Detail information of GWHGAAZE024177


Functional Annotation

DatabaseOrthologsE valueAnnotation
NrCBI35491.33.22506E-42unnamed protein product [Vitis vinifera]
trEMBLtr|A0A061FH83|A0A061FH83_THECC3E-40VQ motif-containing protein, putative {ECO:0000313|EMBL:EOY16660.1}

Location And Transcript Sequence (JBrowse)

ScaffoldTypeStartEndStrand
GWHAAZE00000007gene3672318336723590+
GWHAAZE00000007mRNA3672318336723590+
GWHAAZE00000007exon3672318336723590+
GWHAAZE00000007CDS3672318336723590+
Transcript Sequence

Network for GWHGAAZE024177

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist


Functional Module

Module IDFunction Annotation


Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
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Protein Sequence

Gene family

Gene familysubfamily
----

KEGG pathway

KO Enzyme pathway mapID
K20725MKS1 MAPK signaling pathway - plant map04016

Gene Ontology

GO term OntologyName

Expression pattern


Expression pattern detail

SRPSampleDescriptionTPM
SRP075780SRR3591705youngest leaf0.000
SRR3591706second leaf0.000
SRR3591707mature leaf2.053
SRR3591708Shoot apex0.000
SRR3591709Stem0.190
SRR3591710White floral bud1.979
SRR3591711White flower0.723
SRR3591712Green floral bud0.133
SRR3591713Yellow flower0.290
SRP173429 SRR8316895Juvenile bud stage 0.173
SRR8316896Juvenile bud stage 0.333
SRR8316897Juvenile bud stage 0.000
SRR8316894Third green stage 0.003
SRR8316900Third green stage 0.000
SRR8316901Third green stage 0.171
SRR8316898Complete white stage 0.170
SRR8316899Complete white stage 0.000
SRR8316903Complete white stage 0.000
SRR8316902Silver flowering stage0.000
SRR8316904Silver flowering stage0.080
SRR8316905Silver flowering stage0.176
SRR8316906Gold flowering stage 0.478
SRR8316907Gold flowering stage 0.238
SRR8316908Gold flowering stage 0.756
SRP132670SRR6706286Control0.051
SRR6706287Light intensity 50%0.000
SRR6706288Light intensity 20%0.028
CNP0000432CNS0095592Slightly white alabastrum(diploid) 10.000
CNS0095593Slightly white alabastrum(diploid) 20.120
CNS0095594Slightly white alabastrum(diploid) 30.000
CNS0095595Whole white alabastrum(diploid) 20.000
CNS0095596Whole white alabastrum(diploid) 30.000
CNS0095597Whole white alabastrum(diploid) 40.000
CNS0095598Silvery flower (diploied) 10.000
CNS0095599Silvery flower (diploied) 20.000
CNS0095600Silvery flower (diploied) 30.000
CNS0095601Golden flower (diploid) 10.000
CNS0095602Golden flower (diploid) 20.574
CNS0095603Golden flower (diploid) 30.488
CNS0095604Slightly white alabastrum(tetraploid) 10.084
CNS0095605Slightly white alabastrum(tetraploid) 20.162
CNS0095606Slightly white alabastrum(tetraploid) 30.000
CNS0095607Whole white alabastrum(tetraploid) 10.000
CNS0095608Whole white alabastrum(tetraploid) 20.000
CNS0095609Whole white alabastrum(tetraploid) 30.000
CNS0095610Silvery flower (tetraploid) 10.446
CNS0095611Silvery flower (tetraploid) 20.000
CNS0095612Silvery flower (tetraploid) 30.368
CNS0095613Golden flower (tetraploid) 11.352
CNS0095614Golden flower (tetraploid) 20.591
CNS0095615Golden flower (tetraploid) 30.036
CRA001975CRR073297Stem 10.000
CRR073298Stem 20.000
CRR073299Stem 30.000
CRR073300Leaf 10.000
CRR073301Leaf 20.000
CRR073302Leaf 30.000
CRR073303Juvenile bud 10.000
CRR073304Juvenile bud 20.000
CRR073305Juvenile bud 30.000
CRR073306Third green 10.000
CRR073307Third green 20.362
CRR073308Third green 30.146
CRR073309Second white 10.000
CRR073310Second white 20.000
CRR073311Second white 30.000
CRR073312Silver flowering 10.750
CRR073313Silver flowering 20.133
CRR073314Silver flowering 30.384
CRR073315Gold flowering 10.000
CRR073316Gold flowering 20.000
CRR073317Gold flowering 30.000
CRR073318Tawny withering 10.042
CRR073319Tawny withering 20.426
CRR073320Tawny withering 30.000