Gene detail

Detail information of GWHGAAZE024791

Functional Annotation

Database	Orthologs	E value	Annotation
Nr	EYU32292.1	0	hypothetical protein MIMGU_mgv1a007185mg [Erythranthe guttata]
COG	YP_003957379.1	1E-24	Ser/Thr protein kinase
Swissprot	tr\|Q9MAM1\|CIPK9_ARATH	0	CBL-interacting serine/threonine-protein kinase 9
trEMBL	tr\|A0A022QUD0\|A0A022QUD0_ERYGU	0	Uncharacterized protein {ECO:0000313\|EMBL:EYU32292.1}
TAIR10	AT1G01140.3	1E-179	CBL-interacting protein kinase 9

Location And Transcript Sequence (JBrowse)

Scaffold	Type	Start	End	Strand
GWHAAZE00000007	gene	49498847	49505075	-
GWHAAZE00000007	mRNA	49498847	49505075	-
GWHAAZE00000007	exon	49504772	49505075	-
GWHAAZE00000007	exon	49503870	49503932	-
GWHAAZE00000007	exon	49503012	49503119	-
GWHAAZE00000007	exon	49502854	49502934	-
GWHAAZE00000007	exon	49501307	49501360	-
GWHAAZE00000007	exon	49501079	49501204	-
GWHAAZE00000007	exon	49500875	49500964	-
GWHAAZE00000007	exon	49500601	49500723	-
GWHAAZE00000007	exon	49500323	49500430	-
GWHAAZE00000007	exon	49499992	49500108	-
GWHAAZE00000007	exon	49499731	49499787	-
GWHAAZE00000007	exon	49498847	49498951	-
GWHAAZE00000007	five_prime_UTR	49504970	49505075	-
GWHAAZE00000007	CDS	49504772	49504969	-
GWHAAZE00000007	CDS	49503870	49503932	-
GWHAAZE00000007	CDS	49503012	49503119	-
GWHAAZE00000007	CDS	49502854	49502934	-
GWHAAZE00000007	CDS	49501307	49501360	-
GWHAAZE00000007	CDS	49501079	49501204	-
GWHAAZE00000007	CDS	49500875	49500964	-
GWHAAZE00000007	CDS	49500601	49500723	-
GWHAAZE00000007	CDS	49500323	49500430	-
GWHAAZE00000007	CDS	49499992	49500108	-
GWHAAZE00000007	CDS	49499731	49499787	-
GWHAAZE00000007	CDS	49498847	49498951	-

Transcript Sequence
>GWHTAAZE024825 ACGTGCTTAATTGTTATAGATAGATAGATGAGATCGGAAATATATAGTACGTGCTGAGAAAGAAAGAAAGAGAAGGAATTGATCGACCGATCGAGAGAGAGAGAGAATGAGCGTTCATGTAACGGCTCCTCCTCCTCCTCCTCCGGGGACCAGAACTCGTGTGGGGAAATACGAGATAGGGAGGACACTTGGAGAAGGAAGTTTCGCAAAGGTCAAGTACGCTAGGAATGTGGATAACGGTGACAGCGTCGCCATCAAAATCATTGACCGTGATTATGTCCTCCGTCACAAAATGGTCGATCCTATTAAAAGAGAAATATCAACAATGAAGTTGATCAAACATCCAAATGTTCTTAATATTGTTGAGGCCAGAAATGGCAGACTTAAAGAAGATGAAGCTAGGAGATATTTTCAGCAGCTCATTAATGCTGTGGATTACTGCCACAGTAGAGGCGTGTACCACCGTGACTTGAAGCCTGAGAATCTGCTCCTGGACTCGTATGGCGTTCTTAAAGTTTCAGACTTTGGATTGAGTGCATTTTCACAGCAAGTACGGGAAGATGGGCTTCTTCATACTGCCTGTGGGACCCCAAATTATGTTGCTCCTGAGGTGCTAATGGACAAAGGTTATGATGGTACATCAGCTGATGTATGGTCTTGTGGTGTCATTCTATTCGTGCTTATGGCTGGATACTTGCCTTTTGATGAACCGAGCCTCATTGCTTTGTATAGGAGAATTCAGAAGGCTGATTTCACATTTCCACCATGGTTCTCATCTGGTGCAAAGAACTTCATTAAGTGCATTCTTGACCCAAATCCGCTCACTCGGATGACAATTCCAAAAATCTTAGAAAGTGATTGGTTCAGAAAAGATTACAAGCCTCCCCATTTTGAGCAGGGAGATGATGTTAGTCTTGACGATGTAGATGCTGTTTTTACTGACTCAGCAGAGCATTTTGTTACAGAAAAGAAAGAGAGACCTGTATCCATGAATGCGTTTGAGCTTATTTCTAGATCACAGGGTTTCAGTCTTGAAAATTTGTTTGGAAAGCAGATGGGTCTTGTTAAGAGAGAAACACGTTTTACTTCCAAGTGCCCTCCCAATGAGATTATGTCCAAACTCGAGGAAGCTGCAAAGCCTTTAGGTTTCAATGTTCACAAGAGAAACTATAAGATGAAGTTGCAAGGTGACAAGACTGGAAGGAAGGGCCACCTTGCAGTTGCTACAGAGGTATTTGAGGTGGCTCCCTCAGTGCATATGGTGGAGCTCCGAAAAACAGGTGGCGACACTCTAGAGTTTCACAAGGCATGTCTTCACACTTTAATCTTTAATTGA

