Detail information of GWHGAAZE024988


Functional Annotation

DatabaseOrthologsE valueAnnotation
NrAGH33875.10transketolase [Camellia sinensis]
COGYP_007110498.10transketolase
Swissprottr|Q43848|TKTC_SOLTU0Transketolase, chloroplastic (Precursor)
trEMBLtr|M4QSX4|M4QSX4_CAMSI0Transketolase {ECO:0000313|EMBL:AGH33875.1}
TAIR10AT3G60750.10Transketolase

Location And Transcript Sequence (JBrowse)

ScaffoldTypeStartEndStrand
GWHAAZE00000007gene5308602553090393-
GWHAAZE00000007mRNA5308602553090393-
GWHAAZE00000007exon5308602553086320-
GWHAAZE00000007exon5308640153086980-
GWHAAZE00000007exon5308739253087545-
GWHAAZE00000007exon5308788453088032-
GWHAAZE00000007exon5308831653088598-
GWHAAZE00000007exon5308867953088784-
GWHAAZE00000007exon5308888253088972-
GWHAAZE00000007exon5308989953090393-
GWHAAZE00000007CDS5308989953090393-
GWHAAZE00000007CDS5308888253088972-
GWHAAZE00000007CDS5308867953088784-
GWHAAZE00000007CDS5308831653088598-
GWHAAZE00000007CDS5308788453088032-
GWHAAZE00000007CDS5308739253087545-
GWHAAZE00000007CDS5308640153086980-
GWHAAZE00000007CDS5308602553086320-
Transcript Sequence

Network for GWHGAAZE024988

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist


Functional Module

Module IDFunction Annotation


Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF00456.22Transketolase_N874181.20E-152
PF02779.25Transket_pyr4366064.80E-45
Protein Sequence

Gene family

Gene familysubfamily
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KEGG pathway

KO Enzyme pathway mapID
K00615E2.2.1.1, tktA, tktB Metabolic pathways map01100
Biosynthesis of secondary metabolitesmap01110
Microbial metabolism in diverse environmentsmap01120
Carbon metabolismmap01200
Biosynthesis of amino acidsmap01230
Pentose phosphate pathwaymap00030
Carbon fixation in photosynthetic organismsmap00710
Biosynthesis of ansamycinsmap01051

Gene Ontology

GO term OntologyName
GO:0003824molecular_functioncatalytic activity
GO:0004802molecular_functiontransketolase activity

Expression pattern


Expression pattern detail

SRPSampleDescriptionTPM
SRP075780SRR3591705youngest leaf287.838
SRR3591706second leaf695.952
SRR3591707mature leaf772.932
SRR3591708Shoot apex326.365
SRR3591709Stem210.287
SRR3591710White floral bud281.278
SRR3591711White flower267.248
SRR3591712Green floral bud279.551
SRR3591713Yellow flower184.196
SRP173429 SRR8316895Juvenile bud stage 197.869
SRR8316896Juvenile bud stage 219.593
SRR8316897Juvenile bud stage 137.426
SRR8316894Third green stage 103.374
SRR8316900Third green stage 326.408
SRR8316901Third green stage 272.137
SRR8316898Complete white stage 73.040
SRR8316899Complete white stage 239.672
SRR8316903Complete white stage 168.383
SRR8316902Silver flowering stage125.953
SRR8316904Silver flowering stage170.626
SRR8316905Silver flowering stage103.435
SRR8316906Gold flowering stage 228.517
SRR8316907Gold flowering stage 339.367
SRR8316908Gold flowering stage 348.233
SRP132670SRR6706286Control346.425
SRR6706287Light intensity 50%326.862
SRR6706288Light intensity 20%327.751
CNP0000432CNS0095592Slightly white alabastrum(diploid) 1177.094
CNS0095593Slightly white alabastrum(diploid) 2159.794
CNS0095594Slightly white alabastrum(diploid) 3152.450
CNS0095595Whole white alabastrum(diploid) 2162.099
CNS0095596Whole white alabastrum(diploid) 3173.488
CNS0095597Whole white alabastrum(diploid) 4146.216
CNS0095598Silvery flower (diploied) 1325.707
CNS0095599Silvery flower (diploied) 2297.520
CNS0095600Silvery flower (diploied) 3411.755
CNS0095601Golden flower (diploid) 1229.178
CNS0095602Golden flower (diploid) 2393.740
CNS0095603Golden flower (diploid) 3370.141
CNS0095604Slightly white alabastrum(tetraploid) 1234.791
CNS0095605Slightly white alabastrum(tetraploid) 2220.583
CNS0095606Slightly white alabastrum(tetraploid) 3433.510
CNS0095607Whole white alabastrum(tetraploid) 1115.404
CNS0095608Whole white alabastrum(tetraploid) 2111.828
CNS0095609Whole white alabastrum(tetraploid) 3419.587
CNS0095610Silvery flower (tetraploid) 1423.446
CNS0095611Silvery flower (tetraploid) 2552.285
CNS0095612Silvery flower (tetraploid) 3312.463
CNS0095613Golden flower (tetraploid) 1172.235
CNS0095614Golden flower (tetraploid) 2390.856
CNS0095615Golden flower (tetraploid) 3154.426
CRA001975CRR073297Stem 1371.786
CRR073298Stem 2328.072
CRR073299Stem 3423.300
CRR073300Leaf 1300.101
CRR073301Leaf 2324.674
CRR073302Leaf 3257.937
CRR073303Juvenile bud 1340.693
CRR073304Juvenile bud 2282.412
CRR073305Juvenile bud 3447.599
CRR073306Third green 1221.182
CRR073307Third green 2130.661
CRR073308Third green 3169.799
CRR073309Second white 1275.420
CRR073310Second white 2170.673
CRR073311Second white 3204.988
CRR073312Silver flowering 1173.016
CRR073313Silver flowering 2185.584
CRR073314Silver flowering 3178.080
CRR073315Gold flowering 1536.994
CRR073316Gold flowering 2827.674
CRR073317Gold flowering 3955.680
CRR073318Tawny withering 1208.062
CRR073319Tawny withering 2146.985
CRR073320Tawny withering 3218.147