Gene detail

Detail information of GWHGAAZE023389

Functional Annotation

Database	Orthologs	E value	Annotation
Nr	XP_011099128.1	1.3242E-108	PREDICTED: mitogen-activated protein kinase kinase kinase 2-like [Sesamum indicum]
COG	YP_827012.1	2E-19	serine/threonine protein kinase
Swissprot	tr\|Q40541\|NPK1_TOBAC	3E-29	Mitogen-activated protein kinase kinase kinase NPK1
trEMBL	tr\|A0A022RWI8\|A0A022RWI8_ERYGU	6E-107	Uncharacterized protein {ECO:0000313\|EMBL:EYU44409.1}
TAIR10	AT4G36950.1	7E-64	mitogen-activated protein kinase kinase kinase 21

Location And Transcript Sequence (JBrowse)

Scaffold	Type	Start	End	Strand
GWHAAZE00000007	gene	7023348	7024082	+
GWHAAZE00000007	mRNA	7023348	7024082	+
GWHAAZE00000007	exon	7023348	7024082	+
GWHAAZE00000007	CDS	7023348	7024082	+

Transcript Sequence
>GWHTAAZE023419 ATGGAGTGGGTACGTGGAGAGCCAATTGGCCATGGAAGCTTTGCATCAGTCAGTTTAGCAATACCCAGAAGCCAGAATTCCCAATTACTTCCATTAATGGCCGTTAAGTCTTGCTCTGCTTCACACTCTGTTTCTCTCATGAAGGAAAAATCGATATTAGATGAGTTCAGTGATTGCCCTCAAATTATTACATGTTTTGGTCACAATTTCAGTTTCGAAAACGGCGAAAAATTGTATAATGTATTGTTGGAGTACGCCTCCGGTGGCAATTTAGCTGATAAAATCAAGAACTCCGGCGACCGGAAGTCACCGGAAAGTGACGTCCGGCGATACACAAAATCAATTCTTAAGGGACTGAACAGTGTTCATAAGAGTGGGTATGTTCACTGTGATATTAAGCTTCAAAATATTTTGTTATCGAATGAGGTAGCGAAGATAGCGGATTTTGGTTTGGCTAAGAAAGCCGGAGTTAAGGAGAATGGTTACGAATTGAGAGGTACGCCTTTGTATTTGTCGCCGGAGATTGTGACCGCCGGCGAGCAGGAGGCGCCGGCCGACATTTGGGCACTTGGGTGTGTGGTGTCAGAGATGGTGACCGGATCGCCAGCGTGGACGTGCCGGCGCGAGTCGGACATCAGCGGGTTGTTGATGAGGATTGGGTTGGGAAATGAAATCCCGGAGATTCCCGGAAATTATCTGATGAAGGAAAAGATTTCCTCGGAAAGTGTTTTCTAA

Network for GWHGAAZE023389

Network category	Network	Top300 PCC genelist
Coexpression Positive	Network	Top300 PCC genelist
Coexpression Negative	Network	Top300 PCC genelist

Functional Module

Module ID	Function Annotation

Protein Structure

Pfam accession	Pfam name	Alignment start	Alignment end	E-value
PF00069.26	Pkinase	5	210	3.30E-42

Protein Sequence

Gene family

Gene family	subfamily
Protein Kinases Family	STE_STE11

KEGG pathway

KO	Enzyme	pathway	mapID
--	--	--	--

Gene Ontology

GO term	Ontology	Name
GO:0006468	biological_process	protein phosphorylation
GO:0004672	molecular_function	protein kinase activity
GO:0005524	molecular_function	ATP binding

