Gene detail

Detail information of GWHGAAZE024555

Functional Annotation

Database	Orthologs	E value	Annotation
Nr	XP_010656540.1	0	PREDICTED: uncharacterized protein LOC100251651 isoform X1 [Vitis vinifera]
COG	YP_001958461.1	1E-27	hypothetical protein Aasi_1443
Swissprot	tr\|Q05609\|CTR1_ARATH	3E-49	Serine/threonine-protein kinase CTR1
trEMBL	tr\|F6HCI9\|F6HCI9_VITVI	0	Putative uncharacterized protein {ECO:0000313\|EMBL:CCB49935.1}
TAIR10	AT3G46920.1	3E-167	Protein kinase superfamily protein with octicosapeptide/Phox/Bem1p domain

Location And Transcript Sequence (JBrowse)

Scaffold	Type	Start	End	Strand
GWHAAZE00000007	gene	45050436	45059725	+
GWHAAZE00000007	mRNA	45050436	45059725	+
GWHAAZE00000007	exon	45050436	45052848	+
GWHAAZE00000007	exon	45052937	45053130	+
GWHAAZE00000007	exon	45053906	45053977	+
GWHAAZE00000007	exon	45054096	45054248	+
GWHAAZE00000007	exon	45054524	45054687	+
GWHAAZE00000007	exon	45057463	45057610	+
GWHAAZE00000007	exon	45057908	45058030	+
GWHAAZE00000007	exon	45058251	45058338	+
GWHAAZE00000007	exon	45059511	45059725	+
GWHAAZE00000007	CDS	45050436	45052848	+
GWHAAZE00000007	CDS	45052937	45053130	+
GWHAAZE00000007	CDS	45053906	45053977	+
GWHAAZE00000007	CDS	45054096	45054248	+
GWHAAZE00000007	CDS	45054524	45054687	+
GWHAAZE00000007	CDS	45057463	45057610	+
GWHAAZE00000007	CDS	45057908	45058030	+
GWHAAZE00000007	CDS	45058251	45058338	+
GWHAAZE00000007	CDS	45059511	45059725	+

