Detail information of GWHGAAZE024187


Functional Annotation

DatabaseOrthologsE valueAnnotation
NrXP_010664983.10PREDICTED: serine/threonine-protein kinase HT1-like isoform X2 [Vitis vinifera]
COGYP_001958461.17E-37hypothetical protein Aasi_1443
Swissprottr|Q2MHE4|HT1_ARATH5E-75Serine/threonine-protein kinase HT1
trEMBLtr|D7TYD1|D7TYD1_VITVI0Putative uncharacterized protein {ECO:0000313|EMBL:CBI35506.3}
TAIR10AT4G38470.12E-148ACT-like protein tyrosine kinase family protein

Location And Transcript Sequence (JBrowse)

ScaffoldTypeStartEndStrand
GWHAAZE00000007gene3701641537034164-
GWHAAZE00000007mRNA3701641537034164-
GWHAAZE00000007exon3703398337034164-
GWHAAZE00000007exon3703293137033045-
GWHAAZE00000007exon3702933537029441-
GWHAAZE00000007exon3702904637029168-
GWHAAZE00000007exon3702657437026646-
GWHAAZE00000007exon3702601437026124-
GWHAAZE00000007exon3702557137025621-
GWHAAZE00000007exon3702272337022865-
GWHAAZE00000007exon3702251337022620-
GWHAAZE00000007exon3702193137022004-
GWHAAZE00000007exon3702098037021155-
GWHAAZE00000007exon3701914837019243-
GWHAAZE00000007exon3701887637018956-
GWHAAZE00000007exon3701866037018710-
GWHAAZE00000007exon3701745337017593-
GWHAAZE00000007exon3701641537016444-
GWHAAZE00000007CDS3703398337034164-
GWHAAZE00000007CDS3703293137033045-
GWHAAZE00000007CDS3702933537029441-
GWHAAZE00000007CDS3702904637029168-
GWHAAZE00000007CDS3702657437026646-
GWHAAZE00000007CDS3702601437026124-
GWHAAZE00000007CDS3702557137025621-
GWHAAZE00000007CDS3702272337022865-
GWHAAZE00000007CDS3702251337022620-
GWHAAZE00000007CDS3702193137022004-
GWHAAZE00000007CDS3702098037021155-
GWHAAZE00000007CDS3701914837019243-
GWHAAZE00000007CDS3701887637018956-
GWHAAZE00000007CDS3701866037018710-
GWHAAZE00000007CDS3701745337017593-
GWHAAZE00000007CDS3701641537016444-
Transcript Sequence

Network for GWHGAAZE024187

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist


Functional Module

Module IDFunction Annotation


Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF07714.18PK_Tyr_Ser-Thr2885342.00E-73
Protein Sequence

Gene family

Gene familysubfamily
Protein Kinases FamilyTKL-Pl-4

KEGG pathway

KO Enzyme pathway mapID
--------

Gene Ontology

GO term OntologyName
GO:0006468biological_processprotein phosphorylation
GO:0004672molecular_functionprotein kinase activity
GO:0005524molecular_functionATP binding

Expression pattern


Expression pattern detail

SRPSampleDescriptionTPM
SRP075780SRR3591705youngest leaf13.861
SRR3591706second leaf6.349
SRR3591707mature leaf6.973
SRR3591708Shoot apex10.302
SRR3591709Stem14.683
SRR3591710White floral bud15.927
SRR3591711White flower14.660
SRR3591712Green floral bud12.097
SRR3591713Yellow flower14.842
SRP173429 SRR8316895Juvenile bud stage 10.390
SRR8316896Juvenile bud stage 9.821
SRR8316897Juvenile bud stage 6.494
SRR8316894Third green stage 3.788
SRR8316900Third green stage 12.772
SRR8316901Third green stage 9.508
SRR8316898Complete white stage 5.295
SRR8316899Complete white stage 15.924
SRR8316903Complete white stage 10.958
SRR8316902Silver flowering stage4.634
SRR8316904Silver flowering stage7.255
SRR8316905Silver flowering stage2.287
SRR8316906Gold flowering stage 10.308
SRR8316907Gold flowering stage 7.380
SRR8316908Gold flowering stage 9.382
SRP132670SRR6706286Control8.085
SRR6706287Light intensity 50%7.846
SRR6706288Light intensity 20%8.632
CNP0000432CNS0095592Slightly white alabastrum(diploid) 15.299
CNS0095593Slightly white alabastrum(diploid) 25.265
CNS0095594Slightly white alabastrum(diploid) 35.477
CNS0095595Whole white alabastrum(diploid) 24.779
CNS0095596Whole white alabastrum(diploid) 34.195
CNS0095597Whole white alabastrum(diploid) 45.304
CNS0095598Silvery flower (diploied) 112.043
CNS0095599Silvery flower (diploied) 28.159
CNS0095600Silvery flower (diploied) 313.377
CNS0095601Golden flower (diploid) 19.752
CNS0095602Golden flower (diploid) 212.038
CNS0095603Golden flower (diploid) 312.250
CNS0095604Slightly white alabastrum(tetraploid) 16.404
CNS0095605Slightly white alabastrum(tetraploid) 25.925
CNS0095606Slightly white alabastrum(tetraploid) 314.459
CNS0095607Whole white alabastrum(tetraploid) 15.624
CNS0095608Whole white alabastrum(tetraploid) 22.634
CNS0095609Whole white alabastrum(tetraploid) 38.827
CNS0095610Silvery flower (tetraploid) 116.009
CNS0095611Silvery flower (tetraploid) 215.253
CNS0095612Silvery flower (tetraploid) 312.688
CNS0095613Golden flower (tetraploid) 15.999
CNS0095614Golden flower (tetraploid) 215.405
CNS0095615Golden flower (tetraploid) 36.465
CRA001975CRR073297Stem 112.661
CRR073298Stem 211.429
CRR073299Stem 310.112
CRR073300Leaf 112.959
CRR073301Leaf 212.032
CRR073302Leaf 311.325
CRR073303Juvenile bud 16.617
CRR073304Juvenile bud 27.983
CRR073305Juvenile bud 38.427
CRR073306Third green 13.987
CRR073307Third green 23.993
CRR073308Third green 35.247
CRR073309Second white 13.339
CRR073310Second white 23.655
CRR073311Second white 32.865
CRR073312Silver flowering 13.524
CRR073313Silver flowering 22.966
CRR073314Silver flowering 34.160
CRR073315Gold flowering 15.470
CRR073316Gold flowering 28.876
CRR073317Gold flowering 35.514
CRR073318Tawny withering 114.889
CRR073319Tawny withering 212.436
CRR073320Tawny withering 317.818