Gene detail

Detail information of GWHGAAZE023187

Functional Annotation

Database	Orthologs	E value	Annotation
Nr	XP_011025689.1	0	PREDICTED: BEL1-like homeodomain protein 4 [Populus euphratica]
Swissprot	tr\|Q9SW80\|BLH2_ARATH	9E-160	BEL1-like homeodomain protein 2
trEMBL	tr\|B9HEL7\|B9HEL7_POPTR	0	Uncharacterized protein {ECO:0000313\|EMBL:EEE91224.2}
TAIR10	AT4G36870.2	3E-111	BEL1-like homeodomain 2

Location And Transcript Sequence (JBrowse)

Scaffold	Type	Start	End	Strand
GWHAAZE00000007	gene	1366167	1372308	+
GWHAAZE00000007	mRNA	1366167	1372308	+
GWHAAZE00000007	exon	1366167	1367327	+
GWHAAZE00000007	exon	1368037	1368419	+
GWHAAZE00000007	exon	1369888	1369948	+
GWHAAZE00000007	exon	1371754	1372308	+
GWHAAZE00000007	CDS	1366167	1367327	+
GWHAAZE00000007	CDS	1368037	1368419	+
GWHAAZE00000007	CDS	1369888	1369948	+
GWHAAZE00000007	CDS	1371754	1372308	+

Transcript Sequence
>GWHTAAZE023217 ATGTCACAAGATTATCACCACCACAACCAAGGTGTTTTCAGTACCTTCTCGAATGGCGGCATCGATATCCGATCCCAACAAGACCACCAGCACCACGTAGGTCACCAGATCCGGAGAGATAAGGTTAGACTCCAAGGCTTCGAGCCGCCACTCGTAGCCATAGACGAGGAGGTATCAGGTGGCGGAGGCAGCTTTTCGATGTTATCGGAAATGTTCAATTTCCCGCCTGGCGGTTCAGCCGCGGAGTTATTGGAAAGCCAGATACCTCCGATGAACTACCGGAGTACTCCGTGGTACGGAAATATCAACGGACAGGATCAGCCGCCCAAGAGTATTCCGATTTCCGACAGTATAAATCCAGATTCCTCAGCAGCCGCAGCCGCCATGCAGCTGTTTTTGATGAATCCTACACAGCATCAAAGGTCGCAGTCTCCGCCATCGCCACATCAGCATCCATCTTCCACGCTTCATATGTTGCTGCCAGGCCAGCCGTCATCGAATTCTAGTGTTCTTCATCAGGATTTTGATCATGTGGTAGATCCGGCCGCGCAATTCGCGTGGATTAATCAAGGACACGGACACGGGCATGAAGGACGAGGTCTTTCGTTGTCGCTCTCATCTTCATTGGAAGCAGCTAAGGCCGAGGAATTGAGGATCGGAGATGAGAACAGCGACATGTTATATTTCAATAATCAAGGAGGAGGAGGTAATAATAATTTTTCAATGAACAAGAATTTGGGAGGGGGTCATTTGCAAGGTGTGGGAGTGGGGTTGGGTCAAGCCCATAACCTGGTTCAAGTAGGATTCGGGTCGAGTTCCATGGGAGTGGTGAATGTTTTGAGGAATTCAAAGTATGGGAAGGCTGCACAAGAATTGTTGGAAGAGTTTTGTAGCGTTGGAAGGGGTCAGTTTTTTAAGAATAAGCACAATAAACTTAGTAGGCTTAACAGTACTACTACTTCAAACCCTAATACTTCTAATTCCGCTGCCGCCGGCGGTTCTTCATCTTCGACAAGGGATCAGCCTCCTTTGTCAGCTGCTGATAGAATTGAGCACCAAAGAAGGAAGGTGAAACTTTTGTCCATGCTTGATGAGGCATGTAATCTCTCTCACTCTCTCTCCCTCCTACTCTCTTTCTCTAGCTCTCTTCTAATCATTGTTGTGGATCGAAGATACAACCACTATTGTGAGCAAATGCAAATGGTAGTAAACTCATTCGACCTAGTGATGGGATTTGGAGCGGCAGTGCCATACACTGCGCTAGCACAAAAGGCAATGTCGCGCCATTTTAGATGCTTAAAAGACGCCATAACGGCACAAATAAAGACTAGTTGTGAACTATTGGGGGAGAAAGACGCGGGCACTTCGGGGTTTACTAAAGGAGAAACCCCGAGGTTGAAACTACTGGAACAAAGCTTAAGACAACAAAGGGCATTTCATCAAATGGGTATGATGGAACAAGAAGCTTGGAGACCCCAAAGAGGCTTGCCCGAACGCTCTGTTAATATTCTTAGAGCTTGGCTATTCGAGCATTTCTTACACCCGTACCCAAGTGATGCAGATAAACACTTATTGTCAAGACAGACTGGTCTATCCAGAAACCAGGTATCAAACTGGTTCATAAATGCAAGGGTCCGGCTGTGGAAACCGATGGTAGAAGAGATGTACCAACAAGAAAGCAAAGAAGAGGAAGAACAAGAAGAAGATGAAGAGAGAGAACACGAAGACTACAATAACAACAACAATAACAGTTCTGGCGTTGCACAAACTCCAATGCTTACCATTCCAGCAGCAGCATCTTCCTCAACAGCAACTAATTACACACCACCAGGCAAGAGATCCGAATTCAATGCGCCCGACAACGACCCTTCAATCTTTGCAATCAATGCGCATCGTTTCTCGGAAAACCAAGCTAAATTCCCCTACTCCACCGCCACCACCACCATGGCTCCGCCACTAAACCAACCTTTTCAGGCCACATATTCCTCCTCCGCCACCACAACGACCTCGGGAAATGTGGACAGTGGGTCAACGCTCATAAGGTTTGGGACCACTGCTGGTGACGTGTCACTCACGTTAGGGCTACGTCATGCCGGGAACCTACCAGATAAGAGTAAGACTACCACTCCGTTCTCAGTTAGAGACTTTGGGGGCTGTTAG

