Gene detail

Detail information of GWHGAAZE023145

Functional Annotation

Database	Orthologs	E value	Annotation
Nr	EYU44220.1	7.4306E-145	hypothetical protein MIMGU_mgv1a003782mg [Erythranthe guttata]
COG	YP_001958461.1	1E-27	hypothetical protein Aasi_1443
Swissprot	tr\|Q9SCZ4\|FERON_ARATH	1E-137	Receptor-like protein kinase FERONIA (Precursor)
trEMBL	tr\|A0A022RZ18\|A0A022RZ18_ERYGU	3E-145	Uncharacterized protein {ECO:0000313\|EMBL:EYU44220.1}
TAIR10	AT3G51550.1	3E-105	Malectin/receptor-like protein kinase family protein

Location And Transcript Sequence (JBrowse)

Scaffold	Type	Start	End	Strand
GWHAAZE00000007	gene	515908	518619	-
GWHAAZE00000007	mRNA	515908	518619	-
GWHAAZE00000007	exon	515908	517037	-
GWHAAZE00000007	exon	517766	518443	-
GWHAAZE00000007	exon	518553	518619	-
GWHAAZE00000007	CDS	518553	518619	-
GWHAAZE00000007	CDS	517766	518443	-
GWHAAZE00000007	CDS	515908	517037	-

Transcript Sequence
>GWHTAAZE023175 ATGGCCCAATTACGCCTTCTTCTAATTTCTTTTCTCACACTCATTATTCCCCACCTCTTCATATCAGGGGTACTTTCATCGGCAACATTTACACTGGTTAACAAATGCAATTACACAGTATGGCCAGGCATTTCATCCGGCGCAAAACTCCCCACCACCGGTTTTGCCCTCCAAAAAAATGAATTCAGGACCTTTAACGCTCCATCGTCCTGGGAAGGCTGCTTATGGGGTCGCACCCACTGTACCGTTGACTCCTCCGGAGACTTCTCCTGCCTCACCGGCGATTGTGGCTCTGGGAAAATTGAATGCACCGGCTCTGCCGTTGTTCCACCTGTTACAGTGGCTGAGTTCACTCTTAACAGCTTTAATGATACTGATTTTTATGACATCAGCCTTGTCAGTGGATACAACCTTCCTATGCTGATTGTACCTCAGGGTGGGACCGGAGTCAAATGTAGTAACGCGGGATGCATTTCAGACTTGAACGAGGCTTGTCCGCTGGAGTTGAAGGTGATGGGTATGACAGGAAAGGCGGTGGCGTGCAAGACTTACTCGGCATATTTCAAGGAGGAGTGCCCACACACTTACAGTCACGCCTCTGATGATTGCAAGACTTACTTGGCGTATTTCGAGGAGAAGTGCCCATACACTTACAATGACGCCTTTGATGACCAGACCAGCACCTTCAGCTGTGCTGGTGCGGATTACCTGATCACCTTCTGCCCCTCTGCAACTGATGAAACTATTGGTTTAACGGACACCAAGTTGGACCCAAGCACGCCCACGAAGTTAAGCGCTTCGTTTCTACCATCAGATATTCGGCGCTTTTCACTTGCTGAAATTAAATTTGGTACTAACAACTTCGACGACAATCTTGTGATTGGCGTTGGAGGATTTGGTAATGTGTATAAAGGTTGTTTAGACAACGGTGCAACCATCGTTGCAATCAAGCGGTTGAACGCTTTGTCTCATCAAGGTGTTTGTGAGTTTAAAACAGAGATCGAAATGCTATCCAAACTACGACATCTTCATCTTGTGTCCCTAATTGGATGCTGCGAGGATAATGGGGAAATGGTATTGGTTTATGATTATATGGTTAATGGTACGTTACGAGCCCATCTTTGCAAGCCGAATAATCCTCTATCATGGAAGCATCGTCTTCAAATATGTATTGGATCTGCACGGGGACTACAATATCTTCATACAAGTTCAAAGCAAAAAATTATTCATCGTGATGTGAAGTCCACCAACATTTTACTAGATGAAAGATGGGCGGCGAAGGTCTCCGATTTCGGTTTGTCCAAAATGGGACCCACCGGTGTGTCTCACACGCACGTGAGCACTGTGGTTAAGGGTACTTTCGGTTACTTGGACCCAGAGTACTTTCGACTACGAAGATTGACAGATAAGTCTGATGTGTACTCGTTTGGGGTGGTGTTATTCGAAGTGTTGTCTGGTAAGCTAGCAATTATTGAAGACATACCCGAGGAGCCAGTGAATTTGGCCGAGTGGGCTCGGTGTTGTTATGAAACGGGGGCCCTTGATGAAATTATTGATCTTCATGTACGGGACGAGATTGCACCAGAGTGTTTAAAGAAGTTTGCCGATGTAGCTTATAACTGTATCCAAGAACAAGGGATCAATCGCCCGTCGATGAGTGATGTGGTTTGGAGTCTGGAGCTTGCGCTGCAACTTCAAGAGGCTGCTGAGATTATGAGTGCTAATGGAGACGCGCTTGAGATCATGGAAAATTTTACGAATCTACCTTTCCATCTTGGAGAGGATGCCTTGACAGAGCATAATGATAGCTTGTCTAGGTCAATTGAATTACCGGGCTACTCTGGAAGCAGTGTCTCATTACCAAGCAGCAACTAA

