Detail information of GWHGAAZE024334


Functional Annotation

DatabaseOrthologsE valueAnnotation
NrCDP02189.10unnamed protein product [Coffea canephora]
trEMBLtr|A0A068U232|A0A068U232_COFCA0Coffea canephora DH200=94 genomic scaffold, scaffold_8 {ECO:0000313|EMBL:CDP02189.1}
TAIR10AT5G15070.10Phosphoglycerate mutase-like family protein

Location And Transcript Sequence (JBrowse)

ScaffoldTypeStartEndStrand
GWHAAZE00000007gene4018186240201592-
GWHAAZE00000007mRNA4018186240201592-
GWHAAZE00000007exon4018186240182125-
GWHAAZE00000007exon4018268540182759-
GWHAAZE00000007exon4018356240183729-
GWHAAZE00000007exon4018445940184516-
GWHAAZE00000007exon4018463140184896-
GWHAAZE00000007exon4018572740185798-
GWHAAZE00000007exon4018591140185977-
GWHAAZE00000007exon4018646240186506-
GWHAAZE00000007exon4018666740186908-
GWHAAZE00000007exon4018781440187936-
GWHAAZE00000007exon4019050040190574-
GWHAAZE00000007exon4019066140190723-
GWHAAZE00000007exon4019092940191011-
GWHAAZE00000007exon4019192140191963-
GWHAAZE00000007exon4019213940192297-
GWHAAZE00000007exon4019250540192586-
GWHAAZE00000007exon4019308440193154-
GWHAAZE00000007exon4019325140193350-
GWHAAZE00000007exon4019344140193647-
GWHAAZE00000007exon4019588440195969-
GWHAAZE00000007exon4019624140196315-
GWHAAZE00000007exon4019675440196846-
GWHAAZE00000007exon4019768440197788-
GWHAAZE00000007exon4019850240198572-
GWHAAZE00000007exon4020038840200541-
GWHAAZE00000007exon4020114140201276-
GWHAAZE00000007exon4020150140201592-
GWHAAZE00000007CDS4020150140201592-
GWHAAZE00000007CDS4020114140201276-
GWHAAZE00000007CDS4020038840200541-
GWHAAZE00000007CDS4019850240198572-
GWHAAZE00000007CDS4019768440197788-
GWHAAZE00000007CDS4019675440196846-
GWHAAZE00000007CDS4019624140196315-
GWHAAZE00000007CDS4019588440195969-
GWHAAZE00000007CDS4019344140193647-
GWHAAZE00000007CDS4019325140193350-
GWHAAZE00000007CDS4019308440193154-
GWHAAZE00000007CDS4019250540192586-
GWHAAZE00000007CDS4019213940192297-
GWHAAZE00000007CDS4019192140191963-
GWHAAZE00000007CDS4019092940191011-
GWHAAZE00000007CDS4019066140190723-
GWHAAZE00000007CDS4019050040190574-
GWHAAZE00000007CDS4018781440187936-
GWHAAZE00000007CDS4018666740186908-
GWHAAZE00000007CDS4018646240186506-
GWHAAZE00000007CDS4018591140185977-
GWHAAZE00000007CDS4018572740185798-
GWHAAZE00000007CDS4018463140184896-
GWHAAZE00000007CDS4018445940184516-
GWHAAZE00000007CDS4018356240183729-
GWHAAZE00000007CDS4018268540182759-
GWHAAZE00000007CDS4018186240182125-
Transcript Sequence

Network for GWHGAAZE024334

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist


Functional Module

Module IDFunction Annotation


Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF00328.23His_Phos_23309284.20E-137
Protein Sequence

Gene family

Gene familysubfamily
----

KEGG pathway

KO Enzyme pathway mapID
K13024PPIP5K, VIP Phosphatidylinositol signaling system map04070

Gene Ontology

GO term OntologyName

Expression pattern


Expression pattern detail

SRPSampleDescriptionTPM
SRP075780SRR3591705youngest leaf47.471
SRR3591706second leaf20.710
SRR3591707mature leaf16.286
SRR3591708Shoot apex27.887
SRR3591709Stem32.295
SRR3591710White floral bud51.059
SRR3591711White flower57.475
SRR3591712Green floral bud27.332
SRR3591713Yellow flower27.732
SRP173429 SRR8316895Juvenile bud stage 27.540
SRR8316896Juvenile bud stage 41.989
SRR8316897Juvenile bud stage 20.362
SRR8316894Third green stage 16.642
SRR8316900Third green stage 36.748
SRR8316901Third green stage 39.766
SRR8316898Complete white stage 25.542
SRR8316899Complete white stage 44.852
SRR8316903Complete white stage 78.768
SRR8316902Silver flowering stage34.241
SRR8316904Silver flowering stage65.506
SRR8316905Silver flowering stage30.937
SRR8316906Gold flowering stage 85.220
SRR8316907Gold flowering stage 70.423
SRR8316908Gold flowering stage 75.592
SRP132670SRR6706286Control37.858
SRR6706287Light intensity 50%34.865
SRR6706288Light intensity 20%34.697
CNP0000432CNS0095592Slightly white alabastrum(diploid) 117.750
CNS0095593Slightly white alabastrum(diploid) 212.637
CNS0095594Slightly white alabastrum(diploid) 315.148
CNS0095595Whole white alabastrum(diploid) 212.603
CNS0095596Whole white alabastrum(diploid) 313.085
CNS0095597Whole white alabastrum(diploid) 413.281
CNS0095598Silvery flower (diploied) 130.432
CNS0095599Silvery flower (diploied) 226.814
CNS0095600Silvery flower (diploied) 359.096
CNS0095601Golden flower (diploid) 122.594
CNS0095602Golden flower (diploid) 228.916
CNS0095603Golden flower (diploid) 330.121
CNS0095604Slightly white alabastrum(tetraploid) 117.667
CNS0095605Slightly white alabastrum(tetraploid) 215.759
CNS0095606Slightly white alabastrum(tetraploid) 324.136
CNS0095607Whole white alabastrum(tetraploid) 114.052
CNS0095608Whole white alabastrum(tetraploid) 213.686
CNS0095609Whole white alabastrum(tetraploid) 327.485
CNS0095610Silvery flower (tetraploid) 167.925
CNS0095611Silvery flower (tetraploid) 269.244
CNS0095612Silvery flower (tetraploid) 374.490
CNS0095613Golden flower (tetraploid) 126.196
CNS0095614Golden flower (tetraploid) 236.069
CNS0095615Golden flower (tetraploid) 325.866
CRA001975CRR073297Stem 138.806
CRR073298Stem 233.168
CRR073299Stem 316.346
CRR073300Leaf 132.038
CRR073301Leaf 224.150
CRR073302Leaf 312.741
CRR073303Juvenile bud 111.498
CRR073304Juvenile bud 211.868
CRR073305Juvenile bud 317.643
CRR073306Third green 112.474
CRR073307Third green 29.676
CRR073308Third green 313.616
CRR073309Second white 15.727
CRR073310Second white 210.590
CRR073311Second white 310.292
CRR073312Silver flowering 113.790
CRR073313Silver flowering 210.680
CRR073314Silver flowering 313.255
CRR073315Gold flowering 111.022
CRR073316Gold flowering 229.957
CRR073317Gold flowering 38.148
CRR073318Tawny withering 115.215
CRR073319Tawny withering 211.680
CRR073320Tawny withering 318.796