Transcript Sequence
>GWHTAAZE024589 ATGAATATAATAAGCTTGTCGAGATCGCCTGATGGGTCATCTAAGCTAAGGGTGTTCTTGTTTTCGACTTCAGAGCCTAATTCTCCTAGTTTGGGACAACTTGGGGATTTGGAATGTAGTGGGCAACGATATGTTGAGGCGGTGAATGGGATTGGGGATGGGGTGGTTAGTGGTGTTATAATGAGGAAGGATAGTATAGCGAGTGTGTCGACACAAAATTCGGAATGCGGTAATGAAGGTGTTGATATCTCGGCCCATGGTCATGGGAACTATTCTGGGGGGCCACCCTCTACCGGCGAGTTATCACCTAGAGGAAACTTTTCAACCTCGTCTCAAGAAACTTCTCCAAGATTGGTGTGTTTGGATACTAATTCTGCAATTTATGTTGAAGCTTCTTGTGCTCCATTGGGTATCCCAATGGTCAAGTCTCAAATTTTATCACCTCGATCTGAGCAAGAATTTGAGAGGTTTGTACCTGTTAATACACAGCGACAACAAATGGGGTACGATTTACAACATGGAGGGACTTTTCAACAACCAGCATCTTACTTGCAGCCATGCGTTGATCCTCACCAAAAACTTCTGAATCGTACAGACTATGTACAGCTTCCTTCGCAAATGGGGCTTCAGGCTCAGCTCTTGGGGAGTAGTACTGGCACTGTGTACACCCAATCGCAGGTCCATGATAACCCTGTCAGTGCTTCTGCTCATCAGTATATTCCTGCTGTGCAAATGCCAATTGCTCATTCCTCTCATGTTAGAATAAGACCGAGTCCTGTACGTCCAATGGTTCAACAAGCCCAACAAGTTCAGTTAGAATATTTTCCAGATGAAAGCACTTTCGGGCAAAGGGTTGTGCAGTTGCCAACTGACAATAGCTACTATCAATCTCAAGTCAGTCCTTCAGTGATAGGAGGAGGTTATAGCTGGCATCAAGCTCCACAGCCAGAGCAAACAACGTTACCTGAGGGCTGGGTACCTCTTCAACCGGTGAAGTTTCACGAGAAAACATCTAAATACGAGGATAGTCATATGTGTCAGAAAGCCTTATCACATGCACATTCTGATACAATAACACATGAGCAAAAAGACAGCCCTCCGTCAACCTTGTCTAGTCCAAACTCGGTTAACGAGAACTTCCCTTCCCCGGACCATACAAGAGTTCGCCCCATAAACCGGGCTGTGGTAACTGGAGCTGAAAAACTGCAAGTAGAGGGAGTTGGGGGCTTCCCAAATTTTGAAACACTATATGAAAGTGATAAAACTGTTCTCCATAAAGCTGAAAATCTTGACCATTCTAAGGTTGGTATGGTAAGGTTGGCAGATGGCAAACAATCTCCTTATGGTGTAGTCATGGGCACAATTCCTCAGTTGTGCCAAGAAAATACTGTCCAGCAGGTTATGGTGCCAACACAATTCCTTAAACAAGAAGATTTAATGAGTAAACCGGTTTACAGTGATAATTCTCCTGGTGGAGGCACATCTTTACAAACTTTAGACCACCAGTTTCATGATTATCCTAAAGACTATTCTGCCGAACTTCGTGGTATTAATCCAATTACTTCAGAATCTTGCTGTACTTCTGATACAAGACAAATTGACGGGAAAGTAAAAAATCTCCAGACAGCCCCTCCCGAAGTTTTACACGTGACAGATATTAAATCTGCATTTGATATTCCCAAAAAAGAGGATGCCTTTGAAGTTAAGTCACAACAGATTATAGGTAGGGAGCGATATATAGACAATACCGTTAGCGATGCCAAAATACTTCTTGAATCAAATCATATAAAACAAAATGAGATGACTCTTTGCTCATTAAGTGATGTTCCTATGTTGCATAATTTTCGTCCAATTGAGTCCTACGAAGTGGCACAACCTTCTTTTTTAGCTAATCATGGGTATCAGCGTTCAAAGTTCTCGGTTAACAATGTGGATGCTGATGAGGTGTTTTATGGGAGCCCCGCATCTTCTAGTGGTGATACATCACAGGTAACTGATCAAAGAATCCCACCAATTGGTGAATGGAAGGATATCATTTCACCATTCCATGCACAAATAACCCACAGTGACATTGAAGTCAATCCATCAACTAGCAATTTTTCATCTATATGTACATCTAATAAGGTTGGGGATATCCAAGATAGCTCAAGTTCACTTTTTAGCAACCAACATCCATGGAATTTGCGGCATGATATTCATTTTCGACCTCCTAAATCAAACAAAATTCCAATGAAGAATGAAACCTTTGGTACCACGGATCCTTTTGGTGGCAATCGTTTAGGCTATTGTGGGGAATCACCAACGTATAGTAGCGGGGGTTCAATATCAGAAATGCGTTTAGAGGACGGATTTTTTTATCACCCGTCTTGTAATTTGGCCACAGATTTTGGTCAAGAGCAACGTTCCGTCAAAGGTTTGACAGACGAACGAATCAAGCAAGAACTCCAGGCTGTTGCAGAAGGAGTTGCTGTATCTGTTCTTCAACCGATCATGCCTTTGAATTCTCAGTTAATCCTACCTGGGAGGGCCGAGTCATCAGAATCCAATCAAAATAACGAACTTAAGAATACTAATACTGAAATGCACCAACATGGAGATAAACTTGAGGACGTCAACGCCAAAACAACAGAAAAGTCAAATCTTGGTTCTCCCGTATCAGATGGCATTGGCCGCTTACAGATTATAAAAGACTCTGACCTTGAAGAGCTTCGAGATTTAGGTTCTGGCACCTTTGGTACTGTTTACCATGGAAAGTGGAGGGGTTCAGATGTTGCAATCAAAAGAATTAATGATAGGTGCTTTGCTGGAAAACCTTCAGAACAAGAACGCATGAGAGATGACTTCTGGAATGAAGCAATCAAGCTTGCTGATTTGCACCATCCAAATGTGGTTGCATTTTACGGTGTTGTGCTTGATGGTCCTGGCGATACCGTTGCAACCGTAACCGAATACATGGCTAATGGTTCTTTAAGAAATGCTATAGAAAGGAATGAGAGGAACCTTGATAACCGAAAACGCCTCATAATTGCCATGGATGTGGCATTCGGAATGGAGTACTTGCATGGAAAGAATATTGTACACTTCGACTTGAAAAGTGATAATTTACTTGTCAATCTTCGCGATCCGCACCGCCCAATATGCAAGGTTGGTGATTTGGGATTATCTAAGGTGAAATGTCAAACACTAATCTCTGGCGGTGTCCGCGGAACACTTCCTTGGATGGCGCCAGAGCTTCTAAATGGCAGCAGCAGCCTTGTCTCTGAGAAGGTTGATGTTTTCTCGTTTGGGATGGTAATGTGGGAACTTCTTACCGGAGATGAACTCTATGGAGACTTGCATTATGGAGCTATCATCGGCGGCATTGTGAGCAACACACTTCGACCACCGGTGCCAGAATCTTGTGACCCAGAATGGAGAGCTCTAATGGAGAGGTGCTGGTCCTCGGACCCTTCAAAAAGGCCAACCTTCACCGAGATAGCGAATCAGCTACGTATTATTGCATCTAAGGTTCTGCCAAGAGCGCAAAACCAACAATCTCGTCTCTCTCCACAGCTTCAAATTAAAAATTAA

