Detail information of GWHGAAZE024998


Functional Annotation

DatabaseOrthologsE valueAnnotation
NrXP_009785335.15.85809E-61PREDICTED: uncharacterized protein LOC104233609 [Nicotiana sylvestris]
Swissprottr|P32295|ARG7_VIGRR6E-16Indole-3-acetic acid-induced protein ARG7
trEMBLtr|W9R2M9|W9R2M9_9ROSA2E-60Uncharacterized protein {ECO:0000313|EMBL:EXB37077.1}
TAIR10AT3G60690.12E-35SAUR-like auxin-responsive protein family

Location And Transcript Sequence (JBrowse)

ScaffoldTypeStartEndStrand
GWHAAZE00000007gene5321772753218221-
GWHAAZE00000007mRNA5321772753218221-
GWHAAZE00000007exon5321772753218221-
GWHAAZE00000007CDS5321772753218221-
Transcript Sequence

Network for GWHGAAZE024998

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist


Functional Module

Module IDFunction Annotation


Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF02519.15Auxin_inducible831485.30E-19
Protein Sequence

Gene family

Gene familysubfamily
----

KEGG pathway

KO Enzyme pathway mapID
K14488SAUR Plant hormone signal transduction map04075

Gene Ontology

GO term OntologyName
GO:0009733biological_processresponse to auxin

Expression pattern


Expression pattern detail

SRPSampleDescriptionTPM
SRP075780SRR3591705youngest leaf4.762
SRR3591706second leaf23.559
SRR3591707mature leaf164.255
SRR3591708Shoot apex4.511
SRR3591709Stem27.230
SRR3591710White floral bud33.915
SRR3591711White flower74.995
SRR3591712Green floral bud13.598
SRR3591713Yellow flower88.474
SRP173429 SRR8316895Juvenile bud stage 3.571
SRR8316896Juvenile bud stage 6.602
SRR8316897Juvenile bud stage 2.220
SRR8316894Third green stage 1.752
SRR8316900Third green stage 4.391
SRR8316901Third green stage 8.247
SRR8316898Complete white stage 5.273
SRR8316899Complete white stage 7.410
SRR8316903Complete white stage 8.855
SRR8316902Silver flowering stage10.759
SRR8316904Silver flowering stage11.349
SRR8316905Silver flowering stage7.647
SRR8316906Gold flowering stage 38.804
SRR8316907Gold flowering stage 29.053
SRR8316908Gold flowering stage 40.367
SRP132670SRR6706286Control4.594
SRR6706287Light intensity 50%4.340
SRR6706288Light intensity 20%3.684
CNP0000432CNS0095592Slightly white alabastrum(diploid) 110.805
CNS0095593Slightly white alabastrum(diploid) 26.627
CNS0095594Slightly white alabastrum(diploid) 38.946
CNS0095595Whole white alabastrum(diploid) 25.552
CNS0095596Whole white alabastrum(diploid) 34.219
CNS0095597Whole white alabastrum(diploid) 45.622
CNS0095598Silvery flower (diploied) 129.853
CNS0095599Silvery flower (diploied) 229.061
CNS0095600Silvery flower (diploied) 332.830
CNS0095601Golden flower (diploid) 147.454
CNS0095602Golden flower (diploid) 274.558
CNS0095603Golden flower (diploid) 362.121
CNS0095604Slightly white alabastrum(tetraploid) 13.386
CNS0095605Slightly white alabastrum(tetraploid) 22.522
CNS0095606Slightly white alabastrum(tetraploid) 32.578
CNS0095607Whole white alabastrum(tetraploid) 15.402
CNS0095608Whole white alabastrum(tetraploid) 21.544
CNS0095609Whole white alabastrum(tetraploid) 33.213
CNS0095610Silvery flower (tetraploid) 127.760
CNS0095611Silvery flower (tetraploid) 225.651
CNS0095612Silvery flower (tetraploid) 34.908
CNS0095613Golden flower (tetraploid) 148.801
CNS0095614Golden flower (tetraploid) 253.222
CNS0095615Golden flower (tetraploid) 354.129
CRA001975CRR073297Stem 14.819
CRR073298Stem 25.028
CRR073299Stem 36.541
CRR073300Leaf 18.024
CRR073301Leaf 27.414
CRR073302Leaf 310.776
CRR073303Juvenile bud 17.889
CRR073304Juvenile bud 29.426
CRR073305Juvenile bud 37.722
CRR073306Third green 11.034
CRR073307Third green 22.419
CRR073308Third green 31.946
CRR073309Second white 11.682
CRR073310Second white 25.642
CRR073311Second white 32.158
CRR073312Silver flowering 17.631
CRR073313Silver flowering 28.913
CRR073314Silver flowering 311.877
CRR073315Gold flowering 132.796
CRR073316Gold flowering 234.782
CRR073317Gold flowering 338.937
CRR073318Tawny withering 1111.138
CRR073319Tawny withering 245.657
CRR073320Tawny withering 359.748