Network for GWHGAAZE024791

Network category	Network	Top300 PCC genelist
Coexpression Positive	Network	Top300 PCC genelist
Coexpression Negative	Network	Top300 PCC genelist

Functional Module

Module ID	Function Annotation

Protein Structure

Pfam accession	Pfam name	Alignment start	Alignment end	E-value
PF00069.26	Pkinase	22	88	2.50E-09
PF00069.26	Pkinase	89	253	8.10E-45
PF03822.15	NAF	292	352	1.20E-22

Protein Sequence

Gene family

Gene family	subfamily
Protein Kinases Family	CAMK_CAMKL-CHK1

KEGG pathway

KO	Enzyme	pathway	mapID
--	--	--	--

Gene Ontology

GO term	Ontology	Name
GO:0006468	biological_process	protein phosphorylation
GO:0007165	biological_process	signal transduction
GO:0004672	molecular_function	protein kinase activity
GO:0005524	molecular_function	ATP binding

Expression pattern

Expression pattern detail

SRP	Sample	Description	TPM
SRP075780	SRR3591705	youngest leaf	87.439
	SRR3591706	second leaf	43.137
	SRR3591707	mature leaf	63.054
	SRR3591708	Shoot apex	59.426
	SRR3591709	Stem	31.202
	SRR3591710	White floral bud	79.730
	SRR3591711	White flower	40.839
	SRR3591712	Green floral bud	65.771
	SRR3591713	Yellow flower	28.762
SRP173429	SRR8316895	Juvenile bud stage	69.228
	SRR8316896	Juvenile bud stage	82.372
	SRR8316897	Juvenile bud stage	55.273
	SRR8316894	Third green stage	26.181
	SRR8316900	Third green stage	68.556
	SRR8316901	Third green stage	67.153
	SRR8316898	Complete white stage	32.346
	SRR8316899	Complete white stage	69.624
	SRR8316903	Complete white stage	49.679
	SRR8316902	Silver flowering stage	20.100
	SRR8316904	Silver flowering stage	32.087
	SRR8316905	Silver flowering stage	15.157
	SRR8316906	Gold flowering stage	36.790
	SRR8316907	Gold flowering stage	32.737
	SRR8316908	Gold flowering stage	21.223
SRP132670	SRR6706286	Control	72.741
	SRR6706287	Light intensity 50%	67.551
	SRR6706288	Light intensity 20%	68.897
CNP0000432	CNS0095592	Slightly white alabastrum(diploid) 1	56.857
	CNS0095593	Slightly white alabastrum(diploid) 2	64.177
	CNS0095594	Slightly white alabastrum(diploid) 3	46.454
	CNS0095595	Whole white alabastrum(diploid) 2	74.395
	CNS0095596	Whole white alabastrum(diploid) 3	62.052
	CNS0095597	Whole white alabastrum(diploid) 4	85.173
	CNS0095598	Silvery flower (diploied) 1	98.885
	CNS0095599	Silvery flower (diploied) 2	104.618
	CNS0095600	Silvery flower (diploied) 3	95.184
	CNS0095601	Golden flower (diploid) 1	131.672
	CNS0095602	Golden flower (diploid) 2	119.587
	CNS0095603	Golden flower (diploid) 3	126.214
	CNS0095604	Slightly white alabastrum(tetraploid) 1	32.757
	CNS0095605	Slightly white alabastrum(tetraploid) 2	30.054
	CNS0095606	Slightly white alabastrum(tetraploid) 3	35.698
	CNS0095607	Whole white alabastrum(tetraploid) 1	55.609
	CNS0095608	Whole white alabastrum(tetraploid) 2	59.797
	CNS0095609	Whole white alabastrum(tetraploid) 3	58.585
	CNS0095610	Silvery flower (tetraploid) 1	51.696
	CNS0095611	Silvery flower (tetraploid) 2	65.242
	CNS0095612	Silvery flower (tetraploid) 3	41.465
	CNS0095613	Golden flower (tetraploid) 1	27.400
	CNS0095614	Golden flower (tetraploid) 2	46.610
	CNS0095615	Golden flower (tetraploid) 3	79.147
CRA001975	CRR073297	Stem 1	107.218
	CRR073298	Stem 2	89.397
	CRR073299	Stem 3	71.135
	CRR073300	Leaf 1	100.006
	CRR073301	Leaf 2	95.759
	CRR073302	Leaf 3	74.232
	CRR073303	Juvenile bud 1	74.514
	CRR073304	Juvenile bud 2	61.627
	CRR073305	Juvenile bud 3	48.351
	CRR073306	Third green 1	25.629
	CRR073307	Third green 2	25.189
	CRR073308	Third green 3	27.537
	CRR073309	Second white 1	21.758
	CRR073310	Second white 2	17.743
	CRR073311	Second white 3	19.886
	CRR073312	Silver flowering 1	35.708
	CRR073313	Silver flowering 2	30.700
	CRR073314	Silver flowering 3	23.375
	CRR073315	Gold flowering 1	38.124
	CRR073316	Gold flowering 2	56.154
	CRR073317	Gold flowering 3	31.214
	CRR073318	Tawny withering 1	54.917
	CRR073319	Tawny withering 2	67.574
	CRR073320	Tawny withering 3	50.912