Network for GWHGAAZE024555

Network category	Network	Top300 PCC genelist
Coexpression Positive	Network	Top300 PCC genelist
Coexpression Negative	Network	Top300 PCC genelist

Functional Module

Module ID	Function Annotation

Protein Structure

Pfam accession	Pfam name	Alignment start	Alignment end	E-value
PF07714.18	PK_Tyr_Ser-Thr	902	1163	8.20E-58

Protein Sequence

>GWHPAAZE024573
MNIISLSRSPDGSSKLRVFLFSTSEPNSPSLGQLGDLECSGQRYVEAVNGIGDGVVSGVIMRKDSIASVSTQNSECGNEGVDISAHGHGNYSGGPPSTGELSPRGNFSTSSQETSPRLVCLDTNSAIYVEASCAPLGIPMVKSQILSPRSEQEFERFVPVNTQRQQMGYDLQHGGTFQQPASYLQPCVDPHQKLLNRTDYVQLPSQMGLQAQLLGSSTGTVYTQSQVHDNPVSASAHQYIPAVQMPIAHSSHVRIRPSPVRPMVQQAQQVQLEYFPDESTFGQRVVQLPTDNSYYQSQVSPSVIGGGYSWHQAPQPEQTTLPEGWVPLQPVKFHEKTSKYEDSHMCQKALSHAHSDTITHEQKDSPPSTLSSPNSVNENFPSPDHTRVRPINRAVVTGAEKLQVEGVGGFPNFETLYESDKTVLHKAENLDHSKVGMVRLADGKQSPYGVVMGTIPQLCQENTVQQVMVPTQFLKQEDLMSKPVYSDNSPGGGTSLQTLDHQFHDYPKDYSAELRGINPITSESCCTSDTRQIDGKVKNLQTAPPEVLHVTDIKSAFDIPKKEDAFEVKSQQIIGRERYIDNTVSDAKILLESNHIKQNEMTLCSLSDVPMLHNFRPIESYEVAQPSFLANHGYQRSKFSVNNVDADEVFYGSPASSSGDTSQVTDQRIPPIGEWKDIISPFHAQITHSDIEVNPSTSNFSSICTSNKVGDIQDSSSSLFSNQHPWNLRHDIHFRPPKSNKIPMKNETFGTTDPFGGNRLGYCGESPTYSSGGSISEMRLEDGFFYHPSCNLATDFGQEQRSVKGLTDERIKQELQAVAEGVAVSVLQPIMPLNSQLILPGRAESSESNQNNELKNTNTEMHQHGDKLEDVNAKTTEKSNLGSPVSDGIGRLQIIKDSDLEELRDLGSGTFGTVYHGKWRGSDVAIKRINDRCFAGKPSEQERMRDDFWNEAIKLADLHHPNVVAFYGVVLDGPGDTVATVTEYMANGSLRNAIERNERNLDNRKRLIIAMDVAFGMEYLHGKNIVHFDLKSDNLLVNLRDPHRPICKVGDLGLSKVKCQTLISGGVRGTLPWMAPELLNGSSSLVSEKVDVFSFGMVMWELLTGDELYGDLHYGAIIGGIVSNTLRPPVPESCDPEWRALMERCWSSDPSKRPTFTEIANQLRIIASKVLPRAQNQQSRLSPQLQIKN

Gene family

Gene family	subfamily
Protein Kinases Family	TKL-Pl-6

KEGG pathway

KO	Enzyme	pathway	mapID
--	--	--	--

Gene Ontology

GO term	Ontology	Name
GO:0006468	biological_process	protein phosphorylation
GO:0004672	molecular_function	protein kinase activity
GO:0005524	molecular_function	ATP binding

