Gene detail

Detail information of GWHGAAZE024721

Functional Annotation

Database	Orthologs	E value	Annotation
Nr	KDO38713.1	8.0577E-102	hypothetical protein CISIN_1g0013441mg, partial [Citrus sinensis]
Swissprot	tr\|Q0WP44\|HASTY_ARATH	3E-71	Protein HASTY 1
trEMBL	tr\|A0A067DAZ9\|A0A067DAZ9_CITSI	3E-102	Uncharacterized protein {ECO:0000313\|EMBL:KDO38715.1} (Fragment)
TAIR10	AT3G05040.1	7E-63	ARM repeat superfamily protein

Location And Transcript Sequence (JBrowse)

Scaffold	Type	Start	End	Strand
GWHAAZE00000007	gene	48171082	48173961	+
GWHAAZE00000007	mRNA	48171082	48173961	+
GWHAAZE00000007	exon	48171082	48171146	+
GWHAAZE00000007	exon	48171207	48171501	+
GWHAAZE00000007	exon	48172191	48172377	+
GWHAAZE00000007	exon	48173882	48173961	+
GWHAAZE00000007	CDS	48171082	48171146	+
GWHAAZE00000007	CDS	48171207	48171501	+
GWHAAZE00000007	CDS	48172191	48172377	+
GWHAAZE00000007	CDS	48173882	48173961	+

Transcript Sequence
>GWHTAAZE024755 ATGCAATTTTTCTTCAACAAATGGACATGCTCTAAAGACAGTAGCTTTTATGGTGAATTATATCGCTTTCTTTTGAGTCATAGAAGCTTAGCCGTGCCGGCACTTCAGATAACCTTAGATGCTTTAAAATGGACAGATGGTGAAGCTGTGACTAAAATTTCCTCGTTCTGTGGGACCGTAATTCTCCTCGCTATCTTGACGAATAATGTGGAGCTTCGAGAATTTGTTTGTAAAGATTTGTTCTCTGCAATAATCCAAGGACTGGCCCTCGAGTCGAATGCTATTATTAGTGCTGACCTTGTTGGTCTTTGCCGTGAAATATTTATTTATCTATCTGATAGAGATCCAGCACCAAAGCAGATTTTACTATCGCTTCCCTGCATTACACCGCAAGCTATGGTTGCGTTTGAAGAAGCTTTGGCGAAGACCTTTAGTCCCAAGGAACAAAAGCAGCACATGAGGAGCTTGTTATTGTTAGCTACGGGAAACAAATTAAAAGCACTTGCTGCTCAAAAAAGTGTGAATGTTATCACAAATGTTTCTTCAATGAGGCCTCGCAATATGGCGTCTGCTCCAGAATCCAGAACTGAGGAAGGAGAATCAATCGGGCTGGCTGCAATTATGTGA

Network for GWHGAAZE024721

Network category	Network	Top300 PCC genelist
Coexpression Positive	Network	Top300 PCC genelist
Coexpression Negative	Network	Top300 PCC genelist

Functional Module

Module ID	Function Annotation

Protein Structure

Pfam accession	Pfam name	Alignment start	Alignment end	E-value
--	--	--	--	--

Protein Sequence

Gene family

Gene family	subfamily
--	--

KEGG pathway

KO	Enzyme	pathway	mapID
K14289	XPO5	RNA transport	map03013

Gene Ontology

GO term	Ontology	Name

Expression pattern

Expression pattern detail

SRP	Sample	Description	TPM
SRP075780	SRR3591705	youngest leaf	11.591
	SRR3591706	second leaf	6.018
	SRR3591707	mature leaf	6.247
	SRR3591708	Shoot apex	14.181
	SRR3591709	Stem	13.236
	SRR3591710	White floral bud	10.228
	SRR3591711	White flower	11.624
	SRR3591712	Green floral bud	13.725
	SRR3591713	Yellow flower	9.750
SRP173429	SRR8316895	Juvenile bud stage	10.089
	SRR8316896	Juvenile bud stage	13.057
	SRR8316897	Juvenile bud stage	6.555
	SRR8316894	Third green stage	4.416
	SRR8316900	Third green stage	15.577
	SRR8316901	Third green stage	11.362
	SRR8316898	Complete white stage	3.723
	SRR8316899	Complete white stage	15.606
	SRR8316903	Complete white stage	5.111
	SRR8316902	Silver flowering stage	3.970
	SRR8316904	Silver flowering stage	4.496
	SRR8316905	Silver flowering stage	1.273
	SRR8316906	Gold flowering stage	6.502
	SRR8316907	Gold flowering stage	6.096
	SRR8316908	Gold flowering stage	3.102
SRP132670	SRR6706286	Control	7.890
	SRR6706287	Light intensity 50%	8.659
	SRR6706288	Light intensity 20%	9.147
CNP0000432	CNS0095592	Slightly white alabastrum(diploid) 1	19.960
	CNS0095593	Slightly white alabastrum(diploid) 2	14.600
	CNS0095594	Slightly white alabastrum(diploid) 3	12.571
	CNS0095595	Whole white alabastrum(diploid) 2	13.645
	CNS0095596	Whole white alabastrum(diploid) 3	8.760
	CNS0095597	Whole white alabastrum(diploid) 4	10.282
	CNS0095598	Silvery flower (diploied) 1	11.290
	CNS0095599	Silvery flower (diploied) 2	8.475
	CNS0095600	Silvery flower (diploied) 3	11.598
	CNS0095601	Golden flower (diploid) 1	12.405
	CNS0095602	Golden flower (diploid) 2	8.903
	CNS0095603	Golden flower (diploid) 3	8.095
	CNS0095604	Slightly white alabastrum(tetraploid) 1	10.915
	CNS0095605	Slightly white alabastrum(tetraploid) 2	11.100
	CNS0095606	Slightly white alabastrum(tetraploid) 3	13.205
	CNS0095607	Whole white alabastrum(tetraploid) 1	6.608
	CNS0095608	Whole white alabastrum(tetraploid) 2	4.990
	CNS0095609	Whole white alabastrum(tetraploid) 3	7.838
	CNS0095610	Silvery flower (tetraploid) 1	8.052
	CNS0095611	Silvery flower (tetraploid) 2	7.946
	CNS0095612	Silvery flower (tetraploid) 3	8.961
	CNS0095613	Golden flower (tetraploid) 1	3.295
	CNS0095614	Golden flower (tetraploid) 2	5.828
	CNS0095615	Golden flower (tetraploid) 3	3.410
CRA001975	CRR073297	Stem 1	12.786
	CRR073298	Stem 2	10.601
	CRR073299	Stem 3	10.484
	CRR073300	Leaf 1	16.027
	CRR073301	Leaf 2	11.160
	CRR073302	Leaf 3	7.761
	CRR073303	Juvenile bud 1	16.618
	CRR073304	Juvenile bud 2	3.668
	CRR073305	Juvenile bud 3	8.892
	CRR073306	Third green 1	1.346
	CRR073307	Third green 2	0.813
	CRR073308	Third green 3	0.592
	CRR073309	Second white 1	1.193
	CRR073310	Second white 2	2.621
	CRR073311	Second white 3	2.326
	CRR073312	Silver flowering 1	2.314
	CRR073313	Silver flowering 2	2.923
	CRR073314	Silver flowering 3	1.154
	CRR073315	Gold flowering 1	8.506
	CRR073316	Gold flowering 2	8.662
	CRR073317	Gold flowering 3	4.675
	CRR073318	Tawny withering 1	12.728
	CRR073319	Tawny withering 2	15.745
	CRR073320	Tawny withering 3	13.970