Gene detail

Detail information of GWHGAAZE024043

Functional Annotation

Database	Orthologs	E value	Annotation
Nr	XP_011074859.1	0	PREDICTED: aminoacylase-1 [Sesamum indicum]
COG	YP_004406304.1	1E-21	hypothetical protein VAB18032_23020
trEMBL	tr\|F6H0T0\|F6H0T0_VITVI	0	Aminoacylase-1 {ECO:0000256\|PIRNR:PIRNR036696}
TAIR10	AT1G44820.1	3E-151	Peptidase M20/M25/M40 family protein

Location And Transcript Sequence (JBrowse)

Scaffold	Type	Start	End	Strand
GWHAAZE00000007	gene	33804982	33809584	-
GWHAAZE00000007	mRNA	33804982	33809584	-
GWHAAZE00000007	exon	33804982	33805227	-
GWHAAZE00000007	exon	33806404	33806541	-
GWHAAZE00000007	exon	33807971	33808375	-
GWHAAZE00000007	exon	33809192	33809584	-
GWHAAZE00000007	CDS	33809192	33809584	-
GWHAAZE00000007	CDS	33807971	33808375	-
GWHAAZE00000007	CDS	33806404	33806541	-
GWHAAZE00000007	CDS	33804982	33805227	-

Transcript Sequence
>GWHTAAZE024077 ATGTCCAACTACCTCCTCTCCCACTTCTCACTCCTCTTCTTCTTCTTCTCTCTCTCCATTCCCTATTCTCTCTCAGAATCCACACCCATTTCTCGTTTCCAAAACTACCTCCGAATTAACACCGCCCACCCAAACCCTAACTACGCCGCCGCAATCGCCTTCCTCACTGCCCAATCTCAGTCTATTTCAGGCCTTAAAACCCAAATCCTAGATCCCTCATCCCGCAACAAGTCCCTCCTCATCCTCACCCTTCCTGGCACAAACCCTGATTTACCATCAATTCTCTTCAATTCTCACCTTGATTCCGTCCCTGCTGAGCCCGATAAATGGTTCCACCACCCTTTTGCTGCTGTTCGAACAGATGGAGGCCAAATATTTGCCCGAGGTTCACAGGAAAATTCCAATTTCAAGCCCCTTAGGACAATTCATGTTTTGTATGTGCCTGATGAGGAAATTGGGGGATGTGATGGGATGGCTAAGTTTGTGGAGTCAAAGGAATTTGAGGAATTAAATGTAGGGTTTGTGTTGGATGAGGGCCAGGCTTCGACAAGTGATGAATTTAGGGTTTTCTATGCAGATAGGTCGCCATGGAATTTAGTTATCAAGGCAAGTGGAATGCCAGGGCATGGGTCAAGGATGTTTGATAATAGTGCAATGGAGAACTTGATGAAAAGTGTTGAGGTTATTAACAAGTTTAGGGAGAATCAATTTGATGTGGTTAAGGCTGGATGGGCTACTAATTCGGAAGTGATTTCGGTGAATCCTGTGTATTTAAAAGCAGGGTTTCCTTCACCTACTGGGTTTGTGATGAACATGCAACCATCCGAGGCAGAAGCTGGATTTGATGTTCGATTAACACCAACAACAGACCCGGATCTCTTAAAGAAAAGAATTGCTGATGAGTGGGCACCAGCTACTAGAAATATGACATATGAGGTGACTGAGAAAGGACCTTTAAGGGATTGTCTTGGGCGCCCTCTAGTGACAGCAACAAATGAGTCCAACCCATGGTGGTCGGTTTTCAAGCAAGCAATCTCCTCCGCCGGTGGAAAACTTGCAAAGCCTGAAATCTTAGCATCAACCACTGATGCTCGATTTATGAGGCAGAAGGGAATCCCTACTCTCGGTTTCTCCCCTATGAAAAACACTCCCATCTTACTTCATGATCATAATGAGGTATGA

Network for GWHGAAZE024043

Network category	Network	Top300 PCC genelist
Coexpression Positive	Network	Top300 PCC genelist
Coexpression Negative	Network	Top300 PCC genelist

Functional Module

Module ID	Function Annotation

Protein Structure

Pfam accession	Pfam name	Alignment start	Alignment end	E-value
PF01546.29	Peptidase_M20	95	392	8.70E-17
PF07687.15	M20_dimer	197	301	1.30E-05

Protein Sequence

Gene family

Gene family	subfamily
--	--

KEGG pathway

KO	Enzyme	pathway	mapID
K14677	ACY1	Metabolic pathways	map01100
		Biosynthesis of secondary metabolites	map01110
		2-Oxocarboxylic acid metabolism	map01210
		Biosynthesis of amino acids	map01230
		Arginine biosynthesis	map00220

