Detail information of GWHGAAZE023682


Functional Annotation

DatabaseOrthologsE valueAnnotation
NrXP_002280069.20PREDICTED: LRR receptor-like serine/threonine-protein kinase ERECTA [Vitis vinifera]
COGYP_004775215.11E-58RHS repeat-associated core domain-containing protein
Swissprottr|Q42371|ERECT_ARATH0LRR receptor-like serine/threonine-protein kinase ERECTA {ECO:0000303|PubMed:8624444} (Precursor)
trEMBLtr|D7STX8|D7STX8_VITVI0Putative uncharacterized protein {ECO:0000313|EMBL:CBI20727.3}
TAIR10AT2G26330.10Leucine-rich receptor-like protein kinase family protein

Location And Transcript Sequence (JBrowse)

ScaffoldTypeStartEndStrand
GWHAAZE00000007gene2199561822005335-
GWHAAZE00000007mRNA2199561822005335-
GWHAAZE00000007exon2200525722005335-
GWHAAZE00000007exon2200467222005019-
GWHAAZE00000007exon2200397322004111-
GWHAAZE00000007exon2200368622003757-
GWHAAZE00000007exon2200344922003520-
GWHAAZE00000007exon2200318522003256-
GWHAAZE00000007exon2200299122003062-
GWHAAZE00000007exon2200283122002902-
GWHAAZE00000007exon2200263022002701-
GWHAAZE00000007exon2200247022002541-
GWHAAZE00000007exon2200232022002388-
GWHAAZE00000007exon2200210222002173-
GWHAAZE00000007exon2200185622001927-
GWHAAZE00000007exon2200165822001729-
GWHAAZE00000007exon2200136422001435-
GWHAAZE00000007exon2200120622001277-
GWHAAZE00000007exon2200105222001123-
GWHAAZE00000007exon2200082722000898-
GWHAAZE00000007exon2200063122000702-
GWHAAZE00000007exon2199953521999603-
GWHAAZE00000007exon2199930721999378-
GWHAAZE00000007exon2199908221999155-
GWHAAZE00000007exon2199858121998709-
GWHAAZE00000007exon2199786521998212-
GWHAAZE00000007exon2199648921996859-
GWHAAZE00000007exon2199561821995998-
GWHAAZE00000007five_prime_UTR2200525722005335-
GWHAAZE00000007five_prime_UTR2200475122005019-
GWHAAZE00000007CDS2200467222004750-
GWHAAZE00000007CDS2200397322004111-
GWHAAZE00000007CDS2200368622003757-
GWHAAZE00000007CDS2200344922003520-
GWHAAZE00000007CDS2200318522003256-
GWHAAZE00000007CDS2200299122003062-
GWHAAZE00000007CDS2200283122002902-
GWHAAZE00000007CDS2200263022002701-
GWHAAZE00000007CDS2200247022002541-
GWHAAZE00000007CDS2200232022002388-
GWHAAZE00000007CDS2200210222002173-
GWHAAZE00000007CDS2200185622001927-
GWHAAZE00000007CDS2200165822001729-
GWHAAZE00000007CDS2200136422001435-
GWHAAZE00000007CDS2200120622001277-
GWHAAZE00000007CDS2200105222001123-
GWHAAZE00000007CDS2200082722000898-
GWHAAZE00000007CDS2200063122000702-
GWHAAZE00000007CDS2199953521999603-
GWHAAZE00000007CDS2199930721999378-
GWHAAZE00000007CDS2199908221999155-
GWHAAZE00000007CDS2199858121998709-
GWHAAZE00000007CDS2199786521998212-
GWHAAZE00000007CDS2199648921996859-
GWHAAZE00000007CDS2199561821995998-
Transcript Sequence

Network for GWHGAAZE023682

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist


Functional Module

Module IDFunction Annotation


Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF08263.13LRRNT_224642.40E-10
PF13855.7LRR_81412002.80E-06
PF13855.7LRR_83794391.50E-07
PF00069.26Pkinase6048633.00E-44
Protein Sequence