Expression pattern

Expression pattern detail

SRP	Sample	Description	TPM
SRP075780	SRR3591705	youngest leaf	15.897
	SRR3591706	second leaf	10.188
	SRR3591707	mature leaf	20.845
	SRR3591708	Shoot apex	2.249
	SRR3591709	Stem	8.220
	SRR3591710	White floral bud	17.200
	SRR3591711	White flower	11.116
	SRR3591712	Green floral bud	7.179
	SRR3591713	Yellow flower	3.855
SRP173429	SRR8316895	Juvenile bud stage	30.616
	SRR8316896	Juvenile bud stage	2.244
	SRR8316897	Juvenile bud stage	21.791
	SRR8316894	Third green stage	0.676
	SRR8316900	Third green stage	1.901
	SRR8316901	Third green stage	3.472
	SRR8316898	Complete white stage	1.831
	SRR8316899	Complete white stage	32.763
	SRR8316903	Complete white stage	3.663
	SRR8316902	Silver flowering stage	1.611
	SRR8316904	Silver flowering stage	1.855
	SRR8316905	Silver flowering stage	0.928
	SRR8316906	Gold flowering stage	1.455
	SRR8316907	Gold flowering stage	3.749
	SRR8316908	Gold flowering stage	2.455
SRP132670	SRR6706286	Control	6.226
	SRR6706287	Light intensity 50%	8.627
	SRR6706288	Light intensity 20%	11.927
CNP0000432	CNS0095592	Slightly white alabastrum(diploid) 1	7.946
	CNS0095593	Slightly white alabastrum(diploid) 2	13.199
	CNS0095594	Slightly white alabastrum(diploid) 3	11.366
	CNS0095595	Whole white alabastrum(diploid) 2	11.556
	CNS0095596	Whole white alabastrum(diploid) 3	3.873
	CNS0095597	Whole white alabastrum(diploid) 4	6.121
	CNS0095598	Silvery flower (diploied) 1	18.515
	CNS0095599	Silvery flower (diploied) 2	29.716
	CNS0095600	Silvery flower (diploied) 3	8.372
	CNS0095601	Golden flower (diploid) 1	25.267
	CNS0095602	Golden flower (diploid) 2	11.499
	CNS0095603	Golden flower (diploid) 3	11.319
	CNS0095604	Slightly white alabastrum(tetraploid) 1	2.492
	CNS0095605	Slightly white alabastrum(tetraploid) 2	3.187
	CNS0095606	Slightly white alabastrum(tetraploid) 3	4.472
	CNS0095607	Whole white alabastrum(tetraploid) 1	5.888
	CNS0095608	Whole white alabastrum(tetraploid) 2	3.167
	CNS0095609	Whole white alabastrum(tetraploid) 3	3.057
	CNS0095610	Silvery flower (tetraploid) 1	2.441
	CNS0095611	Silvery flower (tetraploid) 2	2.002
	CNS0095612	Silvery flower (tetraploid) 3	2.092
	CNS0095613	Golden flower (tetraploid) 1	1.088
	CNS0095614	Golden flower (tetraploid) 2	1.411
	CNS0095615	Golden flower (tetraploid) 3	0.198
CRA001975	CRR073297	Stem 1	4.297
	CRR073298	Stem 2	2.376
	CRR073299	Stem 3	1.577
	CRR073300	Leaf 1	3.234
	CRR073301	Leaf 2	4.449
	CRR073302	Leaf 3	2.657
	CRR073303	Juvenile bud 1	3.173
	CRR073304	Juvenile bud 2	6.401
	CRR073305	Juvenile bud 3	3.726
	CRR073306	Third green 1	0.361
	CRR073307	Third green 2	1.866
	CRR073308	Third green 3	1.779
	CRR073309	Second white 1	0.000
	CRR073310	Second white 2	0.391
	CRR073311	Second white 3	0.082
	CRR073312	Silver flowering 1	0.000
	CRR073313	Silver flowering 2	0.102
	CRR073314	Silver flowering 3	0.363
	CRR073315	Gold flowering 1	2.644
	CRR073316	Gold flowering 2	8.599
	CRR073317	Gold flowering 3	9.026
	CRR073318	Tawny withering 1	6.784
	CRR073319	Tawny withering 2	42.271
	CRR073320	Tawny withering 3	10.621