Network for GWHGAAZE023145

Network category	Network	Top300 PCC genelist
Coexpression Positive	Network	Top300 PCC genelist
Coexpression Negative	Network	Top300 PCC genelist

Functional Module

Module ID	Function Annotation

Protein Structure

Pfam accession	Pfam name	Alignment start	Alignment end	E-value
PF00314.18	Thaumatin	34	242	1.70E-58
PF07714.18	PK_Tyr_Ser-Thr	293	557	7.00E-47

Protein Sequence

Gene family

Gene family	subfamily
Protein Kinases Family	RLK-Pelle_CrRLK1L-1

KEGG pathway

KO	Enzyme	pathway	mapID
--	--	--	--

Gene Ontology

GO term	Ontology	Name
GO:0006468	biological_process	protein phosphorylation
GO:0004672	molecular_function	protein kinase activity
GO:0005524	molecular_function	ATP binding

Expression pattern

Expression pattern detail

SRP	Sample	Description	TPM
SRP075780	SRR3591705	youngest leaf	0.000
	SRR3591706	second leaf	0.000
	SRR3591707	mature leaf	0.000
	SRR3591708	Shoot apex	0.000
	SRR3591709	Stem	0.000
	SRR3591710	White floral bud	3.171
	SRR3591711	White flower	4.132
	SRR3591712	Green floral bud	5.198
	SRR3591713	Yellow flower	0.479
SRP173429	SRR8316895	Juvenile bud stage	38.532
	SRR8316896	Juvenile bud stage	31.881
	SRR8316897	Juvenile bud stage	3.535
	SRR8316894	Third green stage	8.851
	SRR8316900	Third green stage	13.373
	SRR8316901	Third green stage	18.947
	SRR8316898	Complete white stage	0.869
	SRR8316899	Complete white stage	26.458
	SRR8316903	Complete white stage	0.893
	SRR8316902	Silver flowering stage	0.562
	SRR8316904	Silver flowering stage	0.617
	SRR8316905	Silver flowering stage	0.190
	SRR8316906	Gold flowering stage	1.853
	SRR8316907	Gold flowering stage	0.901
	SRR8316908	Gold flowering stage	0.523
SRP132670	SRR6706286	Control	6.166
	SRR6706287	Light intensity 50%	12.456
	SRR6706288	Light intensity 20%	8.369
CNP0000432	CNS0095592	Slightly white alabastrum(diploid) 1	17.660
	CNS0095593	Slightly white alabastrum(diploid) 2	20.254
	CNS0095594	Slightly white alabastrum(diploid) 3	20.676
	CNS0095595	Whole white alabastrum(diploid) 2	11.430
	CNS0095596	Whole white alabastrum(diploid) 3	3.209
	CNS0095597	Whole white alabastrum(diploid) 4	10.138
	CNS0095598	Silvery flower (diploied) 1	12.840
	CNS0095599	Silvery flower (diploied) 2	21.768
	CNS0095600	Silvery flower (diploied) 3	9.079
	CNS0095601	Golden flower (diploid) 1	19.810
	CNS0095602	Golden flower (diploid) 2	11.439
	CNS0095603	Golden flower (diploid) 3	11.441
	CNS0095604	Slightly white alabastrum(tetraploid) 1	2.076
	CNS0095605	Slightly white alabastrum(tetraploid) 2	1.697
	CNS0095606	Slightly white alabastrum(tetraploid) 3	6.969
	CNS0095607	Whole white alabastrum(tetraploid) 1	0.826
	CNS0095608	Whole white alabastrum(tetraploid) 2	0.315
	CNS0095609	Whole white alabastrum(tetraploid) 3	2.186
	CNS0095610	Silvery flower (tetraploid) 1	0.522
	CNS0095611	Silvery flower (tetraploid) 2	0.167
	CNS0095612	Silvery flower (tetraploid) 3	0.486
	CNS0095613	Golden flower (tetraploid) 1	0.168
	CNS0095614	Golden flower (tetraploid) 2	0.165
	CNS0095615	Golden flower (tetraploid) 3	0.019
CRA001975	CRR073297	Stem 1	11.242
	CRR073298	Stem 2	10.513
	CRR073299	Stem 3	4.786
	CRR073300	Leaf 1	17.248
	CRR073301	Leaf 2	18.153
	CRR073302	Leaf 3	8.513
	CRR073303	Juvenile bud 1	6.021
	CRR073304	Juvenile bud 2	4.690
	CRR073305	Juvenile bud 3	5.744
	CRR073306	Third green 1	1.007
	CRR073307	Third green 2	0.301
	CRR073308	Third green 3	0.994
	CRR073309	Second white 1	0.280
	CRR073310	Second white 2	0.280
	CRR073311	Second white 3	0.265
	CRR073312	Silver flowering 1	0.626
	CRR073313	Silver flowering 2	0.386
	CRR073314	Silver flowering 3	0.539
	CRR073315	Gold flowering 1	9.342
	CRR073316	Gold flowering 2	18.472
	CRR073317	Gold flowering 3	13.737
	CRR073318	Tawny withering 1	3.305
	CRR073319	Tawny withering 2	10.154
	CRR073320	Tawny withering 3	1.241