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Detail information of GWHGAAZE024197
Functional Annotation
Database
Orthologs
E value
Annotation
Nr
XP_002269025.3
0
PREDICTED: exocyst complex component SEC5A [Vitis vinifera]
Swissprot
tr|Q8S3U9|SEC5A_ARATH
0
Exocyst complex component SEC5A
trEMBL
tr|A0A067L6X1|A0A067L6X1_JATCU
0
Uncharacterized protein {ECO:0000313|EMBL:KDP42998.1}
TAIR10
AT1G76850.1
0
exocyst complex component sec5
Location And Transcript Sequence
(JBrowse)
Scaffold
Type
Start
End
Strand
GWHAAZE00000007
gene
37221048
37239141
+
GWHAAZE00000007
mRNA
37221048
37239141
+
GWHAAZE00000007
exon
37221048
37221266
+
GWHAAZE00000007
exon
37223332
37223480
+
GWHAAZE00000007
exon
37224873
37224961
+
GWHAAZE00000007
exon
37225922
37226116
+
GWHAAZE00000007
exon
37226597
37226724
+
GWHAAZE00000007
exon
37226809
37226967
+
GWHAAZE00000007
exon
37227224
37227328
+
GWHAAZE00000007
exon
37227630
37227704
+
GWHAAZE00000007
exon
37228047
37228184
+
GWHAAZE00000007
exon
37228299
37228484
+
GWHAAZE00000007
exon
37229037
37229180
+
GWHAAZE00000007
exon
37229673
37229799
+
GWHAAZE00000007
exon
37229964
37230090
+
GWHAAZE00000007
exon
37230825
37230940
+
GWHAAZE00000007
exon
37231039
37231273
+
GWHAAZE00000007
exon
37232058
37232151
+
GWHAAZE00000007
exon
37233822
37233899
+
GWHAAZE00000007
exon
37233986
37234042
+
GWHAAZE00000007
exon
37234693
37234842
+
GWHAAZE00000007
exon
37235617
37235832
+
GWHAAZE00000007
exon
37238914
37239141
+
GWHAAZE00000007
CDS
37221048
37221266
+
GWHAAZE00000007
CDS
37223332
37223480
+
GWHAAZE00000007
CDS
37224873
37224961
+
GWHAAZE00000007
CDS
37225922
37226116
+
GWHAAZE00000007
CDS
37226597
37226724
+
GWHAAZE00000007
CDS
37226809
37226967
+
GWHAAZE00000007
CDS
37227224
37227328
+
GWHAAZE00000007
CDS
37227630
37227704
+
GWHAAZE00000007
CDS
37228047
37228184
+
GWHAAZE00000007
CDS
37228299
37228484
+
GWHAAZE00000007
CDS
37229037
37229180
+
GWHAAZE00000007
CDS
37229673
37229799
+
GWHAAZE00000007
CDS
37229964
37230090
+
GWHAAZE00000007
CDS
37230825
37230940
+
GWHAAZE00000007
CDS
37231039
37231273
+
GWHAAZE00000007
CDS
37232058
37232151
+
GWHAAZE00000007
CDS
37233822
37233899
+
GWHAAZE00000007
CDS
37233986
37234042
+
GWHAAZE00000007
CDS
37234693
37234842
+
GWHAAZE00000007
CDS
37235617
37235832
+
GWHAAZE00000007
CDS
37238914
37239141
+
Transcript Sequence
