Gene detail

Detail information of GWHGAAZE023594

Functional Annotation

Database	Orthologs	E value	Annotation
Nr	KHG10868.1	5.0418E-138	hypothetical protein F383_12165 [Gossypium arboreum]
Swissprot	tr\|Q8GYX0\|MOB1_ARATH	4E-132	MOB kinase activator-like 1
trEMBL	tr\|A0A067DEW1\|A0A067DEW1_CITSI	3E-137	Uncharacterized protein {ECO:0000313\|EMBL:KDO40075.1}
TAIR10	AT5G45550.1	1E-106	Mob1/phocein family protein

Location And Transcript Sequence (JBrowse)

Scaffold	Type	Start	End	Strand
GWHAAZE00000007	gene	16172039	16181668	+
GWHAAZE00000007	mRNA	16172039	16181668	+
GWHAAZE00000007	exon	16172039	16172153	+
GWHAAZE00000007	exon	16173648	16173741	+
GWHAAZE00000007	exon	16179588	16179721	+
GWHAAZE00000007	exon	16179849	16180012	+
GWHAAZE00000007	exon	16181113	16181241	+
GWHAAZE00000007	exon	16181331	16181668	+
GWHAAZE00000007	CDS	16172039	16172153	+
GWHAAZE00000007	CDS	16173648	16173741	+
GWHAAZE00000007	CDS	16179588	16179721	+
GWHAAZE00000007	CDS	16179849	16180012	+
GWHAAZE00000007	CDS	16181113	16181187	+
GWHAAZE00000007	three_prime_UTR	16181188	16181241	+
GWHAAZE00000007	three_prime_UTR	16181331	16181668	+

Transcript Sequence
>GWHTAAZE023624 ATGCAGGGGGCGCAGCTAAGAAAGCACATTGATGCTACTTTAGGCAGTGGAAACCTGAGAGAAGCCGTAAGACTTCCTCCAGGGGAAGATATAAATGAATGGCTTGCTGTCAACACTGTAGATTTCTTCAACCAGGTGAATCTGCTTTATGGCACCCTAACTGAATTTTGTACTGCAGAGAACTGTCCTACAATGACTGCTGGCCCCAAGTACGAGTACAGATGGGCAGATGGTGTTCAAATCAAGAAACCAATTGAAGTTTCGGCTCCAAAATACGTTGAGTACTTGATGGACTGGATCGAATCTCAGTTGGACGATGAATCTTTATTTCCTCAAAGGCTTGGCGCACCATTTCCTCCAAACTTCAGGGAAGTTGTGAAGACGATATTCAAACGTTTATTCCGTGTTTATGCTCACATTTATCATTCCCACTTCCAAAAGATTGTGAGTCTTAAGGAGGAGGCACATCTAAATACCTGCTTCAAGCATTTCATACTCTTTACCTGTGAATTTGGACTGATAGACAAAAAGGAACTAGCTCCACTTCAAGAGCTTATAGAATCCATTGTTGTCCCTTACTGAATAGGCTTTCCCCCTCTTCGGTTTTTCATCTTAAAAACTGAGTTTTTATTGAAGAGCATCTACAGAATCAATTAGCAAAGTGGGAGGTTCCGGACGTTGATTCTGTTAAGCGGAATGTGGATGGGGCATTCTGTTGAGCTGAAAGACAAGAATTCGTTCATTCGTCAAGTGCCTTCAAATACACCTTGCAAAATAGACTCAACTAACTGACTCGCGGATGTGGATCAATAGGAATAGACCAACAATAACAAACAAAAGTTGAATAAGGACACAATAACCCTTAATAACGGCGTCTAAATGACATAACATTGGCAAAAACGACGCTGTTGAACTATAATCCAATATAACTCAAGTCCCCAATACAATATGAGAGTCAATAATTTTTCGATTGA

Network for GWHGAAZE023594

Network category	Network	Top300 PCC genelist
Coexpression Positive	Network	Top300 PCC genelist
Coexpression Negative	Network	Top300 PCC genelist

Functional Module

Module ID	Function Annotation

Protein Structure

Pfam accession	Pfam name	Alignment start	Alignment end	E-value
PF03637.18	Mob1_phocein	12	182	4.20E-82

Protein Sequence

Gene family

Gene family	subfamily
--	--

KEGG pathway

KO	Enzyme	pathway	mapID
K06685	MOB1, Mats	Hippo signaling pathway	map04390
		Hippo signaling pathway - fly	map04391
		Hippo signaling pathway - multiple species	map04392
		Cell cycle - yeast	map04111

