Gene detail

Detail information of GWHGAAZE025368

Functional Annotation

Database	Orthologs	E value	Annotation
Nr	XP_007031656.1	0	Cytochrome P450 724B1 [Theobroma cacao]
COG	YP_007055574.1	3E-50	cytochrome P450
Swissprot	tr\|Q6F4F5\|C724B_ORYSJ	2E-167	Cytochrome P450 724B1
trEMBL	tr\|A0A061EDU3\|A0A061EDU3_THECC	0	Cytochrome P450 724B1 {ECO:0000313\|EMBL:EOY02582.1}
TAIR10	AT5G14400.1	2E-109	cytochrome P450, family 724, subfamily A, polypeptide 1

Location And Transcript Sequence (JBrowse)

Scaffold	Type	Start	End	Strand
GWHAAZE00000007	gene	60273776	60276435	-
GWHAAZE00000007	mRNA	60273776	60276435	-
GWHAAZE00000007	exon	60273776	60273898	-
GWHAAZE00000007	exon	60274046	60274152	-
GWHAAZE00000007	exon	60274590	60274668	-
GWHAAZE00000007	exon	60274808	60274894	-
GWHAAZE00000007	exon	60275039	60275248	-
GWHAAZE00000007	exon	60275397	60275549	-
GWHAAZE00000007	exon	60275744	60276068	-
GWHAAZE00000007	exon	60276224	60276435	-
GWHAAZE00000007	CDS	60276224	60276435	-
GWHAAZE00000007	CDS	60275744	60276068	-
GWHAAZE00000007	CDS	60275397	60275549	-
GWHAAZE00000007	CDS	60275039	60275248	-
GWHAAZE00000007	CDS	60274808	60274894	-
GWHAAZE00000007	CDS	60274590	60274668	-
GWHAAZE00000007	CDS	60274046	60274152	-
GWHAAZE00000007	CDS	60273776	60273898	-

Transcript Sequence
>GWHTAAZE025402 ATGTTAGCTCTTTCGTCAGTGACATTGTCACTTCTGCTAGGACTACTAGCGCTCGTTTTCCTTCTCTCACACTACTTGTTTTTCAAAAAAGAAGACCCCAAAGACGTACCCAATGGGACCATGGGTTGGCCCTTTCTTGGGGAGACTCTTGGCTACCTCAAGCCTCACAAATCAAACTCCATGGGCAGCTTCTTACAAGAACATTGCTCTAGATACGGGCGTGTTTTTAAGTCACATTTGTTTGGATCTCCAACTGTGGTTTCTTGTGATCTTGAGCTAAATACATTCATTCTTCAAAATGAAGAGAAGTTGTTCCAAAGTAGCTACCCGAAGCAGGTCCACGACATTCTTGGGAAGCTTTCATTGATGCTTGTGTCTGGTGATCTTCATAGAAAGCTCAGAAATGTCGCTCTAAGCTTTACCACAACATCCAAGTCAAGGCCGGACTTCCTTCATTATGTAGAAAAGTTGTCGATTTCTGTGATGAAATCATGGAAAGATCGTCGTCAAGTTCTCTTCTTTAAAGAAGCTAAAGAGTTTACGTTATATCTCATGTTGAAGAATCTGCTAAATATCGAGCCGAATGAGCCGCAAGCTTTAAAAATACTAGAAGACTTCCTTACCTTCATGAAAGGGTTTGTGTCTCTCCCATTGTATGTTCCAGGAACCCCATATGCTAAGGCTGTCAAGGAGATTATAGAAGAAAGGGAAAGGGAGAGTGTAGGGCTGTCAAAAGGGGACTTTTTAGATGAAGTTTTGCTGAAAGGGAACTTAAATATTGAAGAGAAAGTTAGTATTTTGATGGACCTTCTGCTAGCAGGTTATGAAACAACCTCAGGGCTACTGGCCCTAGTAGTCTACTTTCTTGGACAGGCACCATATTTTCTTGAAAAACTAAAGGAAGAACACCTGGCTCTGAGGAGAGGCAAAAAGGATGGACAACCCTTGAATTGGGAAGATTACAAGCAAATGGAATTCACCTCCAATGTCATATCTGAAGCTCTGAGGTGCGGGAATCTAGTTAAGTTTGTGCACAGGAGAGCCCTTCAAGATGTCAAGTTTAAAGGATATCTCATTCCTGCAGGATGGCAAGTTCTTCCAATCTTCACAGCAGCACATCTTGATCCATCTCTTCATGAAAATCCCTTAGAGTTCAATCCTTGGAGATGGGATGATCAAGCAGTGAAAAAAAAAGTGACACCTTTTGGTGGTGGATTGCGGCTATGTCCGGGGGCAGACCTTGCTAAAGTGGAGACTGCTTTCTTCCTTCATCATCTTGTCCTTAATTATAGGTAA

Network for GWHGAAZE025368

Network category	Network	Top300 PCC genelist
Coexpression Positive	Network	Top300 PCC genelist
Coexpression Negative	Network	Top300 PCC genelist

