Detail information of GWHGAAZE024066


Functional Annotation

DatabaseOrthologsE valueAnnotation
NrXP_002285860.10PREDICTED: BTB/POZ domain-containing protein At1g21780 isoform X2 [Vitis vinifera]
Swissprottr|Q9XHZ8|Y1178_ARATH0BTB/POZ domain-containing protein At1g21780
trEMBLtr|E0CR58|E0CR58_VITVI0Putative uncharacterized protein {ECO:0000313|EMBL:CBI19012.3}
TAIR10AT1G21780.22E-147BTB/POZ domain-containing protein

Location And Transcript Sequence (JBrowse)

ScaffoldTypeStartEndStrand
GWHAAZE00000007gene3419618634200899-
GWHAAZE00000007mRNA3419618634200899-
GWHAAZE00000007exon3420078734200899-
GWHAAZE00000007exon3420012634200271-
GWHAAZE00000007exon3419824134198356-
GWHAAZE00000007exon3419618634196791-
GWHAAZE00000007CDS3420078734200899-
GWHAAZE00000007CDS3420012634200271-
GWHAAZE00000007CDS3419824134198356-
GWHAAZE00000007CDS3419618634196791-
Transcript Sequence

Network for GWHGAAZE024066

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist


Functional Module

Module IDFunction Annotation


Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF00651.32BTB1532572.80E-24
Protein Sequence

Gene family

Gene familysubfamily
Transcription Factors FamilyTRAF
Ubiquitin Family3-box

KEGG pathway

KO Enzyme pathway mapID
K10523SPOP Hedgehog signaling pathway map04340
Hedgehog signaling pathway - flymap04341

Gene Ontology

GO term OntologyName
GO:0005515molecular_functionprotein binding

Expression pattern


Expression pattern detail

SRPSampleDescriptionTPM
SRP075780SRR3591705youngest leaf28.525
SRR3591706second leaf13.161
SRR3591707mature leaf16.932
SRR3591708Shoot apex22.119
SRR3591709Stem39.519
SRR3591710White floral bud49.793
SRR3591711White flower47.806
SRR3591712Green floral bud43.142
SRR3591713Yellow flower25.268
SRP173429 SRR8316895Juvenile bud stage 19.435
SRR8316896Juvenile bud stage 34.069
SRR8316897Juvenile bud stage 11.111
SRR8316894Third green stage 13.022
SRR8316900Third green stage 48.220
SRR8316901Third green stage 41.002
SRR8316898Complete white stage 22.807
SRR8316899Complete white stage 76.608
SRR8316903Complete white stage 26.503
SRR8316902Silver flowering stage20.202
SRR8316904Silver flowering stage26.247
SRR8316905Silver flowering stage15.627
SRR8316906Gold flowering stage 45.686
SRR8316907Gold flowering stage 34.928
SRR8316908Gold flowering stage 42.327
SRP132670SRR6706286Control37.581
SRR6706287Light intensity 50%37.973
SRR6706288Light intensity 20%40.240
CNP0000432CNS0095592Slightly white alabastrum(diploid) 124.681
CNS0095593Slightly white alabastrum(diploid) 225.582
CNS0095594Slightly white alabastrum(diploid) 322.342
CNS0095595Whole white alabastrum(diploid) 224.804
CNS0095596Whole white alabastrum(diploid) 321.552
CNS0095597Whole white alabastrum(diploid) 425.240
CNS0095598Silvery flower (diploied) 126.797
CNS0095599Silvery flower (diploied) 228.481
CNS0095600Silvery flower (diploied) 346.907
CNS0095601Golden flower (diploid) 129.867
CNS0095602Golden flower (diploid) 236.245
CNS0095603Golden flower (diploid) 338.071
CNS0095604Slightly white alabastrum(tetraploid) 132.107
CNS0095605Slightly white alabastrum(tetraploid) 228.626
CNS0095606Slightly white alabastrum(tetraploid) 345.916
CNS0095607Whole white alabastrum(tetraploid) 123.862
CNS0095608Whole white alabastrum(tetraploid) 223.520
CNS0095609Whole white alabastrum(tetraploid) 348.113
CNS0095610Silvery flower (tetraploid) 149.522
CNS0095611Silvery flower (tetraploid) 266.364
CNS0095612Silvery flower (tetraploid) 357.257
CNS0095613Golden flower (tetraploid) 132.876
CNS0095614Golden flower (tetraploid) 233.744
CNS0095615Golden flower (tetraploid) 349.563
CRA001975CRR073297Stem 143.140
CRR073298Stem 250.833
CRR073299Stem 362.522
CRR073300Leaf 156.964
CRR073301Leaf 259.290
CRR073302Leaf 363.716
CRR073303Juvenile bud 171.819
CRR073304Juvenile bud 281.277
CRR073305Juvenile bud 379.655
CRR073306Third green 137.693
CRR073307Third green 238.317
CRR073308Third green 338.320
CRR073309Second white 137.446
CRR073310Second white 236.507
CRR073311Second white 327.842
CRR073312Silver flowering 133.006
CRR073313Silver flowering 225.274
CRR073314Silver flowering 322.187
CRR073315Gold flowering 119.375
CRR073316Gold flowering 220.563
CRR073317Gold flowering 319.889
CRR073318Tawny withering 145.992
CRR073319Tawny withering 222.498
CRR073320Tawny withering 346.712