Gene Ontology

GO term	Ontology	Name

Expression pattern

Expression pattern detail

SRP	Sample	Description	TPM
SRP075780	SRR3591705	youngest leaf	107.411
	SRR3591706	second leaf	43.932
	SRR3591707	mature leaf	37.684
	SRR3591708	Shoot apex	62.172
	SRR3591709	Stem	143.624
	SRR3591710	White floral bud	113.716
	SRR3591711	White flower	143.857
	SRR3591712	Green floral bud	98.095
	SRR3591713	Yellow flower	177.312
SRP173429	SRR8316895	Juvenile bud stage	43.184
	SRR8316896	Juvenile bud stage	69.213
	SRR8316897	Juvenile bud stage	37.839
	SRR8316894	Third green stage	24.801
	SRR8316900	Third green stage	95.567
	SRR8316901	Third green stage	90.151
	SRR8316898	Complete white stage	66.558
	SRR8316899	Complete white stage	152.680
	SRR8316903	Complete white stage	85.848
	SRR8316902	Silver flowering stage	63.269
	SRR8316904	Silver flowering stage	62.853
	SRR8316905	Silver flowering stage	35.508
	SRR8316906	Gold flowering stage	128.394
	SRR8316907	Gold flowering stage	128.247
	SRR8316908	Gold flowering stage	129.718
SRP132670	SRR6706286	Control	81.598
	SRR6706287	Light intensity 50%	85.030
	SRR6706288	Light intensity 20%	94.975
CNP0000432	CNS0095592	Slightly white alabastrum(diploid) 1	78.443
	CNS0095593	Slightly white alabastrum(diploid) 2	100.561
	CNS0095594	Slightly white alabastrum(diploid) 3	78.919
	CNS0095595	Whole white alabastrum(diploid) 2	81.815
	CNS0095596	Whole white alabastrum(diploid) 3	76.366
	CNS0095597	Whole white alabastrum(diploid) 4	80.984
	CNS0095598	Silvery flower (diploied) 1	81.106
	CNS0095599	Silvery flower (diploied) 2	90.831
	CNS0095600	Silvery flower (diploied) 3	129.872
	CNS0095601	Golden flower (diploid) 1	100.118
	CNS0095602	Golden flower (diploid) 2	132.653
	CNS0095603	Golden flower (diploid) 3	125.725
	CNS0095604	Slightly white alabastrum(tetraploid) 1	89.062
	CNS0095605	Slightly white alabastrum(tetraploid) 2	89.491
	CNS0095606	Slightly white alabastrum(tetraploid) 3	119.999
	CNS0095607	Whole white alabastrum(tetraploid) 1	65.199
	CNS0095608	Whole white alabastrum(tetraploid) 2	70.278
	CNS0095609	Whole white alabastrum(tetraploid) 3	96.527
	CNS0095610	Silvery flower (tetraploid) 1	152.433
	CNS0095611	Silvery flower (tetraploid) 2	160.300
	CNS0095612	Silvery flower (tetraploid) 3	127.604
	CNS0095613	Golden flower (tetraploid) 1	182.498
	CNS0095614	Golden flower (tetraploid) 2	143.608
	CNS0095615	Golden flower (tetraploid) 3	146.294
CRA001975	CRR073297	Stem 1	38.893
	CRR073298	Stem 2	38.563
	CRR073299	Stem 3	45.091
	CRR073300	Leaf 1	57.972
	CRR073301	Leaf 2	54.111
	CRR073302	Leaf 3	64.259
	CRR073303	Juvenile bud 1	71.771
	CRR073304	Juvenile bud 2	72.874
	CRR073305	Juvenile bud 3	81.439
	CRR073306	Third green 1	58.314
	CRR073307	Third green 2	58.971
	CRR073308	Third green 3	55.074
	CRR073309	Second white 1	67.257
	CRR073310	Second white 2	53.597
	CRR073311	Second white 3	44.695
	CRR073312	Silver flowering 1	52.641
	CRR073313	Silver flowering 2	52.662
	CRR073314	Silver flowering 3	48.013
	CRR073315	Gold flowering 1	32.725
	CRR073316	Gold flowering 2	33.893
	CRR073317	Gold flowering 3	29.462
	CRR073318	Tawny withering 1	55.017
	CRR073319	Tawny withering 2	77.194
	CRR073320	Tawny withering 3	63.142