Detail information of GWHGAAZE024438


Functional Annotation

DatabaseOrthologsE valueAnnotation
NrNP_001268145.10CBL-interacting protein kinase 09 [Vitis vinifera]
COGYP_002432751.14E-32serine/threonine protein kinase
Swissprottr|Q9LDI3|CIPKO_ARATH0CBL-interacting serine/threonine-protein kinase 24
trEMBLtr|A5BZV3|A5BZV3_VITVI0CBL-interacting protein kinase 09 {ECO:0000313|EMBL:ACQ83525.1}
TAIR10AT5G35410.10Protein kinase superfamily protein

Location And Transcript Sequence (JBrowse)

ScaffoldTypeStartEndStrand
GWHAAZE00000007gene4227970842288435-
GWHAAZE00000007mRNA4227970842288435-
GWHAAZE00000007exon4228827142288435-
GWHAAZE00000007exon4228702642287088-
GWHAAZE00000007exon4228683442286905-
GWHAAZE00000007exon4228557642285683-
GWHAAZE00000007exon4228541042285481-
GWHAAZE00000007exon4228526942285322-
GWHAAZE00000007exon4228449742284622-
GWHAAZE00000007exon4228391342284002-
GWHAAZE00000007exon4228273342282855-
GWHAAZE00000007exon4228172842281847-
GWHAAZE00000007exon4228137642281492-
GWHAAZE00000007exon4228116642281222-
GWHAAZE00000007exon4228097342281047-
GWHAAZE00000007exon4227970842279938-
GWHAAZE00000007CDS4228827142288435-
GWHAAZE00000007CDS4228702642287088-
GWHAAZE00000007CDS4228683442286905-
GWHAAZE00000007CDS4228557642285683-
GWHAAZE00000007CDS4228541042285481-
GWHAAZE00000007CDS4228526942285322-
GWHAAZE00000007CDS4228449742284622-
GWHAAZE00000007CDS4228391342284002-
GWHAAZE00000007CDS4228273342282855-
GWHAAZE00000007CDS4228172842281847-
GWHAAZE00000007CDS4228137642281492-
GWHAAZE00000007CDS4228116642281222-
GWHAAZE00000007CDS4228097342281047-
GWHAAZE00000007CDS4227986142279938-
GWHAAZE00000007three_prime_UTR4227970842279860-
Transcript Sequence

Network for GWHGAAZE024438

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist


Functional Module

Module IDFunction Annotation


Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF00069.26Pkinase112638.10E-71
PF03822.15NAF3063652.10E-19
Protein Sequence

Gene family

Gene familysubfamily
Protein Kinases FamilyCAMK_CAMKL-CHK1

KEGG pathway

KO Enzyme pathway mapID
--------

Gene Ontology

GO term OntologyName
GO:0006468biological_processprotein phosphorylation
GO:0007165biological_processsignal transduction
GO:0004672molecular_functionprotein kinase activity
GO:0005524molecular_functionATP binding

Expression pattern


Expression pattern detail

SRPSampleDescriptionTPM
SRP075780SRR3591705youngest leaf13.320
SRR3591706second leaf5.622
SRR3591707mature leaf5.147
SRR3591708Shoot apex15.520
SRR3591709Stem16.426
SRR3591710White floral bud12.166
SRR3591711White flower15.525
SRR3591712Green floral bud12.889
SRR3591713Yellow flower7.216
SRP173429 SRR8316895Juvenile bud stage 9.074
SRR8316896Juvenile bud stage 15.686
SRR8316897Juvenile bud stage 6.640
SRR8316894Third green stage 5.544
SRR8316900Third green stage 15.784
SRR8316901Third green stage 13.566
SRR8316898Complete white stage 4.720
SRR8316899Complete white stage 22.883
SRR8316903Complete white stage 7.429
SRR8316902Silver flowering stage4.288
SRR8316904Silver flowering stage6.093
SRR8316905Silver flowering stage2.335
SRR8316906Gold flowering stage 7.336
SRR8316907Gold flowering stage 8.929
SRR8316908Gold flowering stage 7.671
SRP132670SRR6706286Control15.163
SRR6706287Light intensity 50%13.946
SRR6706288Light intensity 20%16.562
CNP0000432CNS0095592Slightly white alabastrum(diploid) 110.066
CNS0095593Slightly white alabastrum(diploid) 29.581
CNS0095594Slightly white alabastrum(diploid) 38.804
CNS0095595Whole white alabastrum(diploid) 27.726
CNS0095596Whole white alabastrum(diploid) 37.070
CNS0095597Whole white alabastrum(diploid) 47.793
CNS0095598Silvery flower (diploied) 123.685
CNS0095599Silvery flower (diploied) 219.507
CNS0095600Silvery flower (diploied) 315.370
CNS0095601Golden flower (diploid) 125.286
CNS0095602Golden flower (diploid) 219.611
CNS0095603Golden flower (diploid) 320.584
CNS0095604Slightly white alabastrum(tetraploid) 19.134
CNS0095605Slightly white alabastrum(tetraploid) 27.045
CNS0095606Slightly white alabastrum(tetraploid) 314.712
CNS0095607Whole white alabastrum(tetraploid) 17.198
CNS0095608Whole white alabastrum(tetraploid) 24.512
CNS0095609Whole white alabastrum(tetraploid) 311.856
CNS0095610Silvery flower (tetraploid) 115.112
CNS0095611Silvery flower (tetraploid) 216.676
CNS0095612Silvery flower (tetraploid) 312.397
CNS0095613Golden flower (tetraploid) 15.861
CNS0095614Golden flower (tetraploid) 28.695
CNS0095615Golden flower (tetraploid) 33.615
CRA001975CRR073297Stem 115.105
CRR073298Stem 216.956
CRR073299Stem 310.727
CRR073300Leaf 111.087
CRR073301Leaf 215.111
CRR073302Leaf 310.255
CRR073303Juvenile bud 17.779
CRR073304Juvenile bud 26.010
CRR073305Juvenile bud 38.941
CRR073306Third green 11.412
CRR073307Third green 21.403
CRR073308Third green 30.748
CRR073309Second white 13.211
CRR073310Second white 24.639
CRR073311Second white 35.024
CRR073312Silver flowering 10.858
CRR073313Silver flowering 21.214
CRR073314Silver flowering 31.894
CRR073315Gold flowering 13.927
CRR073316Gold flowering 29.550
CRR073317Gold flowering 35.029
CRR073318Tawny withering 116.405
CRR073319Tawny withering 29.146
CRR073320Tawny withering 312.616