Gene detail

Detail information of GWHGAAZE025192

Functional Annotation

Database	Orthologs	E value	Annotation
Nr	XP_006439128.1	0	hypothetical protein CICLE_v10033595mg [Citrus clementina]
Swissprot	tr\|P25083\|ADT1_SOLTU	0	ADP,ATP carrier protein, mitochondrial (Precursor)
trEMBL	tr\|V4SWS2\|V4SWS2_9ROSI	0	Uncharacterized protein {ECO:0000313\|EMBL:ESR52368.1}
TAIR10	AT5G13490.2	6E-174	ADP/ATP carrier 2

Location And Transcript Sequence (JBrowse)

Scaffold	Type	Start	End	Strand
GWHAAZE00000007	gene	56993629	56996623	+
GWHAAZE00000007	mRNA	56993629	56996623	+
GWHAAZE00000007	exon	56993629	56994141	+
GWHAAZE00000007	exon	56994454	56994825	+
GWHAAZE00000007	exon	56996327	56996623	+
GWHAAZE00000007	CDS	56993629	56994141	+
GWHAAZE00000007	CDS	56994454	56994825	+
GWHAAZE00000007	CDS	56996327	56996623	+

Transcript Sequence
>GWHTAAZE025226 GAAAACATGATGATTGATCAAACACAGCACCCCACTATCGCCCAGAAGGTAGCCGGCAACCTCCTCCTCAAATCTTGCCCATCCCAAAATCTTCAAACTTACGAGAATGATTTCCCCTCTCTGTACCAAAGGCAATTCAAATATGGGAACTACGCCAAACCCGCATTCCAAAATCCCATTTCTCATCAATGCCGAGCCACACAAGATCTATCGATGTTTCAATCAACTGTATCTCCTGTTTTCGTCCAAGCACCTGCGGAGAAAGGCTTTGCCGGTTTTGCCATTGATTTTCTTATGGGCGGAGTCTCTGCAGCCGTGTCCAAAACGGCTGCTGCTCCGATTGAGCGCGTGAAGCTCTTGATCCAGAACCAGGATGAGATGATCAAAGCCGGTAGGTTGTCTGAGCCGTACAAGGGGATTGGTGAGTGTTTTAGCAGGACGATGAAGGAGGAAGGCATTATTTCGTTGTGGAGAGGGAACACTGCTAATGTTATTCGTTACTTCCCAACTCAGGCGTTGAACTTTGCATTTAAGGATTACTTTAAGAGGCTTTTCAACTTCAAGAAAGACAGAGACGGTTACTGGAAATGGTTTGCCGGAAACTTGGCATCTGGTGGTATGGCCGGTGCTTCTTCCCTTCTCTTTGTGTATTCCCTCGACTACGCTAGGACCCGTTTGGCAAATGATGCTAAGGCGGCAAAGACTGGAGGAGAGAGGCAATTTAATGGCCTTGTCGATGTGTACAAGAAGACATTAGCTTCTGATGGTGTTGCTGGCCTTTACCGCGGTTTCAATATTTCTTGTGTTGGAATCATTGTTTATCGTGGTCTCTACTTTGGATTGTATGATTCAGTGAAGCCCGTCATCCTCACAGGAAAGCTGCAGGATAGTTTCTTCGCTAGTTTTGCCCTCGGTTGGGTCATAACCAATGGGGCCGGGCTTGCCTCGTACCCGATCGACACGGTCCGGAGAAGGATGATGATGACCTCCGGTGAAGCTGTAAAGTACAGGAGCTCAATGCACGCTTTCTCTGAAATCCTAAAGAACGAAGGTGCCAAGTCTCTCTTCAAGGGTGCTGGAGCAAATATTCTCCGGGCAATCGCCGGTGCTGGAGTTCTCGCCGGTTACGACAAGCTCCAGGTGCTCGTTTTGGGGAAGAAGTATGGGTCAGGTGGCGCTTAA

Network for GWHGAAZE025192

Network category	Network	Top300 PCC genelist
Coexpression Positive	Network	Top300 PCC genelist
Coexpression Negative	Network	Top300 PCC genelist

Functional Module

Module ID	Function Annotation

Protein Structure

Pfam accession	Pfam name	Alignment start	Alignment end	E-value
PF00153.28	Mito_carr	93	188	8.00E-23
PF00153.28	Mito_carr	195	290	2.40E-23
PF00153.28	Mito_carr	297	383	6.10E-16

Protein Sequence

Gene family

Gene family	subfamily
--	--

KEGG pathway

KO	Enzyme	pathway	mapID
K05863	SLC25A4S, ANT	Calcium signaling pathway	map04020
		cGMP-PKG signaling pathway	map04022
		Necroptosis	map04217
		Cellular senescence	map04218

