Detail information of GWHGAAZE024786


Functional Annotation

DatabaseOrthologsE valueAnnotation
NrXP_006379355.16.22967E-10hypothetical protein POPTR_0009s15880g [Populus trichocarpa]
Swissprottr|Q9ZNT1|NB5R1_ARATH0.00000007NADH--cytochrome b5 reductase 1
trEMBLtr|U5G6U0|U5G6U0_POPTR2E-10NADH-cytochrome b5 reductase {ECO:0000256|RuleBase:RU361226}
TAIR10AT5G17770.10.000002NADH:cytochrome B5 reductase 1

Location And Transcript Sequence (JBrowse)

ScaffoldTypeStartEndStrand
GWHAAZE00000007gene4939823049398548-
GWHAAZE00000007mRNA4939823049398548-
GWHAAZE00000007exon4939823049398322-
GWHAAZE00000007exon4939850149398548-
GWHAAZE00000007CDS4939850149398548-
GWHAAZE00000007CDS4939823049398322-
Transcript Sequence

Network for GWHGAAZE024786

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist


Functional Module

Module IDFunction Annotation


Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
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Protein Sequence

Gene family

Gene familysubfamily
----

KEGG pathway

KO Enzyme pathway mapID
K00326E1.6.2.2 Amino sugar and nucleotide sugar metabolism map00520

Gene Ontology

GO term OntologyName

Expression pattern


Expression pattern detail

SRPSampleDescriptionTPM
SRP075780SRR3591705youngest leaf9.979
SRR3591706second leaf3.068
SRR3591707mature leaf0.461
SRR3591708Shoot apex4.699
SRR3591709Stem11.347
SRR3591710White floral bud0.000
SRR3591711White flower0.000
SRR3591712Green floral bud0.709
SRR3591713Yellow flower0.000
SRP173429 SRR8316895Juvenile bud stage 0.706
SRR8316896Juvenile bud stage 1.363
SRR8316897Juvenile bud stage 0.326
SRR8316894Third green stage 0.679
SRR8316900Third green stage 0.233
SRR8316901Third green stage 2.010
SRR8316898Complete white stage 0.227
SRR8316899Complete white stage 0.000
SRR8316903Complete white stage 0.151
SRR8316902Silver flowering stage0.194
SRR8316904Silver flowering stage0.000
SRR8316905Silver flowering stage0.181
SRR8316906Gold flowering stage 0.000
SRR8316907Gold flowering stage 0.000
SRR8316908Gold flowering stage 0.000
SRP132670SRR6706286Control0.507
SRR6706287Light intensity 50%0.178
SRR6706288Light intensity 20%0.501
CNP0000432CNS0095592Slightly white alabastrum(diploid) 13.711
CNS0095593Slightly white alabastrum(diploid) 25.904
CNS0095594Slightly white alabastrum(diploid) 33.795
CNS0095595Whole white alabastrum(diploid) 21.560
CNS0095596Whole white alabastrum(diploid) 31.498
CNS0095597Whole white alabastrum(diploid) 40.294
CNS0095598Silvery flower (diploied) 14.552
CNS0095599Silvery flower (diploied) 23.106
CNS0095600Silvery flower (diploied) 30.408
CNS0095601Golden flower (diploid) 12.837
CNS0095602Golden flower (diploid) 20.822
CNS0095603Golden flower (diploid) 31.601
CNS0095604Slightly white alabastrum(tetraploid) 12.463
CNS0095605Slightly white alabastrum(tetraploid) 22.008
CNS0095606Slightly white alabastrum(tetraploid) 30.704
CNS0095607Whole white alabastrum(tetraploid) 11.100
CNS0095608Whole white alabastrum(tetraploid) 20.664
CNS0095609Whole white alabastrum(tetraploid) 30.225
CNS0095610Silvery flower (tetraploid) 10.180
CNS0095611Silvery flower (tetraploid) 20.000
CNS0095612Silvery flower (tetraploid) 30.000
CNS0095613Golden flower (tetraploid) 10.000
CNS0095614Golden flower (tetraploid) 20.000
CNS0095615Golden flower (tetraploid) 30.000
CRA001975CRR073297Stem 10.164
CRR073298Stem 20.000
CRR073299Stem 30.267
CRR073300Leaf 10.434
CRR073301Leaf 21.205
CRR073302Leaf 31.025
CRR073303Juvenile bud 10.598
CRR073304Juvenile bud 20.495
CRR073305Juvenile bud 30.080
CRR073306Third green 10.000
CRR073307Third green 20.057
CRR073308Third green 30.000
CRR073309Second white 10.000
CRR073310Second white 20.015
CRR073311Second white 30.076
CRR073312Silver flowering 10.000
CRR073313Silver flowering 20.000
CRR073314Silver flowering 30.000
CRR073315Gold flowering 10.000
CRR073316Gold flowering 21.145
CRR073317Gold flowering 30.186
CRR073318Tawny withering 11.455
CRR073319Tawny withering 21.857
CRR073320Tawny withering 30.882