>GWHTAAZE024231 ATGCAGAGGAATCAGCAGCAGAGGAGACCGGCGGTGGATGATGACGACGATTCCGACCTCGAGATGCTCAGTATATCCTCCGGCGATGAGGATAATGTCAAGGATCGAGGTGCCGGAGCGAAAAACAGAGCCGGCGGCGGTGGGAGAGGTGGTAGGGATGATGATAAGGCTTGGGATGGTGAGGAGCCTGATTGCTGGAAGCGAGTTGATGAAACTGAGCTTGGTCGTAGGGTTCGAGAGATGCGAGAGACAAAAACAGTTCCCGTTACTCAAAAGTTTGAGCGGAAGCCATCAGCAGTTAGAAAAGGGCTTAACAGTTTACTCTCCATCCCTCGTGGAATGGAATGTATAGACCCACTAGGATTGGGGATAATAGACAACAAAACGTTAAGGTTGATCAATGAGAATGCAACTTCTCCATCAAAGGACAAGGATTATCTAGATTCAGACCTTCGCGAGAAGTTGATGTATTTTTCGGAGAAATTTGATGCAAAATATTTCCTATCCCGAATACACCAAGATACAAGTGCCGCAGATTTGGAGGCTGGTGCTCTTGCAATAAAAACTGATCTTAAAGGACGGACTCAACAGAGAAAACAATTGGTCAAAGAAAATTTCGATTGCTTTGTCTCTTGCAAAACCACAATTGATGATATCGAGTCAAAATTGAAAAGGATCGAAGATGATCCTGAAGGTTCTGGAACCACTCAATTATTTAATTGTATTGAAGGGGTGACTTCGCTGGCGAATCGTGCTTGTGGATCTCTTTTTGAGAGGCAGTCCCAAGCTGAGAAGATTAGGTCGGTGCAAGGAATGCTTCAGAGGTTCCGTACGCTATTCAACCTGCCTAGTGCAATTCGTGGGAGCATTAGTAAGGGTGAATATGACTTGGCGGTCAGAGAGTACAGGAAAGCGAAATCGATCGTTCTGCCCTCTCATGTGGGAATACTAAAACGCGTTCTTGAGGAGGTTGAAAAAGTAATGCATGAGTTTAAAGGCATGCTTTACAAGTCCATGGATGATCCAACTATAGACCTAACAAATCTTGAAAATATTGTGAGGCTCTTGTTGGAGCTGGAACCCGATTCGGATCCTGTATGGCACTATTTAAATATACAGAATCACAGAATTCGAGGTTTGCTTGAAAAATGCACCTTAGATCATGAAACAAGGATGGAAAATTTGCAAAACGACATACGCGAAAAAGCCCTGTCTGATACAAAGTGGAGGCAAATGCAACAAGATTTGAATCAATCTTCCGATGTCGATTACTCTATTGATAGCATCAATTCACTGGGAGATTCACCACCAGAATATTTGACTGGTGAAGAAGTTGATGTTCTTAGAGGAAGGTATATTCGCAGATTAACTGCCGTACTTATCCATCACATTCCGGCCTTCTGGAGAGTAGCCCTTTCTGTTTTCAGTGGCAAATTTGCTAAGTCCTCCCAAGTTTCTGCTGAATCAAATGCCAATACTTCTGCTAATAAAACTGAGGAGAAAATGGGAGATGGGAAGTACTCTGCACATTCTCTTGATGAAGTTGCTGGAATGGTACGCAATACTATATCCGCCTATGAATCCAAGGTCCAAAGCACATTCCATGATCTTGAAGAATCAAATATTCTTCACCCATACATGAGTGATGCCATACGGGAAATATCTAAAGCATGCCAAGCTTTTGAAGCAAAAGAAGCTGCACCTCCAATCGCTGAAATAGCAAAAGATGAGTCATGGGTCCCTGTATCTGTTCTTGAAAGGAACAAGTCTCCGTATACAATCTCTTCCTTGCCTCTGGCATTCCGTTCAATTATAGGTTCAGCAATGGACCAGATTAGTTTGATGACTCAGTCTTTAAAGAGCGAGGCTACAAAGTCGGAAGATATGTTTGTGCAGTTTCAAGAAATTCAAGAATCTGTTAGACTTGCATTTTTGAACTGTTTGCTGGATTTTGCTGGTCATTTGGAGCAAATTGGAGGTGAGCTTGGCCAGACTAGATCAAATCAAGAAAGTCCATATTTCCAAAATGGGTATCATCTTGATCCGCAAGACAAATCATTTGATCCTCACCCTGAAAGTCTAGTTGATCCACATCAACAGCTGCTGATGGTCTTGAGTAATATTGGGTATTGCAAAGATGAACTTTCCCGTGAACTGTACCATAAATACAAAGCTATATGGCTGCAATCTAGGGGAAAAGATGAAGAGGAGAGTGATGTGCAAGATTTGGTTACGTCTTTCTCCGGTCTTGAAGAAAAGGTTCTTTCGCAATATACTATTGCAAAGGCTAATTCTATTAGAACAGCTGCCGTTAACTACTTGTTAGATGCTGGAGTTCAATGGGGAGGAGCACCTGCAGTCAAAGGTGTGCGGGATGCAGCTGTAGAATTATTGCACACTCTAGTAGCTGTGCATGCAGAGGTTTTCGCTGGTTGTAAGCCCCTGTTGGATAAGACACTTGGTATACTTGTTGAAGGTCTAATCGATACTTTGCTCAGCCTTTTCCATGAAAACAAAGAAAAAGATCTTAGGTCATTGGATACGAATGGTTTCTGTCAGATTATGCTTGAGCTTGAATATTTTGAGACGATATTGAATCCATATATTACATCTGATGCGAGCGAGTCCCTAAAGTCTTTACAAGGTGTACTACTGGAGAAAGCGACAGAGAGTGTGAGTGAGTCGATTGAGAGTCCAAGTCATAACCGCAGGGCAACACGTGGAAGTGATGATGTGCTTGCGGATGACAGACAGCATGGGATGACCGTGTCACCAGATGACCTTATTGCTCTTGCTCAGCAGTACAGCTCAGAGCTACTACAAGCAGAGCTGGAGAGGACCAGGATTAACACAGCGTGCTTTGTGGAGTCGATTCCGTTAGACTATTCAGTGCCAGAATCGGCCAAAGCAGCATATGCTTCTTTTAGAGGAACAGTCGAGTCTCCCAACAGGAAATTTAAAGGCTCTTCACAATCCGTCGGTTCACCTGGTTACTCTAGGCAACGCCGTAGATGA
Network for GWHGAAZE024197
Network category
Network
Top300 PCC genelist
Coexpression Positive
Network
Top300 PCC genelist
Coexpression Negative
Network
Top300 PCC genelist
Functional Module
Module ID
Function Annotation
Protein Structure
Pfam accession
Pfam name
Alignment start
Alignment end
E-value
PF15469.7
Sec5
196
373
3.90E-42
Protein Sequence
>GWHPAAZE024215 MQRNQQQRRPAVDDDDDSDLEMLSISSGDEDNVKDRGAGAKNRAGGGGRGGRDDDKAWDGEEPDCWKRVDETELGRRVREMRETKTVPVTQKFERKPSAVRKGLNSLLSIPRGMECIDPLGLGIIDNKTLRLINENATSPSKDKDYLDSDLREKLMYFSEKFDAKYFLSRIHQDTSAADLEAGALAIKTDLKGRTQQRKQLVKENFDCFVSCKTTIDDIESKLKRIEDDPEGSGTTQLFNCIEGVTSLANRACGSLFERQSQAEKIRSVQGMLQRFRTLFNLPSAIRGSISKGEYDLAVREYRKAKSIVLPSHVGILKRVLEEVEKVMHEFKGMLYKSMDDPTIDLTNLENIVRLLLELEPDSDPVWHYLNIQNHRIRGLLEKCTLDHETRMENLQNDIREKALSDTKWRQMQQDLNQSSDVDYSIDSINSLGDSPPEYLTGEEVDVLRGRYIRRLTAVLIHHIPAFWRVALSVFSGKFAKSSQVSAESNANTSANKTEEKMGDGKYSAHSLDEVAGMVRNTISAYESKVQSTFHDLEESNILHPYMSDAIREISKACQAFEAKEAAPPIAEIAKDESWVPVSVLERNKSPYTISSLPLAFRSIIGSAMDQISLMTQSLKSEATKSEDMFVQFQEIQESVRLAFLNCLLDFAGHLEQIGGELGQTRSNQESPYFQNGYHLDPQDKSFDPHPESLVDPHQQLLMVLSNIGYCKDELSRELYHKYKAIWLQSRGKDEEESDVQDLVTSFSGLEEKVLSQYTIAKANSIRTAAVNYLLDAGVQWGGAPAVKGVRDAAVELLHTLVAVHAEVFAGCKPLLDKTLGILVEGLIDTLLSLFHENKEKDLRSLDTNGFCQIMLELEYFETILNPYITSDASESLKSLQGVLLEKATESVSESIESPSHNRRATRGSDDVLADDRQHGMTVSPDDLIALAQQYSSELLQAELERTRINTACFVESIPLDYSVPESAKAAYASFRGTVESPNRKFKGSSQSVGSPGYSRQRRR
Gene family
Gene family
subfamily
--
--
KEGG pathway
KO
Enzyme
pathway
mapID
K17637
EXOC2, SEC5
Ras signaling pathway
map04014
Gene Ontology
GO term
Ontology
Name
Expression pattern
Expression pattern detail
SRP
Sample
Description
TPM
SRP075780
SRR3591705
youngest leaf
70.789
SRR3591706
second leaf
34.049
SRR3591707
mature leaf
32.591
SRR3591708
Shoot apex
46.493
SRR3591709
Stem
54.335
SRR3591710
White floral bud
38.060
SRR3591711
White flower
41.825
SRR3591712
Green floral bud
50.285
SRR3591713
Yellow flower
39.933
SRP173429
SRR8316895
Juvenile bud stage
29.417
SRR8316896
Juvenile bud stage
44.681
SRR8316897
Juvenile bud stage
21.207
SRR8316894
Third green stage
19.344
SRR8316900
Third green stage
47.845