Expression pattern

Expression pattern detail

SRP	Sample	Description	TPM
SRP075780	SRR3591705	youngest leaf	2.238
	SRR3591706	second leaf	0.783
	SRR3591707	mature leaf	1.334
	SRR3591708	Shoot apex	2.061
	SRR3591709	Stem	3.069
	SRR3591710	White floral bud	17.391
	SRR3591711	White flower	2.887
	SRR3591712	Green floral bud	16.735
	SRR3591713	Yellow flower	1.805
SRP173429	SRR8316895	Juvenile bud stage	3.206
	SRR8316896	Juvenile bud stage	8.149
	SRR8316897	Juvenile bud stage	3.443
	SRR8316894	Third green stage	3.257
	SRR8316900	Third green stage	10.355
	SRR8316901	Third green stage	12.111
	SRR8316898	Complete white stage	0.259
	SRR8316899	Complete white stage	1.204
	SRR8316903	Complete white stage	0.845
	SRR8316902	Silver flowering stage	0.248
	SRR8316904	Silver flowering stage	0.590
	SRR8316905	Silver flowering stage	0.254
	SRR8316906	Gold flowering stage	0.471
	SRR8316907	Gold flowering stage	0.523
	SRR8316908	Gold flowering stage	0.176
SRP132670	SRR6706286	Control	5.158
	SRR6706287	Light intensity 50%	5.795
	SRR6706288	Light intensity 20%	4.977
CNP0000432	CNS0095592	Slightly white alabastrum(diploid) 1	9.989
	CNS0095593	Slightly white alabastrum(diploid) 2	6.507
	CNS0095594	Slightly white alabastrum(diploid) 3	9.555
	CNS0095595	Whole white alabastrum(diploid) 2	13.691
	CNS0095596	Whole white alabastrum(diploid) 3	17.427
	CNS0095597	Whole white alabastrum(diploid) 4	15.147
	CNS0095598	Silvery flower (diploied) 1	1.278
	CNS0095599	Silvery flower (diploied) 2	2.169
	CNS0095600	Silvery flower (diploied) 3	0.988
	CNS0095601	Golden flower (diploid) 1	1.813
	CNS0095602	Golden flower (diploid) 2	1.071
	CNS0095603	Golden flower (diploid) 3	1.008
	CNS0095604	Slightly white alabastrum(tetraploid) 1	13.952
	CNS0095605	Slightly white alabastrum(tetraploid) 2	12.613
	CNS0095606	Slightly white alabastrum(tetraploid) 3	0.012
	CNS0095607	Whole white alabastrum(tetraploid) 1	21.987
	CNS0095608	Whole white alabastrum(tetraploid) 2	23.122
	CNS0095609	Whole white alabastrum(tetraploid) 3	13.718
	CNS0095610	Silvery flower (tetraploid) 1	0.190
	CNS0095611	Silvery flower (tetraploid) 2	1.095
	CNS0095612	Silvery flower (tetraploid) 3	2.806
	CNS0095613	Golden flower (tetraploid) 1	0.177
	CNS0095614	Golden flower (tetraploid) 2	0.034
	CNS0095615	Golden flower (tetraploid) 3	1.357
CRA001975	CRR073297	Stem 1	3.585
	CRR073298	Stem 2	3.224
	CRR073299	Stem 3	1.441
	CRR073300	Leaf 1	8.733
	CRR073301	Leaf 2	7.756
	CRR073302	Leaf 3	3.217
	CRR073303	Juvenile bud 1	6.251
	CRR073304	Juvenile bud 2	3.735
	CRR073305	Juvenile bud 3	0.899
	CRR073306	Third green 1	2.876
	CRR073307	Third green 2	2.065
	CRR073308	Third green 3	2.588
	CRR073309	Second white 1	0.297
	CRR073310	Second white 2	0.883
	CRR073311	Second white 3	0.734
	CRR073312	Silver flowering 1	2.943
	CRR073313	Silver flowering 2	3.075
	CRR073314	Silver flowering 3	1.828
	CRR073315	Gold flowering 1	2.781
	CRR073316	Gold flowering 2	0.827
	CRR073317	Gold flowering 3	0.555
	CRR073318	Tawny withering 1	3.533
	CRR073319	Tawny withering 2	3.989
	CRR073320	Tawny withering 3	2.365