Gene Ontology

GO term	Ontology	Name
GO:0006520	biological_process	cellular amino acid metabolic process
GO:0005737	cellular_component	cytoplasm
GO:0016787	molecular_function	hydrolase activity
GO:0004046	molecular_function	aminoacylase activity

Expression pattern

Expression pattern detail

SRP	Sample	Description	TPM
SRP075780	SRR3591705	youngest leaf	79.679
	SRR3591706	second leaf	66.963
	SRR3591707	mature leaf	65.715
	SRR3591708	Shoot apex	71.329
	SRR3591709	Stem	79.417
	SRR3591710	White floral bud	80.014
	SRR3591711	White flower	79.511
	SRR3591712	Green floral bud	79.132
	SRR3591713	Yellow flower	78.319
SRP173429	SRR8316895	Juvenile bud stage	76.520
	SRR8316896	Juvenile bud stage	90.783
	SRR8316897	Juvenile bud stage	55.898
	SRR8316894	Third green stage	38.450
	SRR8316900	Third green stage	115.297
	SRR8316901	Third green stage	112.102
	SRR8316898	Complete white stage	35.496
	SRR8316899	Complete white stage	115.514
	SRR8316903	Complete white stage	70.243
	SRR8316902	Silver flowering stage	43.021
	SRR8316904	Silver flowering stage	64.425
	SRR8316905	Silver flowering stage	33.596
	SRR8316906	Gold flowering stage	110.549
	SRR8316907	Gold flowering stage	95.793
	SRR8316908	Gold flowering stage	100.518
SRP132670	SRR6706286	Control	89.440
	SRR6706287	Light intensity 50%	88.539
	SRR6706288	Light intensity 20%	91.029
CNP0000432	CNS0095592	Slightly white alabastrum(diploid) 1	81.910
	CNS0095593	Slightly white alabastrum(diploid) 2	76.556
	CNS0095594	Slightly white alabastrum(diploid) 3	74.960
	CNS0095595	Whole white alabastrum(diploid) 2	63.233
	CNS0095596	Whole white alabastrum(diploid) 3	53.913
	CNS0095597	Whole white alabastrum(diploid) 4	53.146
	CNS0095598	Silvery flower (diploied) 1	77.846
	CNS0095599	Silvery flower (diploied) 2	72.819
	CNS0095600	Silvery flower (diploied) 3	98.417
	CNS0095601	Golden flower (diploid) 1	76.563
	CNS0095602	Golden flower (diploid) 2	125.091
	CNS0095603	Golden flower (diploid) 3	119.154
	CNS0095604	Slightly white alabastrum(tetraploid) 1	81.764
	CNS0095605	Slightly white alabastrum(tetraploid) 2	72.250
	CNS0095606	Slightly white alabastrum(tetraploid) 3	159.562
	CNS0095607	Whole white alabastrum(tetraploid) 1	45.052
	CNS0095608	Whole white alabastrum(tetraploid) 2	35.817
	CNS0095609	Whole white alabastrum(tetraploid) 3	97.388
	CNS0095610	Silvery flower (tetraploid) 1	80.513
	CNS0095611	Silvery flower (tetraploid) 2	83.057
	CNS0095612	Silvery flower (tetraploid) 3	84.537
	CNS0095613	Golden flower (tetraploid) 1	64.914
	CNS0095614	Golden flower (tetraploid) 2	82.037
	CNS0095615	Golden flower (tetraploid) 3	77.327
CRA001975	CRR073297	Stem 1	65.524
	CRR073298	Stem 2	69.142
	CRR073299	Stem 3	55.800
	CRR073300	Leaf 1	80.079
	CRR073301	Leaf 2	70.206
	CRR073302	Leaf 3	54.711
	CRR073303	Juvenile bud 1	49.370
	CRR073304	Juvenile bud 2	50.190
	CRR073305	Juvenile bud 3	67.762
	CRR073306	Third green 1	54.303
	CRR073307	Third green 2	37.417
	CRR073308	Third green 3	47.265
	CRR073309	Second white 1	58.590
	CRR073310	Second white 2	37.852
	CRR073311	Second white 3	43.474
	CRR073312	Silver flowering 1	47.639
	CRR073313	Silver flowering 2	49.433
	CRR073314	Silver flowering 3	42.705
	CRR073315	Gold flowering 1	31.013
	CRR073316	Gold flowering 2	40.728
	CRR073317	Gold flowering 3	42.974
	CRR073318	Tawny withering 1	42.437
	CRR073319	Tawny withering 2	43.634
	CRR073320	Tawny withering 3	38.860