073304Juvenile bud 20.117
CRR073305Juvenile bud 30.140
CRR073306Third green 10.000
CRR073307Third green 20.001
CRR073308Third green 30.000
CRR073309Second white 10.000
CRR073310Second white 20.000
CRR073311Second white 30.000
CRR073312Silver flowering 10.000
CRR073313Silver flowering 20.000
CRR073314Silver flowering 30.000
CRR073315Gold flowering 12.254
CRR073316Gold flowering 21.524
CRR073317Gold flowering 32.805
CRR073318Tawny withering 10.030
CRR073319Tawny withering 20.255
CRR073320Tawny withering 30.000