Detail information of GWHGAAZE023743


Functional Annotation

DatabaseOrthologsE valueAnnotation
NrXP_011019383.19.57607E-80PREDICTED: 17.9 kDa class II heat shock protein-like [Populus euphratica]
COGYP_004340108.12E-21heat shock protein Hsp20
Swissprottr|P05477|HSP21_SOYBN1E-7617.9 kDa class II heat shock protein
trEMBLtr|A9PA59|A9PA59_POPTR3E-79Heat shock protein 17.7 {ECO:0000313|EMBL:EEE92060.1}
TAIR10AT5G12020.12E-3617.6 kDa class II heat shock protein

Location And Transcript Sequence (JBrowse)

ScaffoldTypeStartEndStrand
GWHAAZE00000007gene2457667824577154+
GWHAAZE00000007mRNA2457667824577154+
GWHAAZE00000007exon2457667824577154+
GWHAAZE00000007CDS2457667824577154+
Transcript Sequence

Network for GWHGAAZE023743

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist


Functional Module

Module IDFunction Annotation


Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF00011.22HSP20521561.70E-31
Protein Sequence

Gene family

Gene familysubfamily
----

KEGG pathway

KO Enzyme pathway mapID
K13993HSP20 Protein processing in endoplasmic reticulum map04141

Gene Ontology

GO term OntologyName

Expression pattern


Expression pattern detail

SRPSampleDescriptionTPM
SRP075780SRR3591705youngest leaf13.052
SRR3591706second leaf0.143
SRR3591707mature leaf1.872
SRR3591708Shoot apex4.239
SRR3591709Stem23.779
SRR3591710White floral bud2.479
SRR3591711White flower7.448
SRR3591712Green floral bud10.183
SRR3591713Yellow flower0.740
SRP173429 SRR8316895Juvenile bud stage 284.304
SRR8316896Juvenile bud stage 594.120
SRR8316897Juvenile bud stage 174.977
SRR8316894Third green stage 4.306
SRR8316900Third green stage 12.993
SRR8316901Third green stage 75.209
SRR8316898Complete white stage 0.160
SRR8316899Complete white stage 3.890
SRR8316903Complete white stage 2.225
SRR8316902Silver flowering stage10.020
SRR8316904Silver flowering stage1.459
SRR8316905Silver flowering stage3.647
SRR8316906Gold flowering stage 26.463
SRR8316907Gold flowering stage 30.450
SRR8316908Gold flowering stage 14.571
SRP132670SRR6706286Control22.328
SRR6706287Light intensity 50%8.193
SRR6706288Light intensity 20%6.193
CNP0000432CNS0095592Slightly white alabastrum(diploid) 114.670
CNS0095593Slightly white alabastrum(diploid) 27.553
CNS0095594Slightly white alabastrum(diploid) 317.948
CNS0095595Whole white alabastrum(diploid) 28.530
CNS0095596Whole white alabastrum(diploid) 38.732
CNS0095597Whole white alabastrum(diploid) 49.340
CNS0095598Silvery flower (diploied) 17.796
CNS0095599Silvery flower (diploied) 2301.184
CNS0095600Silvery flower (diploied) 3127.565
CNS0095601Golden flower (diploid) 1605.755
CNS0095602Golden flower (diploid) 2184.431
CNS0095603Golden flower (diploid) 3177.440
CNS0095604Slightly white alabastrum(tetraploid) 112.167
CNS0095605Slightly white alabastrum(tetraploid) 212.860
CNS0095606Slightly white alabastrum(tetraploid) 36.269
CNS0095607Whole white alabastrum(tetraploid) 16.460
CNS0095608Whole white alabastrum(tetraploid) 24.008
CNS0095609Whole white alabastrum(tetraploid) 37.881
CNS0095610Silvery flower (tetraploid) 11.208
CNS0095611Silvery flower (tetraploid) 22.373
CNS0095612Silvery flower (tetraploid) 322.347
CNS0095613Golden flower (tetraploid) 12.635
CNS0095614Golden flower (tetraploid) 21.200
CNS0095615Golden flower (tetraploid) 30.277
CRA001975CRR073297Stem 112.750
CRR073298Stem 25.131
CRR073299Stem 311.142
CRR073300Leaf 14.614
CRR073301Leaf 24.741
CRR073302Leaf 35.734
CRR073303Juvenile bud 15.304
CRR073304Juvenile bud 25.118
CRR073305Juvenile bud 33.322
CRR073306Third green 11.036
CRR073307Third green 21.704
CRR073308Third green 31.574
CRR073309Second white 15.284
CRR073310Second white 26.138
CRR073311Second white 34.337
CRR073312Silver flowering 16.617
CRR073313Silver flowering 22.210
CRR073314Silver flowering 32.501
CRR073315Gold flowering 11.747
CRR073316Gold flowering 26.509
CRR073317Gold flowering 37.429
CRR073318Tawny withering 17.973
CRR073319Tawny withering 23.603
CRR073320Tawny withering 39.723