Functional Module

Module ID	Function Annotation

Protein Structure

Pfam accession	Pfam name	Alignment start	Alignment end	E-value
PF00067.23	p450	37	431	2.80E-51

Protein Sequence

Gene family

Gene family	subfamily
--	--

KEGG pathway

KO	Enzyme	pathway	mapID
K12639	CYP724B1, D11	Metabolic pathways	map01100
		Biosynthesis of secondary metabolites	map01110
		Brassinosteroid biosynthesis	map00905

Gene Ontology

GO term	Ontology	Name
GO:0055114	biological_process	oxidation-reduction process
GO:0005506	molecular_function	iron ion binding
GO:0016705	molecular_function	oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen
GO:0020037	molecular_function	heme binding

Expression pattern

Expression pattern detail

SRP	Sample	Description	TPM
SRP075780	SRR3591705	youngest leaf	0.254
	SRR3591706	second leaf	0.032
	SRR3591707	mature leaf	0.000
	SRR3591708	Shoot apex	0.958
	SRR3591709	Stem	0.000
	SRR3591710	White floral bud	0.000
	SRR3591711	White flower	0.244
	SRR3591712	Green floral bud	0.000
	SRR3591713	Yellow flower	0.115
SRP173429	SRR8316895	Juvenile bud stage	0.034
	SRR8316896	Juvenile bud stage	0.000
	SRR8316897	Juvenile bud stage	0.000
	SRR8316894	Third green stage	0.051
	SRR8316900	Third green stage	0.000
	SRR8316901	Third green stage	0.000
	SRR8316898	Complete white stage	0.000
	SRR8316899	Complete white stage	0.227
	SRR8316903	Complete white stage	0.000
	SRR8316902	Silver flowering stage	0.139
	SRR8316904	Silver flowering stage	0.000
	SRR8316905	Silver flowering stage	0.029
	SRR8316906	Gold flowering stage	0.000
	SRR8316907	Gold flowering stage	0.000
	SRR8316908	Gold flowering stage	1.355
SRP132670	SRR6706286	Control	0.020
	SRR6706287	Light intensity 50%	0.038
	SRR6706288	Light intensity 20%	0.021
CNP0000432	CNS0095592	Slightly white alabastrum(diploid) 1	0.000
	CNS0095593	Slightly white alabastrum(diploid) 2	0.000
	CNS0095594	Slightly white alabastrum(diploid) 3	0.000
	CNS0095595	Whole white alabastrum(diploid) 2	0.035
	CNS0095596	Whole white alabastrum(diploid) 3	0.000
	CNS0095597	Whole white alabastrum(diploid) 4	0.043
	CNS0095598	Silvery flower (diploied) 1	0.243
	CNS0095599	Silvery flower (diploied) 2	0.290
	CNS0095600	Silvery flower (diploied) 3	0.004
	CNS0095601	Golden flower (diploid) 1	0.222
	CNS0095602	Golden flower (diploid) 2	0.000
	CNS0095603	Golden flower (diploid) 3	0.094
	CNS0095604	Slightly white alabastrum(tetraploid) 1	0.137
	CNS0095605	Slightly white alabastrum(tetraploid) 2	0.000
	CNS0095606	Slightly white alabastrum(tetraploid) 3	0.585
	CNS0095607	Whole white alabastrum(tetraploid) 1	0.196
	CNS0095608	Whole white alabastrum(tetraploid) 2	0.000
	CNS0095609	Whole white alabastrum(tetraploid) 3	0.000
	CNS0095610	Silvery flower (tetraploid) 1	0.037
	CNS0095611	Silvery flower (tetraploid) 2	0.028
	CNS0095612	Silvery flower (tetraploid) 3	0.117
	CNS0095613	Golden flower (tetraploid) 1	0.000
	CNS0095614	Golden flower (tetraploid) 2	0.042
	CNS0095615	Golden flower (tetraploid) 3	0.000
CRA001975	CRR073297	Stem 1	0.217
	CRR073298	Stem 2	0.080
	CRR073299	Stem 3	0.231
	CRR073300	Leaf 1	0.000
	CRR073301	Leaf 2	0.000
	CRR073302	Leaf 3	0.000
	CRR073303	Juvenile bud 1	0.000
	CRR073304	Juvenile bud 2	0.000
	CRR073305	Juvenile bud 3	0.000
	CRR073306	Third green 1	0.000
	CRR073307	Third green 2	0.000
	CRR073308	Third green 3	0.000
	CRR073309	Second white 1	0.000
	CRR073310	Second white 2	0.000
	CRR073311	Second white 3	0.000
	CRR073312	Silver flowering 1	0.439
	CRR073313	Silver flowering 2	0.000
	CRR073314	Silver flowering 3	0.000
	CRR073315	Gold flowering 1	0.000
	CRR073316	Gold flowering 2	0.000
	CRR073317	Gold flowering 3	0.000
	CRR073318	Tawny withering 1	0.672
	CRR073319	Tawny withering 2	0.124
	CRR073320	Tawny withering 3	0.209