Detail information of GWHGAAZE024229


Functional Annotation

DatabaseOrthologsE valueAnnotation
NrAFK48674.14.24594E-64unknown [Lotus japonicus]
Swissprottr|Q96520|PER12_ARATH2E-50Peroxidase 12 (Precursor)
trEMBLtr|I3T832|I3T832_LOTJA2E-64Uncharacterized protein {ECO:0000313|EMBL:AFK48674.1}
TAIR10AT1G71695.11E-41Peroxidase superfamily protein

Location And Transcript Sequence (JBrowse)

ScaffoldTypeStartEndStrand
GWHAAZE00000007gene3810344638104976+
GWHAAZE00000007mRNA3810344638104976+
GWHAAZE00000007exon3810344638103688+
GWHAAZE00000007exon3810476438104976+
GWHAAZE00000007CDS3810344638103688+
GWHAAZE00000007CDS3810476438104976+
Transcript Sequence

Network for GWHGAAZE024229

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist


Functional Module

Module IDFunction Annotation


Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF00141.24peroxidase551461.90E-21
Protein Sequence

Gene family

Gene familysubfamily
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KEGG pathway

KO Enzyme pathway mapID
K00430E1.11.1.7 Metabolic pathways map01100
Biosynthesis of secondary metabolitesmap01110
Phenylpropanoid biosynthesismap00940

Gene Ontology

GO term OntologyName
GO:0055114biological_processoxidation-reduction process
GO:0006979biological_processresponse to oxidative stress
GO:0004601molecular_functionperoxidase activity
GO:0020037molecular_functionheme binding

Expression pattern

Created with Highcharts 5.0.4Chart context menuExpression pattern for GWHGAAZE024229.youngest leafsecond leafmature leafShoot apexStemWhite floral budWhite flowerGreen floral budYellow flowerJuvenile bud stage 1Juvenile bud stage 2Juvenile bud stage 3Third green stage 1Third green stage 2Third green stage 3Complete white stage 1Complete white stage 2Complete white stage 3Silver flowering stage 1Silver flowering stage 2Silver flowering stage 3Gold flowering stage 1Gold flowering stage 2Gold flowering stage 3Control 1Light intensity 50%Light intensity 20%Slightly white alabastrum(diploid) 1Slightly white alabastrum(diploid) 2Slightly white alabastrum(diploid) 3Whole white alabastrum(diploid) 1Whole white alabastrum(diploid) 2Whole white alabastrum(diploid) 3Silvery flower (diploied) 1Silvery flower (diploied) 2Silvery flower (diploied) 3Golden flower (diploid) 1Golden flower (diploid) 2Golden flower (diploid) 3Slightly white alabastrum(tetraploid) 1Slightly white alabastrum(tetraploid) 2Slightly white alabastrum(tetraploid) 3Whole white alabastrum(tetraploid) 1Whole white alabastrum(tetraploid) 2Whole white alabastrum(tetraploid) 3Silvery flower (tetraploid) 1Silvery flower (tetraploid) 2Silvery flower (tetraploid) 3Golden flower (tetraploid) 1Golden flower (tetraploid) 2Golden flower (tetraploid) 3Stem 1Stem 2Stem 3Leaf 1Leaf 2Leaf 3Juvenile bud 1Juvenile bud 2Juvenile bud 3Third green 1Third green 2Third green 3Second white 1Second white 2Second white 3Silver flowering 1Silver flowering 2Silver flowering 3Gold flowering 1Gold flowering 2Gold flowering 3Tawny withering 1Tawny withering 2Tawny withering 305101520253035404550Highcharts.com

Expression pattern detail

SRPSampleDescriptionTPM
SRP075780SRR3591705youngest leaf14.276
SRR3591706second leaf45.449
SRR3591707mature leaf29.509
SRR3591708Shoot apex26.231
SRR3591709Stem2.842
SRR3591710White floral bud6.756
SRR3591711White flower1.890
SRR3591712Green floral bud8.382
SRR3591713Yellow flower0.327
SRP173429 SRR8316895Juvenile bud stage 1.896
SRR8316896Juvenile bud stage 1.429
SRR8316897Juvenile bud stage 1.076
SRR8316894Third green stage 0.370
SRR8316900Third green stage 0.866
SRR8316901Third green stage 1.903
SRR8316898Complete white stage 0.711
SRR8316899Complete white stage 1.606
SRR8316903Complete white stage 0.892
SRR8316902Silver flowering stage0.237
SRR8316904Silver flowering stage1.500
SRR8316905Silver flowering stage0.000
SRR8316906Gold flowering stage 0.018
SRR8316907Gold flowering stage 0.512
SRR8316908Gold flowering stage 0.189
SRP132670SRR6706286Control9.039
SRR6706287Light intensity 50%6.189
SRR6706288Light intensity 20%4.941
CNP0000432CNS0095592Slightly white alabastrum(diploid) 10.875
CNS0095593Slightly white alabastrum(diploid) 21.329
CNS0095594Slightly white alabastrum(diploid) 30.583
CNS0095595Whole white alabastrum(diploid) 22.075
CNS0095596Whole white alabastrum(diploid) 31.744
CNS0095597Whole white alabastrum(diploid) 40.783
CNS0095598Silvery flower (diploied) 11.941
CNS0095599Silvery flower (diploied) 20.804
CNS0095600Silvery flower (diploied) 30.478
CNS0095601Golden flower (diploid) 10.362
CNS0095602Golden flower (diploid) 20.368
CNS0095603Golden flower (diploid) 30.290
CNS0095604Slightly white alabastrum(tetraploid) 10.652
CNS0095605Slightly white alabastrum(tetraploid) 21.168
CNS0095606Slightly white alabastrum(tetraploid) 31.467
CNS0095607Whole white alabastrum(tetraploid) 10.524
CNS0095608Whole white alabastrum(tetraploid) 20.085
CNS0095609Whole white alabastrum(tetraploid) 31.896
CNS0095610Silvery flower (tetraploid) 10.082
CNS0095611Silvery flower (tetraploid) 20.663
CNS0095612Silvery flower (tetraploid) 31.268
CNS0095613Golden flower (tetraploid) 10.069
CNS0095614Golden flower (tetraploid) 20.496
CNS0095615Golden flower (tetraploid) 30.547
CRA001975CRR073297Stem 18.434
CRR073298Stem 27.252
CRR073299Stem 39.954
CRR073300Leaf 19.039
CRR073301Leaf 26.947
CRR073302Leaf 37.379
CRR073303Juvenile bud 16.270
CRR073304Juvenile bud 27.230
CRR073305Juvenile bud 37.721
CRR073306Third green 14.024
CRR073307Third green 21.252
CRR073308Third green 31.414
CRR073309Second white 10.231
CRR073310Second white 20.269
CRR073311Second white 30.186
CRR073312Silver flowering 10.000
CRR073313Silver flowering 20.365
CRR073314Silver flowering 30.000
CRR073315Gold flowering 121.267
CRR073316Gold flowering 225.227
CRR073317Gold flowering 332.778
CRR073318Tawny withering 11.352
CRR073319Tawny withering 20.108
CRR073320Tawny withering 31.669