SRR8316901
Third green stage
46.136
SRR8316898
Complete white stage
16.256
SRR8316899
Complete white stage
54.440
SRR8316903
Complete white stage
29.884
SRR8316902
Silver flowering stage
16.251
SRR8316904
Silver flowering stage
29.516
SRR8316905
Silver flowering stage
13.241
SRR8316906
Gold flowering stage
41.856
SRR8316907
Gold flowering stage
40.133
SRR8316908
Gold flowering stage
46.582
SRP132670
SRR6706286
Control
23.637
SRR6706287
Light intensity 50%
23.428
SRR6706288
Light intensity 20%
27.088
CNP0000432
CNS0095592
Slightly white alabastrum(diploid) 1
27.680
CNS0095593
Slightly white alabastrum(diploid) 2
29.604
CNS0095594
Slightly white alabastrum(diploid) 3
26.791
CNS0095595
Whole white alabastrum(diploid) 2
26.924
CNS0095596
Whole white alabastrum(diploid) 3
26.428
CNS0095597
Whole white alabastrum(diploid) 4
27.410
CNS0095598
Silvery flower (diploied) 1
30.204
CNS0095599
Silvery flower (diploied) 2
28.593
CNS0095600
Silvery flower (diploied) 3
42.096
CNS0095601
Golden flower (diploid) 1
25.435
CNS0095602
Golden flower (diploid) 2
44.135
CNS0095603
Golden flower (diploid) 3
42.565
CNS0095604
Slightly white alabastrum(tetraploid) 1
40.434
CNS0095605
Slightly white alabastrum(tetraploid) 2
30.094
CNS0095606
Slightly white alabastrum(tetraploid) 3
62.704
CNS0095607
Whole white alabastrum(tetraploid) 1
26.866
CNS0095608
Whole white alabastrum(tetraploid) 2
27.153
CNS0095609
Whole white alabastrum(tetraploid) 3
47.879
CNS0095610
Silvery flower (tetraploid) 1
45.669
CNS0095611
Silvery flower (tetraploid) 2
40.179
CNS0095612
Silvery flower (tetraploid) 3
44.094
CNS0095613
Golden flower (tetraploid) 1
23.723
CNS0095614
Golden flower (tetraploid) 2
38.636
CNS0095615
Golden flower (tetraploid) 3
37.448
CRA001975
CRR073297
Stem 1
38.125
CRR073298
Stem 2
36.622
CRR073299
Stem 3
31.350
CRR073300
Leaf 1
39.486
CRR073301
Leaf 2
34.692
CRR073302
Leaf 3
30.398
CRR073303
Juvenile bud 1
36.231
CRR073304
Juvenile bud 2
22.371
CRR073305
Juvenile bud 3
38.839
CRR073306
Third green 1
20.582
CRR073307
Third green 2
18.194
CRR073308
Third green 3
21.061
CRR073309
Second white 1
15.669
CRR073310
Second white 2
23.214
CRR073311
Second white 3
21.752
CRR073312
Silver flowering 1
18.056
CRR073313
Silver flowering 2
21.888
CRR073314
Silver flowering 3
21.584
CRR073315
Gold flowering 1
15.835
CRR073316
Gold flowering 2
30.372
CRR073317
Gold flowering 3
13.225
CRR073318
Tawny withering 1
45.694
CRR073319
Tawny withering 2
39.237
CRR073320
Tawny withering 3
44.002