Gene detail

Detail information of GWHGAAZE024196

Functional Annotation

Database	Orthologs	E value	Annotation
Nr	XP_006434447.1	0	hypothetical protein CICLE_v10001734mg [Citrus clementina]
COG	YP_006527806.1	1E-108	Fructose-1,6-bisphosphatase
Swissprot	tr\|P46276\|F16P2_SOLTU	0	Fructose-1,6-bisphosphatase, cytosolic
trEMBL	tr\|V4T3G2\|V4T3G2_9ROSI	0	Uncharacterized protein {ECO:0000313\|EMBL:ESR47687.1}
TAIR10	AT1G43670.1	1E-177	Inositol monophosphatase family protein

Location And Transcript Sequence (JBrowse)

Scaffold	Type	Start	End	Strand
GWHAAZE00000007	gene	37195438	37201705	+
GWHAAZE00000007	mRNA	37195438	37201705	+
GWHAAZE00000007	exon	37195438	37195596	+
GWHAAZE00000007	exon	37197218	37197259	+
GWHAAZE00000007	exon	37197384	37197458	+
GWHAAZE00000007	exon	37197547	37197608	+
GWHAAZE00000007	exon	37198146	37198212	+
GWHAAZE00000007	exon	37198382	37198495	+
GWHAAZE00000007	exon	37198686	37198772	+
GWHAAZE00000007	exon	37199278	37199414	+
GWHAAZE00000007	exon	37199972	37200058	+
GWHAAZE00000007	exon	37200164	37200239	+
GWHAAZE00000007	exon	37201592	37201705	+
GWHAAZE00000007	CDS	37195438	37195596	+
GWHAAZE00000007	CDS	37197218	37197259	+
GWHAAZE00000007	CDS	37197384	37197458	+
GWHAAZE00000007	CDS	37197547	37197608	+
GWHAAZE00000007	CDS	37198146	37198212	+
GWHAAZE00000007	CDS	37198382	37198495	+
GWHAAZE00000007	CDS	37198686	37198772	+
GWHAAZE00000007	CDS	37199278	37199414	+
GWHAAZE00000007	CDS	37199972	37200058	+
GWHAAZE00000007	CDS	37200164	37200239	+
GWHAAZE00000007	CDS	37201592	37201705	+

Transcript Sequence
>GWHTAAZE024230 ATGGATCACCAGGCAGATGCATTCAGGACGGATTTGATGACAATAACAAGGTTTGTGCTGAACGAGCAATCCAAATACCCTGAATCTCGTGGAGATTTCTCCATTTTGCTCAGCCACATTGTTCTCGGTTGCAAGTTCGTTTGTTCTGCTGTTAACAAGGCGGGTCTGGCCAAGCTCATTGGACTTGCTGGTGAGACCAATGGTGAAGAGCAAAAGAAATTGGATGTTCTATCAAATGAAGTTTTTGTCAAGGCTCTTGTCAGCAGTGGTCGAACATGCATCCTTGTCTCTGAGGAGGATGAAGAAGCAACATTTGTGGAAACATCTAACCGCGGAAGGTATTGTGTGGTTTTTGATCCACTGGATGGATCCTCTAACATTGACTGTGGTGTTTCCATTGGAACTATCTTTGGGATTTATATGATAACAGATGGGGGTGAACCATCTTTAGATGACGTGTTGAAACCTGGGAACGATATGGTTGCTGCTGGCTATTGCATGTATGGAAGCTCTTGCACGTTTGTGTTGAGCACTGGATCAGGTGTTAATGGGTTTACTCTTGATCCATCTCTAGGGGAGTTCATACTCACTCACCCAGACATTAAGATTCCAAAGAAAGGGAAAATATATTCTGTGAACGAAGGAAATGCCAAGAACTGGGATTCTCCTACAGCTGCGTATGTGGAAAAATGCAAGTTCCCCAAAGACGGGTCGTCGCCAAAATCTCTGAGATACATTGGGAGCATGGTAGCTGATGTCCATCGAACGTTACTATATGGGGGTATATTTTTGTACCCTGCTGATAAGAAGAGCCCCAGTGGAAAACTTCGGGTTCTCTATGAAGTCTTCCCAATGTCTTTTTTGATGGAACAAGCTGGAGGCCAAGCATTTACCGGCAAGGAACGGGCACTTGACTTGGTTCCAAAGAAGATACATGAGAGGTCTCCAATATTTCTTGGTAGCTATGATGATGTTGAGGAAATCAAAGCACTCTATGCTGCCGAAGAGAAAAAGGGATGA

Network for GWHGAAZE024196

Network category	Network	Top300 PCC genelist
Coexpression Positive	Network	Top300 PCC genelist
Coexpression Negative	Network	Top300 PCC genelist

Functional Module

Module ID	Function Annotation

Protein Structure

Pfam accession	Pfam name	Alignment start	Alignment end	E-value
PF00316.21	FBPase	13	199	1.30E-77
PF18913.1	FBPase_C	203	332	1.10E-60