Gene Ontology

GO term	Ontology	Name
GO:0055085	biological_process	transmembrane transport
GO:0005743	cellular_component	mitochondrial inner membrane
GO:0022857	molecular_function	transmembrane transporter activity

Expression pattern

Expression pattern detail

SRP	Sample	Description	TPM
SRP075780	SRR3591705	youngest leaf	0.102
	SRR3591706	second leaf	3.455
	SRR3591707	mature leaf	14.905
	SRR3591708	Shoot apex	0.159
	SRR3591709	Stem	1.064
	SRR3591710	White floral bud	38.726
	SRR3591711	White flower	0.377
	SRR3591712	Green floral bud	274.909
	SRR3591713	Yellow flower	0.000
SRP173429	SRR8316895	Juvenile bud stage	86.543
	SRR8316896	Juvenile bud stage	210.873
	SRR8316897	Juvenile bud stage	91.624
	SRR8316894	Third green stage	70.360
	SRR8316900	Third green stage	317.642
	SRR8316901	Third green stage	338.645
	SRR8316898	Complete white stage	0.703
	SRR8316899	Complete white stage	3.145
	SRR8316903	Complete white stage	1.065
	SRR8316902	Silver flowering stage	1.651
	SRR8316904	Silver flowering stage	2.135
	SRR8316905	Silver flowering stage	0.583
	SRR8316906	Gold flowering stage	0.535
	SRR8316907	Gold flowering stage	0.119
	SRR8316908	Gold flowering stage	0.209
SRP132670	SRR6706286	Control	154.257
	SRR6706287	Light intensity 50%	150.795
	SRR6706288	Light intensity 20%	133.266
CNP0000432	CNS0095592	Slightly white alabastrum(diploid) 1	156.413
	CNS0095593	Slightly white alabastrum(diploid) 2	97.273
	CNS0095594	Slightly white alabastrum(diploid) 3	186.961
	CNS0095595	Whole white alabastrum(diploid) 2	177.249
	CNS0095596	Whole white alabastrum(diploid) 3	247.138
	CNS0095597	Whole white alabastrum(diploid) 4	176.499
	CNS0095598	Silvery flower (diploied) 1	2.757
	CNS0095599	Silvery flower (diploied) 2	13.239
	CNS0095600	Silvery flower (diploied) 3	2.974
	CNS0095601	Golden flower (diploid) 1	2.548
	CNS0095602	Golden flower (diploid) 2	2.010
	CNS0095603	Golden flower (diploid) 3	1.014
	CNS0095604	Slightly white alabastrum(tetraploid) 1	292.566
	CNS0095605	Slightly white alabastrum(tetraploid) 2	245.858
	CNS0095606	Slightly white alabastrum(tetraploid) 3	0.432
	CNS0095607	Whole white alabastrum(tetraploid) 1	372.469
	CNS0095608	Whole white alabastrum(tetraploid) 2	509.213
	CNS0095609	Whole white alabastrum(tetraploid) 3	399.914
	CNS0095610	Silvery flower (tetraploid) 1	0.999
	CNS0095611	Silvery flower (tetraploid) 2	4.876
	CNS0095612	Silvery flower (tetraploid) 3	21.822
	CNS0095613	Golden flower (tetraploid) 1	0.923
	CNS0095614	Golden flower (tetraploid) 2	0.873
	CNS0095615	Golden flower (tetraploid) 3	6.681
CRA001975	CRR073297	Stem 1	79.217
	CRR073298	Stem 2	73.120
	CRR073299	Stem 3	63.436
	CRR073300	Leaf 1	113.370
	CRR073301	Leaf 2	120.173
	CRR073302	Leaf 3	97.819
	CRR073303	Juvenile bud 1	132.770
	CRR073304	Juvenile bud 2	182.956
	CRR073305	Juvenile bud 3	10.289
	CRR073306	Third green 1	43.420
	CRR073307	Third green 2	64.688
	CRR073308	Third green 3	42.347
	CRR073309	Second white 1	4.636
	CRR073310	Second white 2	5.318
	CRR073311	Second white 3	9.154
	CRR073312	Silver flowering 1	41.316
	CRR073313	Silver flowering 2	62.062
	CRR073314	Silver flowering 3	20.137
	CRR073315	Gold flowering 1	44.204
	CRR073316	Gold flowering 2	9.963
	CRR073317	Gold flowering 3	33.848
	CRR073318	Tawny withering 1	27.374
	CRR073319	Tawny withering 2	32.920
	CRR073320	Tawny withering 3	31.538