Network for GWHGAAZE023187

Network category	Network	Top300 PCC genelist
Coexpression Positive	Network	Top300 PCC genelist
Coexpression Negative	Network	Top300 PCC genelist

Functional Module

Module ID	Function Annotation

Protein Structure

Pfam accession	Pfam name	Alignment start	Alignment end	E-value
PF07526.12	POX	279	438	5.90E-49
PF05920.12	Homeobox_KN	507	546	3.70E-17

Protein Sequence

Gene family

Gene family	subfamily
Transcription Factors Family	HB-BELL

KEGG pathway

KO	Enzyme	pathway	mapID
--	--	--	--

Gene Ontology

GO term	Ontology	Name
GO:0006355	biological_process	regulation of transcription, DNA-templated
GO:0003677	molecular_function	DNA binding

Expression pattern

Expression pattern detail

SRP	Sample	Description	TPM
SRP075780	SRR3591705	youngest leaf	2.549
	SRR3591706	second leaf	65.267
	SRR3591707	mature leaf	91.256
	SRR3591708	Shoot apex	29.519
	SRR3591709	Stem	28.866
	SRR3591710	White floral bud	47.927
	SRR3591711	White flower	19.895
	SRR3591712	Green floral bud	41.119
	SRR3591713	Yellow flower	11.772
SRP173429	SRR8316895	Juvenile bud stage	13.503
	SRR8316896	Juvenile bud stage	15.216
	SRR8316897	Juvenile bud stage	5.928
	SRR8316894	Third green stage	7.583
	SRR8316900	Third green stage	22.445
	SRR8316901	Third green stage	23.670
	SRR8316898	Complete white stage	11.708
	SRR8316899	Complete white stage	21.976
	SRR8316903	Complete white stage	17.081
	SRR8316902	Silver flowering stage	6.704
	SRR8316904	Silver flowering stage	6.922
	SRR8316905	Silver flowering stage	3.991
	SRR8316906	Gold flowering stage	13.966
	SRR8316907	Gold flowering stage	8.822
	SRR8316908	Gold flowering stage	10.449
SRP132670	SRR6706286	Control	43.948
	SRR6706287	Light intensity 50%	44.932
	SRR6706288	Light intensity 20%	50.433
CNP0000432	CNS0095592	Slightly white alabastrum(diploid) 1	2.998
	CNS0095593	Slightly white alabastrum(diploid) 2	2.081
	CNS0095594	Slightly white alabastrum(diploid) 3	4.613
	CNS0095595	Whole white alabastrum(diploid) 2	4.252
	CNS0095596	Whole white alabastrum(diploid) 3	5.402
	CNS0095597	Whole white alabastrum(diploid) 4	4.533
	CNS0095598	Silvery flower (diploied) 1	2.595
	CNS0095599	Silvery flower (diploied) 2	3.105
	CNS0095600	Silvery flower (diploied) 3	12.606
	CNS0095601	Golden flower (diploid) 1	3.406
	CNS0095602	Golden flower (diploid) 2	4.273
	CNS0095603	Golden flower (diploid) 3	3.727
	CNS0095604	Slightly white alabastrum(tetraploid) 1	7.115
	CNS0095605	Slightly white alabastrum(tetraploid) 2	6.537
	CNS0095606	Slightly white alabastrum(tetraploid) 3	13.371
	CNS0095607	Whole white alabastrum(tetraploid) 1	1.589
	CNS0095608	Whole white alabastrum(tetraploid) 2	3.400
	CNS0095609	Whole white alabastrum(tetraploid) 3	28.589
	CNS0095610	Silvery flower (tetraploid) 1	15.020
	CNS0095611	Silvery flower (tetraploid) 2	17.988
	CNS0095612	Silvery flower (tetraploid) 3	13.805
	CNS0095613	Golden flower (tetraploid) 1	4.068
	CNS0095614	Golden flower (tetraploid) 2	11.982
	CNS0095615	Golden flower (tetraploid) 3	8.255
CRA001975	CRR073297	Stem 1	35.840
	CRR073298	Stem 2	31.087
	CRR073299	Stem 3	22.609
	CRR073300	Leaf 1	32.748
	CRR073301	Leaf 2	27.756
	CRR073302	Leaf 3	29.509
	CRR073303	Juvenile bud 1	24.146
	CRR073304	Juvenile bud 2	47.391
	CRR073305	Juvenile bud 3	16.282
	CRR073306	Third green 1	27.201
	CRR073307	Third green 2	11.122
	CRR073308	Third green 3	19.247
	CRR073309	Second white 1	6.019
	CRR073310	Second white 2	26.285
	CRR073311	Second white 3	13.850
	CRR073312	Silver flowering 1	6.656
	CRR073313	Silver flowering 2	4.150
	CRR073314	Silver flowering 3	4.629
	CRR073315	Gold flowering 1	36.385
	CRR073316	Gold flowering 2	46.133
	CRR073317	Gold flowering 3	20.702
	CRR073318	Tawny withering 1	14.143
	CRR073319	Tawny withering 2	9.590
	CRR073320	Tawny withering 3	21.525