Detail information of GWHGAAZE023833


Functional Annotation

DatabaseOrthologsE valueAnnotation
NrABK95981.16.1629E-130unknown [Populus trichocarpa]
Swissprottr|F4ITL6|RTE1_ARATH3E-115Protein REVERSION-TO-ETHYLENE SENSITIVITY1
trEMBLtr|A9PHX8|A9PHX8_POPTR2E-130Putative uncharacterized protein {ECO:0000313|EMBL:ABK95981.1}
TAIR10AT2G26070.18E-78Protein of unknown function (DUF778)

Location And Transcript Sequence (JBrowse)

ScaffoldTypeStartEndStrand
GWHAAZE00000007gene2760601327608121+
GWHAAZE00000007mRNA2760601327608121+
GWHAAZE00000007exon2760601327606303+
GWHAAZE00000007exon2760769927608121+
GWHAAZE00000007CDS2760601327606303+
GWHAAZE00000007CDS2760769927608121+
Transcript Sequence

Network for GWHGAAZE023833

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist


Functional Module

Module IDFunction Annotation


Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF05608.13DUF77846952.30E-21
PF05608.13DUF778961811.70E-23
Protein Sequence

Gene family

Gene familysubfamily
----

KEGG pathway

KO Enzyme pathway mapID
K20726TMEM222 MAPK signaling pathway - plant map04016

Gene Ontology

GO term OntologyName

Expression pattern


Expression pattern detail

SRPSampleDescriptionTPM
SRP075780SRR3591705youngest leaf4.549
SRR3591706second leaf4.886
SRR3591707mature leaf5.603
SRR3591708Shoot apex5.596
SRR3591709Stem8.274
SRR3591710White floral bud3.817
SRR3591711White flower1.545
SRR3591712Green floral bud3.738
SRR3591713Yellow flower0.887
SRP173429 SRR8316895Juvenile bud stage 1.133
SRR8316896Juvenile bud stage 1.860
SRR8316897Juvenile bud stage 0.188
SRR8316894Third green stage 1.321
SRR8316900Third green stage 4.013
SRR8316901Third green stage 3.359
SRR8316898Complete white stage 1.762
SRR8316899Complete white stage 5.908
SRR8316903Complete white stage 2.445
SRR8316902Silver flowering stage1.109
SRR8316904Silver flowering stage1.046
SRR8316905Silver flowering stage0.632
SRR8316906Gold flowering stage 1.624
SRR8316907Gold flowering stage 1.107
SRR8316908Gold flowering stage 0.505
SRP132670SRR6706286Control1.927
SRR6706287Light intensity 50%1.212
SRR6706288Light intensity 20%1.841
CNP0000432CNS0095592Slightly white alabastrum(diploid) 12.332
CNS0095593Slightly white alabastrum(diploid) 22.505
CNS0095594Slightly white alabastrum(diploid) 32.509
CNS0095595Whole white alabastrum(diploid) 21.408
CNS0095596Whole white alabastrum(diploid) 34.091
CNS0095597Whole white alabastrum(diploid) 42.088
CNS0095598Silvery flower (diploied) 16.971
CNS0095599Silvery flower (diploied) 27.373
CNS0095600Silvery flower (diploied) 31.960
CNS0095601Golden flower (diploid) 15.978
CNS0095602Golden flower (diploid) 22.446
CNS0095603Golden flower (diploid) 33.037
CNS0095604Slightly white alabastrum(tetraploid) 11.087
CNS0095605Slightly white alabastrum(tetraploid) 21.829
CNS0095606Slightly white alabastrum(tetraploid) 32.377
CNS0095607Whole white alabastrum(tetraploid) 11.490
CNS0095608Whole white alabastrum(tetraploid) 21.470
CNS0095609Whole white alabastrum(tetraploid) 32.674
CNS0095610Silvery flower (tetraploid) 12.467
CNS0095611Silvery flower (tetraploid) 22.684
CNS0095612Silvery flower (tetraploid) 30.699
CNS0095613Golden flower (tetraploid) 11.556
CNS0095614Golden flower (tetraploid) 23.642
CNS0095615Golden flower (tetraploid) 31.258
CRA001975CRR073297Stem 12.777
CRR073298Stem 23.346
CRR073299Stem 31.888
CRR073300Leaf 13.898
CRR073301Leaf 23.430
CRR073302Leaf 33.832
CRR073303Juvenile bud 12.050
CRR073304Juvenile bud 22.185
CRR073305Juvenile bud 32.630
CRR073306Third green 10.304
CRR073307Third green 22.085
CRR073308Third green 30.526
CRR073309Second white 11.138
CRR073310Second white 20.345
CRR073311Second white 30.737
CRR073312Silver flowering 10.188
CRR073313Silver flowering 20.161
CRR073314Silver flowering 31.371
CRR073315Gold flowering 13.324
CRR073316Gold flowering 29.595
CRR073317Gold flowering 35.093
CRR073318Tawny withering 17.309
CRR073319Tawny withering 211.226
CRR073320Tawny withering 32.840