Gene family

Gene familysubfamily
Protein Kinases FamilyRLK-Pelle_LRR-XIIIb

KEGG pathway

KO Enzyme pathway mapID
K20718ER MAPK signaling pathway - plant map04016

Gene Ontology

GO term OntologyName
GO:0006468biological_processprotein phosphorylation
GO:0005515molecular_functionprotein binding
GO:0005524molecular_functionATP binding
GO:0004672molecular_functionprotein kinase activity

Expression pattern


Expression pattern detail

SRPSampleDescriptionTPM
SRP075780SRR3591705youngest leaf13.399
SRR3591706second leaf24.169
SRR3591707mature leaf1.197
SRR3591708Shoot apex121.555
SRR3591709Stem1.375
SRR3591710White floral bud16.420
SRR3591711White flower9.143
SRR3591712Green floral bud54.318
SRR3591713Yellow flower4.261
SRP173429 SRR8316895Juvenile bud stage 37.415
SRR8316896Juvenile bud stage 39.935
SRR8316897Juvenile bud stage 22.432
SRR8316894Third green stage 19.642
SRR8316900Third green stage 48.821
SRR8316901Third green stage 50.876
SRR8316898Complete white stage 6.286
SRR8316899Complete white stage 40.646
SRR8316903Complete white stage 9.623
SRR8316902Silver flowering stage3.261
SRR8316904Silver flowering stage5.652
SRR8316905Silver flowering stage3.372
SRR8316906Gold flowering stage 6.449
SRR8316907Gold flowering stage 4.198
SRR8316908Gold flowering stage 4.555
SRP132670SRR6706286Control42.024
SRR6706287Light intensity 50%48.030
SRR6706288Light intensity 20%55.438
CNP0000432CNS0095592Slightly white alabastrum(diploid) 127.225
CNS0095593Slightly white alabastrum(diploid) 230.033
CNS0095594Slightly white alabastrum(diploid) 316.035
CNS0095595Whole white alabastrum(diploid) 222.510
CNS0095596Whole white alabastrum(diploid) 323.593
CNS0095597Whole white alabastrum(diploid) 421.510
CNS0095598Silvery flower (diploied) 15.300
CNS0095599Silvery flower (diploied) 24.786
CNS0095600Silvery flower (diploied) 37.075
CNS0095601Golden flower (diploid) 13.528
CNS0095602Golden flower (diploid) 24.064
CNS0095603Golden flower (diploid) 33.805
CNS0095604Slightly white alabastrum(tetraploid) 134.468
CNS0095605Slightly white alabastrum(tetraploid) 231.732
CNS0095606Slightly white alabastrum(tetraploid) 390.855
CNS0095607Whole white alabastrum(tetraploid) 111.847
CNS0095608Whole white alabastrum(tetraploid) 213.916
CNS0095609Whole white alabastrum(tetraploid) 352.365
CNS0095610Silvery flower (tetraploid) 116.504
CNS0095611Silvery flower (tetraploid) 217.342
CNS0095612Silvery flower (tetraploid) 316.158
CNS0095613Golden flower (tetraploid) 19.734
CNS0095614Golden flower (tetraploid) 211.147
CNS0095615Golden flower (tetraploid) 316.666
CRA001975CRR073297Stem 1107.540
CRR073298Stem 295.856
CRR073299Stem 390.445
CRR073300Leaf 1113.114
CRR073301Leaf 280.723
CRR073302Leaf 386.204
CRR073303Juvenile bud 186.560
CRR073304Juvenile bud 272.408
CRR073305Juvenile bud 383.061
CRR073306Third green 14.441
CRR073307Third green 24.434
CRR073308Third green 35.996
CRR073309Second white 13.149
CRR073310Second white 22.860
CRR073311Second white 31.905
CRR073312Silver flowering 10.956
CRR073313Silver flowering 20.500
CRR073314Silver flowering 30.543
CRR073315Gold flowering 11.482
CRR073316Gold flowering 22.308
CRR073317Gold flowering 31.371
CRR073318Tawny withering 10.256
CRR073319Tawny withering 20.229
CRR073320Tawny withering 30.126