Detail information of GWHGAAZE024624


Functional Annotation

DatabaseOrthologsE valueAnnotation
NrXP_007013901.11.4108E-162Heptahelical transmembrane protein2 [Theobroma cacao]
Swissprottr|Q84N34|HHP2_ARATH2E-148Heptahelical transmembrane protein 2
trEMBLtr|A0A061GNS6|A0A061GNS6_THECC5E-163Heptahelical transmembrane protein2 {ECO:0000313|EMBL:EOY31520.1}
TAIR10AT4G30850.27E-120heptahelical transmembrane protein2

Location And Transcript Sequence (JBrowse)

ScaffoldTypeStartEndStrand
GWHAAZE00000007gene4646646146473775-
GWHAAZE00000007mRNA4646646146473775-
GWHAAZE00000007exon4646646146467153-
GWHAAZE00000007exon4647129946471368-
GWHAAZE00000007exon4647283246472924-
GWHAAZE00000007exon4647350146473775-
GWHAAZE00000007CDS4647350146473775-
GWHAAZE00000007CDS4647283246472924-
GWHAAZE00000007CDS4647129946471368-
GWHAAZE00000007CDS4646646146467153-
Transcript Sequence

Network for GWHGAAZE024624

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist


Functional Module

Module IDFunction Annotation


Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF03006.21HlyIII813541.10E-72
Protein Sequence

Gene family

Gene familysubfamily
----

KEGG pathway

KO Enzyme pathway mapID
K07297ADIPOR AMPK signaling pathway map04152
Adipocytokine signaling pathwaymap04920
Longevity regulating pathwaymap04211

Gene Ontology

GO term OntologyName
GO:0016021cellular_componentintegral component of membrane

Expression pattern


Expression pattern detail

SRPSampleDescriptionTPM
SRP075780SRR3591705youngest leaf31.217
SRR3591706second leaf5.544
SRR3591707mature leaf7.048
SRR3591708Shoot apex21.059
SRR3591709Stem15.785
SRR3591710White floral bud91.743
SRR3591711White flower49.152
SRR3591712Green floral bud20.408
SRR3591713Yellow flower67.808
SRP173429 SRR8316895Juvenile bud stage 15.569
SRR8316896Juvenile bud stage 29.570
SRR8316897Juvenile bud stage 9.041
SRR8316894Third green stage 6.219
SRR8316900Third green stage 11.809
SRR8316901Third green stage 28.826
SRR8316898Complete white stage 9.195
SRR8316899Complete white stage 14.385
SRR8316903Complete white stage 14.824
SRR8316902Silver flowering stage13.292
SRR8316904Silver flowering stage17.043
SRR8316905Silver flowering stage8.038
SRR8316906Gold flowering stage 39.516
SRR8316907Gold flowering stage 33.763
SRR8316908Gold flowering stage 36.706
SRP132670SRR6706286Control23.890
SRR6706287Light intensity 50%19.128
SRR6706288Light intensity 20%14.144
CNP0000432CNS0095592Slightly white alabastrum(diploid) 117.337
CNS0095593Slightly white alabastrum(diploid) 212.417
CNS0095594Slightly white alabastrum(diploid) 322.576
CNS0095595Whole white alabastrum(diploid) 212.857
CNS0095596Whole white alabastrum(diploid) 38.380
CNS0095597Whole white alabastrum(diploid) 410.136
CNS0095598Silvery flower (diploied) 113.681
CNS0095599Silvery flower (diploied) 220.561
CNS0095600Silvery flower (diploied) 332.675
CNS0095601Golden flower (diploid) 125.262
CNS0095602Golden flower (diploid) 240.486
CNS0095603Golden flower (diploid) 339.601
CNS0095604Slightly white alabastrum(tetraploid) 18.828
CNS0095605Slightly white alabastrum(tetraploid) 28.489
CNS0095606Slightly white alabastrum(tetraploid) 311.314
CNS0095607Whole white alabastrum(tetraploid) 17.179
CNS0095608Whole white alabastrum(tetraploid) 26.648
CNS0095609Whole white alabastrum(tetraploid) 36.586
CNS0095610Silvery flower (tetraploid) 121.891
CNS0095611Silvery flower (tetraploid) 220.973
CNS0095612Silvery flower (tetraploid) 320.493
CNS0095613Golden flower (tetraploid) 124.729
CNS0095614Golden flower (tetraploid) 222.558
CNS0095615Golden flower (tetraploid) 323.462
CRA001975CRR073297Stem 124.538
CRR073298Stem 225.692
CRR073299Stem 325.551
CRR073300Leaf 118.806
CRR073301Leaf 223.226
CRR073302Leaf 317.131
CRR073303Juvenile bud 112.850
CRR073304Juvenile bud 216.592
CRR073305Juvenile bud 320.140
CRR073306Third green 115.139
CRR073307Third green 234.335
CRR073308Third green 321.689
CRR073309Second white 16.918
CRR073310Second white 29.718
CRR073311Second white 36.531
CRR073312Silver flowering 120.418
CRR073313Silver flowering 227.443
CRR073314Silver flowering 326.688
CRR073315Gold flowering 131.205
CRR073316Gold flowering 233.673
CRR073317Gold flowering 335.858
CRR073318Tawny withering 196.342
CRR073319Tawny withering 2112.499
CRR073320Tawny withering 375.789