Protein Sequence

Gene family

Gene family	subfamily
Transcription Factors Family	C3H

KEGG pathway

KO	Enzyme	pathway	mapID
K03841	FBP, fbp	Metabolic pathways	map01100
		Biosynthesis of secondary metabolites	map01110
		Microbial metabolism in diverse environments	map01120
		Carbon metabolism	map01200
		Glycolysis / Gluconeogenesis	map00010
		Pentose phosphate pathway	map00030
		Fructose and mannose metabolism	map00051
		Carbon fixation in photosynthetic organisms	map00710
		Methane metabolism	map00680
		AMPK signaling pathway	map04152
		Insulin signaling pathway	map04910
		Glucagon signaling pathway	map04922

Gene Ontology

GO term	Ontology	Name
GO:0005975	biological_process	carbohydrate metabolic process
GO:0042132	molecular_function	fructose 1,6-bisphosphate 1-phosphatase activity
GO:0042578	molecular_function	phosphoric ester hydrolase activity
GO:0016791	molecular_function	phosphatase activity

Expression pattern

Expression pattern detail

SRP	Sample	Description	TPM
SRP075780	SRR3591705	youngest leaf	26.815
	SRR3591706	second leaf	299.113
	SRR3591707	mature leaf	291.574
	SRR3591708	Shoot apex	39.978
	SRR3591709	Stem	27.346
	SRR3591710	White floral bud	3.161
	SRR3591711	White flower	3.709
	SRR3591712	Green floral bud	2.246
	SRR3591713	Yellow flower	0.558
SRP173429	SRR8316895	Juvenile bud stage	13.219
	SRR8316896	Juvenile bud stage	15.061
	SRR8316897	Juvenile bud stage	10.168
	SRR8316894	Third green stage	4.336
	SRR8316900	Third green stage	5.684
	SRR8316901	Third green stage	6.365
	SRR8316898	Complete white stage	0.747
	SRR8316899	Complete white stage	3.417
	SRR8316903	Complete white stage	2.035
	SRR8316902	Silver flowering stage	0.523
	SRR8316904	Silver flowering stage	0.376
	SRR8316905	Silver flowering stage	0.036
	SRR8316906	Gold flowering stage	0.050
	SRR8316907	Gold flowering stage	0.273
	SRR8316908	Gold flowering stage	0.118
SRP132670	SRR6706286	Control	5.662
	SRR6706287	Light intensity 50%	4.545
	SRR6706288	Light intensity 20%	4.720
CNP0000432	CNS0095592	Slightly white alabastrum(diploid) 1	8.018
	CNS0095593	Slightly white alabastrum(diploid) 2	6.478
	CNS0095594	Slightly white alabastrum(diploid) 3	10.382
	CNS0095595	Whole white alabastrum(diploid) 2	6.398
	CNS0095596	Whole white alabastrum(diploid) 3	6.348
	CNS0095597	Whole white alabastrum(diploid) 4	5.544
	CNS0095598	Silvery flower (diploied) 1	13.340
	CNS0095599	Silvery flower (diploied) 2	19.768
	CNS0095600	Silvery flower (diploied) 3	3.931
	CNS0095601	Golden flower (diploid) 1	26.274
	CNS0095602	Golden flower (diploid) 2	13.059
	CNS0095603	Golden flower (diploid) 3	12.845
	CNS0095604	Slightly white alabastrum(tetraploid) 1	8.187
	CNS0095605	Slightly white alabastrum(tetraploid) 2	9.142
	CNS0095606	Slightly white alabastrum(tetraploid) 3	5.465
	CNS0095607	Whole white alabastrum(tetraploid) 1	6.724
	CNS0095608	Whole white alabastrum(tetraploid) 2	5.203
	CNS0095609	Whole white alabastrum(tetraploid) 3	5.189
	CNS0095610	Silvery flower (tetraploid) 1	1.238
	CNS0095611	Silvery flower (tetraploid) 2	1.411
	CNS0095612	Silvery flower (tetraploid) 3	0.562
	CNS0095613	Golden flower (tetraploid) 1	1.321
	CNS0095614	Golden flower (tetraploid) 2	1.020
	CNS0095615	Golden flower (tetraploid) 3	0.379
CRA001975	CRR073297	Stem 1	24.791
	CRR073298	Stem 2	17.568
	CRR073299	Stem 3	20.985
	CRR073300	Leaf 1	3.923
	CRR073301	Leaf 2	4.546
	CRR073302	Leaf 3	3.443
	CRR073303	Juvenile bud 1	3.205
	CRR073304	Juvenile bud 2	1.115
	CRR073305	Juvenile bud 3	3.634
	CRR073306	Third green 1	0.160
	CRR073307	Third green 2	0.318
	CRR073308	Third green 3	0.353
	CRR073309	Second white 1	0.000
	CRR073310	Second white 2	0.544
	CRR073311	Second white 3	0.176
	CRR073312	Silver flowering 1	0.167
	CRR073313	Silver flowering 2	0.455
	CRR073314	Silver flowering 3	0.146
	CRR073315	Gold flowering 1	333.458
	CRR073316	Gold flowering 2	354.781
	CRR073317	Gold flowering 3	262.092
	CRR073318	Tawny withering 1	8.402
	CRR073319	Tawny withering 2	14.502
	CRR073320	Tawny withering 3	10.322